RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 FAM19A3Q7Z5A8 133 aa4.68□□□□□ -1.66
SMAD1-213ENST00000514778 BAGE3Q86Y29 109 aa4.68□□□□□ -1.66
SMAD1-213ENST00000514778 MAPKAPK5-AS1Q8N8E1 139 aa4.68□□□□□ -1.66
SMAD1-213ENST00000514778 URB1-AS1Q96HZ7 61 aa4.68□□□□□ -1.66
SMAD1-213ENST00000514778 SCGB3A1Q96QR1 104 aa4.68□□□□□ -1.66
SMAD1-213ENST00000514778 RYR2Q92736 4967 aa4.67□□□□□ -1.66
SMAD1-213ENST00000514778 IGLV10-54A0A075B6I4 117 aa4.67□□□□□ -1.66
SMAD1-213ENST00000514778 GAGE12HA6NDE8 117 aa4.67□□□□□ -1.66
SMAD1-213ENST00000514778 IFITM10A6NMD0 228 aa4.67□□□□□ -1.66
SMAD1-213ENST00000514778 FOXI1Q12951 378 aa4.67□□□□□ -1.66
SMAD1-213ENST00000514778 PDZD11Q5EBL8 140 aa4.67□□□□□ -1.66
SMAD1-213ENST00000514778 LINC01561Q8N1V8 128 aa4.67□□□□□ -1.66
SMAD1-213ENST00000514778 BAALCQ8WXS3 180 aa4.67□□□□□ -1.66
SMAD1-213ENST00000514778 RYR3Q15413 4870 aa4.67□□□□□ -1.66
SMAD1-213ENST00000514778 DNAH2Q9P225 4427 aa4.66□□□□□ -1.66
SMAD1-213ENST00000514778 HYDINQ4G0P3 5121 aa4.66□□□□□ -1.66
SMAD1-213ENST00000514778 A0A096LNJ9 63 aa4.66□□□□□ -1.66
SMAD1-213ENST00000514778 TRAV13-1A0A0B4J241 112 aa4.66□□□□□ -1.66
SMAD1-213ENST00000514778 IGHV3OR16-9A0A0B4J2B5 98 aa4.66□□□□□ -1.66
SMAD1-213ENST00000514778 IGHV1-58A0A0C4DH39 117 aa4.66□□□□□ -1.66
SMAD1-213ENST00000514778 IGKV3OR2-268A0A0C4DH90 116 aa4.66□□□□□ -1.66
SMAD1-213ENST00000514778 USP17L23D6RBM5 183 aa4.66□□□□□ -1.66
SMAD1-213ENST00000514778 F8WDY8 70 aa4.66□□□□□ -1.66
SMAD1-213ENST00000514778 COX7A2LO14548 114 aa4.66□□□□□ -1.66
SMAD1-213ENST00000514778 HSBP1O75506 76 aa4.66□□□□□ -1.66
SMAD1-213ENST00000514778 APOMO95445 188 aa4.66□□□□□ -1.66
SMAD1-213ENST00000514778 XCL1P47992 114 aa4.66□□□□□ -1.66
SMAD1-213ENST00000514778 UBE2D1P51668 147 aa4.66□□□□□ -1.66
SMAD1-213ENST00000514778 SPATA12Q7Z6I5 190 aa4.66□□□□□ -1.66
SMAD1-213ENST00000514778 GVQW2A0A096LPI5 108 aaPredicted RBP4.65□□□□□ -1.67
SMAD1-213ENST00000514778 HIST1H2BKO60814 126 aa4.65□□□□□ -1.67
SMAD1-213ENST00000514778 HIST1H2BJP06899 126 aa4.65□□□□□ -1.67
SMAD1-213ENST00000514778 HIST1H2BOP23527 126 aa4.65□□□□□ -1.67
SMAD1-213ENST00000514778 HIST1H2BBP33778 126 aa4.65□□□□□ -1.67
SMAD1-213ENST00000514778 HIST1H2BDP58876 126 aa4.65□□□□□ -1.67
SMAD1-213ENST00000514778 CNBPP62633 177 aaKnown RBP4.65□□□□□ -1.67
SMAD1-213ENST00000514778 HIST1H2BCP62807 126 aa4.65□□□□□ -1.67
SMAD1-213ENST00000514778 HERVK_113P63121 156 aa4.65□□□□□ -1.67
SMAD1-213ENST00000514778 PMVKQ15126 192 aa4.65□□□□□ -1.67
SMAD1-213ENST00000514778 HIST2H2BEQ16778 126 aa4.65□□□□□ -1.67
SMAD1-213ENST00000514778 COA6Q5JTJ3 125 aaKnown RBP4.65□□□□□ -1.67
SMAD1-213ENST00000514778 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.65□□□□□ -1.67
SMAD1-213ENST00000514778 LINC00242Q5T6M2 205 aa4.65□□□□□ -1.67
SMAD1-213ENST00000514778 LINC00173Q6ZV60 143 aa4.65□□□□□ -1.67
SMAD1-213ENST00000514778 HIST1H2BHQ93079 126 aa4.65□□□□□ -1.67
SMAD1-213ENST00000514778 PACRGQ96M98 296 aaPredicted RBP4.65□□□□□ -1.67
SMAD1-213ENST00000514778 HIST1H2BNQ99877 126 aa4.65□□□□□ -1.67
SMAD1-213ENST00000514778 HIST1H2BMQ99879 126 aa4.65□□□□□ -1.67
SMAD1-213ENST00000514778 OPRPNQ99935 248 aaPredicted RBP4.65□□□□□ -1.67
SMAD1-213ENST00000514778 CST9LQ9H4G1 147 aa4.65□□□□□ -1.67
SMAD1-213ENST00000514778 A0A087WZ39 114 aa4.64□□□□□ -1.67
SMAD1-213ENST00000514778 IGLV5-52A0A0A0MRZ9 124 aa4.64□□□□□ -1.67
SMAD1-213ENST00000514778 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.64□□□□□ -1.67
SMAD1-213ENST00000514778 TRAV12-1A0A0B4J245 112 aa4.64□□□□□ -1.67
SMAD1-213ENST00000514778 TINCRA0A1B0GVN0 87 aa4.64□□□□□ -1.67
SMAD1-213ENST00000514778 MALP21145 153 aa4.64□□□□□ -1.67
SMAD1-213ENST00000514778 WFDC2Q14508 124 aa4.64□□□□□ -1.67
SMAD1-213ENST00000514778 RNASE13Q5GAN3 156 aaKnown RBP4.64□□□□□ -1.67
SMAD1-213ENST00000514778 OR10D4PQ8NGN7 298 aa4.64□□□□□ -1.67
SMAD1-213ENST00000514778 PKIGQ9Y2B9 76 aa4.64□□□□□ -1.67
SMAD1-213ENST00000514778 IGHV3-64A0A075B6Q5 118 aa4.63□□□□□ -1.67
SMAD1-213ENST00000514778 IGLV5-45A0A087WSX0 123 aa4.63□□□□□ -1.67
SMAD1-213ENST00000514778 hDV102S1A0JD36 115 aa4.63□□□□□ -1.67
SMAD1-213ENST00000514778 C16orf90A8MZG2 172 aa4.63□□□□□ -1.67
SMAD1-213ENST00000514778 SERF1AO75920 110 aa4.63□□□□□ -1.67
SMAD1-213ENST00000514778 LEPROTL1O95214 131 aa4.63□□□□□ -1.67
SMAD1-213ENST00000514778 PRSS1P07477 247 aa4.63□□□□□ -1.67
SMAD1-213ENST00000514778 GCSHP23434 173 aa4.63□□□□□ -1.67
SMAD1-213ENST00000514778 C15orf56Q8N910 161 aa4.63□□□□□ -1.67
SMAD1-213ENST00000514778 IFI27L1Q96BM0 104 aa4.63□□□□□ -1.67
SMAD1-213ENST00000514778 GEMIN7Q9H840 131 aaKnown RBP4.63□□□□□ -1.67
SMAD1-213ENST00000514778 HSPB8Q9UJY1 196 aa4.63□□□□□ -1.67
SMAD1-213ENST00000514778 C9orf118A6NHY6 69 aa4.62□□□□□ -1.67
SMAD1-213ENST00000514778 ZNF561-AS1K7EIQ3 104 aa4.62□□□□□ -1.67
SMAD1-213ENST00000514778 LECT2O14960 151 aa4.62□□□□□ -1.67
SMAD1-213ENST00000514778 IGLC3P0DOY3 106 aa4.62□□□□□ -1.67
SMAD1-213ENST00000514778 C9orf163Q8N9P6 203 aa4.62□□□□□ -1.67
SMAD1-213ENST00000514778 C2orf48Q96LS8 159 aa4.62□□□□□ -1.67
SMAD1-213ENST00000514778 KRTAP3-1Q9BYR8 98 aa4.62□□□□□ -1.67
SMAD1-213ENST00000514778 FAT2Q9NYQ8 4349 aa4.62□□□□□ -1.67
SMAD1-213ENST00000514778 DNAH17Q9UFH2 4485 aa4.62□□□□□ -1.67
SMAD1-213ENST00000514778 FRAS1Q86XX4 4008 aa4.62□□□□□ -1.67
SMAD1-213ENST00000514778 PKD1P98161 4303 aa4.61□□□□□ -1.67
SMAD1-213ENST00000514778 H3BRM9 83 aa4.61□□□□□ -1.67
SMAD1-213ENST00000514778 CDK2AP2O75956 126 aa4.61□□□□□ -1.67
SMAD1-213ENST00000514778 COX6A2Q02221 97 aa4.61□□□□□ -1.67
SMAD1-213ENST00000514778 PMCHL1Q16048 86 aa4.61□□□□□ -1.67
SMAD1-213ENST00000514778 RNF151Q2KHN1 245 aa4.61□□□□□ -1.67
SMAD1-213ENST00000514778 C5orf38Q86SI9 138 aa4.61□□□□□ -1.67
SMAD1-213ENST00000514778 FAM19A2Q8N3H0 131 aa4.61□□□□□ -1.67
SMAD1-213ENST00000514778 DNAH10Q8IVF4 4471 aa4.61□□□□□ -1.67
SMAD1-213ENST00000514778 HECTD4Q9Y4D8 3996 aa4.6□□□□□ -1.67
SMAD1-213ENST00000514778 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.6□□□□□ -1.67
SMAD1-213ENST00000514778 A0A0J9YXV3 536 aa4.6□□□□□ -1.67
SMAD1-213ENST00000514778 NUPR1O60356 82 aa4.6□□□□□ -1.67
SMAD1-213ENST00000514778 ZC2HC1BQ5TFG8 222 aa4.6□□□□□ -1.67
SMAD1-213ENST00000514778 CDKN2A-AS1Q9UH64 79 aa4.6□□□□□ -1.67
SMAD1-213ENST00000514778 IGLV4-69A0A075B6H9 119 aa4.59□□□□□ -1.67
SMAD1-213ENST00000514778 F8VRH5 84 aa4.59□□□□□ -1.67
SMAD1-213ENST00000514778 SLPIP03973 132 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms