RNA–Protein interactions for RNA: ENST00000514308.3

PDLIM3-210, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-210ENST00000514308 FGF6P10767 208 aa8.89□□□□□ -0.99
PDLIM3-210ENST00000514308 ZC2HC1BQ5TFG8 222 aa8.89□□□□□ -0.99
PDLIM3-210ENST00000514308 DAZ4Q86SG3 579 aaKnown RBP8.89□□□□□ -0.99
PDLIM3-210ENST00000514308 DAZ3Q9NR90 486 aaKnown RBP8.89□□□□□ -0.99
PDLIM3-210ENST00000514308 CHCHD7Q9BUK0 85 aa8.88□□□□□ -0.99
PDLIM3-210ENST00000514308 TIMM21Q9BVV7 248 aa8.88□□□□□ -0.99
PDLIM3-210ENST00000514308 Q9HAA7 133 aa8.88□□□□□ -0.99
PDLIM3-210ENST00000514308 SPANXA1Q9NS26 97 aa8.88□□□□□ -0.99
PDLIM3-210ENST00000514308 Q9UF83 564 aa8.88□□□□□ -0.99
PDLIM3-210ENST00000514308 UBE2D3P61077 147 aa8.87□□□□□ -0.99
PDLIM3-210ENST00000514308 UBE2D2P62837 147 aa8.87□□□□□ -0.99
PDLIM3-210ENST00000514308 SMAGPQ0VAQ4 97 aa8.87□□□□□ -0.99
PDLIM3-210ENST00000514308 LRP1BQ9NZR2 4599 aa8.87□□□□□ -0.99
PDLIM3-210ENST00000514308 MAPKAPK5-AS1Q8N8E1 139 aa8.86□□□□□ -0.99
PDLIM3-210ENST00000514308 AMELXQ99217 191 aa8.86□□□□□ -0.99
PDLIM3-210ENST00000514308 VCX2Q9H322 139 aa8.86□□□□□ -0.99
PDLIM3-210ENST00000514308 IGLV4-69A0A075B6H9 119 aa8.85□□□□□ -0.99
PDLIM3-210ENST00000514308 IGLV4-3A0A075B6K6 122 aa8.85□□□□□ -0.99
PDLIM3-210ENST00000514308 NMUP48645 174 aa8.85□□□□□ -0.99
PDLIM3-210ENST00000514308 COL5A1-AS1Q5SY13 56 aa8.85□□□□□ -0.99
PDLIM3-210ENST00000514308 C2orf91Q6ZV80 131 aa8.85□□□□□ -0.99
PDLIM3-210ENST00000514308 DEFB104AQ8WTQ1 72 aa8.85□□□□□ -0.99
PDLIM3-210ENST00000514308 TM2D2Q9BX73 214 aa8.85□□□□□ -0.99
PDLIM3-210ENST00000514308 HIGD1BQ9P298 99 aa8.85□□□□□ -0.99
PDLIM3-210ENST00000514308 IGKV2D-26A0A0A0MRZ7 120 aa8.84□□□□□ -0.99
PDLIM3-210ENST00000514308 TRAV8-3A0A0A6YYJ7 113 aa8.84□□□□□ -0.99
PDLIM3-210ENST00000514308 E9PLD3 99 aa8.84□□□□□ -0.99
PDLIM3-210ENST00000514308 FUSP35637 526 aaKnown RBP eCLIP8.84□□□□□ -0.99
PDLIM3-210ENST00000514308 MRPS36P82909 103 aaKnown RBP8.84□□□□□ -0.99
PDLIM3-210ENST00000514308 TMEM97Q5BJF2 176 aa8.84□□□□□ -0.99
PDLIM3-210ENST00000514308 UBE2D4Q9Y2X8 147 aa8.84□□□□□ -0.99
PDLIM3-210ENST00000514308 C11orf86A6NJI1 115 aa8.83□□□□□ -1
PDLIM3-210ENST00000514308 H7C423 109 aa8.83□□□□□ -1
PDLIM3-210ENST00000514308 HERVK_113P61574 105 aa8.83□□□□□ -1
PDLIM3-210ENST00000514308 PCP2Q8IVA1 136 aa8.83□□□□□ -1
PDLIM3-210ENST00000514308 Q8N3U1 123 aa8.83□□□□□ -1
PDLIM3-210ENST00000514308 CSDC2Q9Y534 153 aaKnown RBP8.83□□□□□ -1
PDLIM3-210ENST00000514308 LRCOL1A6NCL2 159 aa8.82□□□□□ -1
PDLIM3-210ENST00000514308 HINT1P49773 126 aaPredicted RBP8.82□□□□□ -1
PDLIM3-210ENST00000514308 FAM104AQ969W3 186 aa8.82□□□□□ -1
PDLIM3-210ENST00000514308 OPRPNQ99935 248 aaPredicted RBP8.82□□□□□ -1
PDLIM3-210ENST00000514308 HSPG2P98160 4391 aa8.82□□□□□ -1
PDLIM3-210ENST00000514308 RYR1P21817 5038 aa8.81□□□□□ -1
PDLIM3-210ENST00000514308 HSD52Q0P140 79 aa8.81□□□□□ -1
PDLIM3-210ENST00000514308 MPV17L2Q567V2 206 aa8.81□□□□□ -1
PDLIM3-210ENST00000514308 BVES-AS1Q5T3Y7 98 aa8.81□□□□□ -1
PDLIM3-210ENST00000514308 NTN5Q8WTR8 489 aaPredicted RBP8.81□□□□□ -1
PDLIM3-210ENST00000514308 RMI2Q96E14 147 aa8.81□□□□□ -1
PDLIM3-210ENST00000514308 COX11Q9Y6N1 276 aa8.81□□□□□ -1
PDLIM3-210ENST00000514308 IGLV5-52A0A0A0MRZ9 124 aa8.8□□□□□ -1
PDLIM3-210ENST00000514308 TRBV6-8A0A0A6YYG3 113 aa8.8□□□□□ -1
PDLIM3-210ENST00000514308 GCSHP23434 173 aa8.8□□□□□ -1
PDLIM3-210ENST00000514308 BATFQ16520 125 aa8.8□□□□□ -1
PDLIM3-210ENST00000514308 DGAT2L7PQ6IED9 249 aa8.8□□□□□ -1
PDLIM3-210ENST00000514308 NTM-AS1Q6ZSK4 140 aa8.8□□□□□ -1
PDLIM3-210ENST00000514308 Q8N1X5 172 aa8.8□□□□□ -1
PDLIM3-210ENST00000514308 Q8N814 137 aa8.8□□□□□ -1
PDLIM3-210ENST00000514308 DNAH5Q8TE73 4624 aa8.8□□□□□ -1
PDLIM3-210ENST00000514308 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.79□□□□□ -1
PDLIM3-210ENST00000514308 A0A1B0GV90 55 aa8.79□□□□□ -1
PDLIM3-210ENST00000514308 IGKV2-29A2NJV5 120 aaPredicted RBP8.79□□□□□ -1
PDLIM3-210ENST00000514308 TMEM262E9PQX1 116 aa8.79□□□□□ -1
PDLIM3-210ENST00000514308 TAL2Q16559 108 aa8.79□□□□□ -1
PDLIM3-210ENST00000514308 CHAC1Q9BUX1 264 aa8.79□□□□□ -1
PDLIM3-210ENST00000514308 TP73-AS1Q9UF72 201 aa8.79□□□□□ -1
PDLIM3-210ENST00000514308 KLK12Q9UKR0 248 aa8.79□□□□□ -1
PDLIM3-210ENST00000514308 PCLOQ9Y6V0 5065 aa8.78□□□□□ -1
PDLIM3-210ENST00000514308 TRBV25-1A0A075B6N4 114 aa8.78□□□□□ -1
PDLIM3-210ENST00000514308 A0A0J9YXV3 536 aa8.78□□□□□ -1
PDLIM3-210ENST00000514308 MYMXA0A1B0GTQ4 84 aa8.78□□□□□ -1
PDLIM3-210ENST00000514308 TINCRA0A1B0GVN0 87 aa8.78□□□□□ -1
PDLIM3-210ENST00000514308 TMEM223A0PJW6 202 aa8.78□□□□□ -1
PDLIM3-210ENST00000514308 KRTAP10-1P60331 282 aa8.78□□□□□ -1
PDLIM3-210ENST00000514308 SEC11AP67812 179 aa8.78□□□□□ -1
PDLIM3-210ENST00000514308 TMEM170BQ5T4T1 132 aa8.78□□□□□ -1
PDLIM3-210ENST00000514308 FAM19A3Q7Z5A8 133 aa8.78□□□□□ -1
PDLIM3-210ENST00000514308 TMEM243Q9BU79 118 aa8.78□□□□□ -1
PDLIM3-210ENST00000514308 KRTAP4-5Q9BYR2 181 aa8.78□□□□□ -1
PDLIM3-210ENST00000514308 APOBP04114 4563 aaKnown RBP8.77□□□□□ -1.01
PDLIM3-210ENST00000514308 ZNF22P17026 224 aaPredicted RBP8.77□□□□□ -1.01
PDLIM3-210ENST00000514308 UBE2WQ96B02 151 aa8.77□□□□□ -1.01
PDLIM3-210ENST00000514308 CHCHD5Q9BSY4 110 aa8.77□□□□□ -1.01
PDLIM3-210ENST00000514308 IGKV2D-24A0A075B6R9 120 aa8.76□□□□□ -1.01
PDLIM3-210ENST00000514308 LEPROTO15243 131 aa8.76□□□□□ -1.01
PDLIM3-210ENST00000514308 ZNF25P17030 456 aaPredicted RBP8.76□□□□□ -1.01
PDLIM3-210ENST00000514308 Q6ZUT4 128 aa8.76□□□□□ -1.01
PDLIM3-210ENST00000514308 ORAOV1Q8WV07 137 aa8.76□□□□□ -1.01
PDLIM3-210ENST00000514308 PLEKHB2Q96CS7 222 aa8.76□□□□□ -1.01
PDLIM3-210ENST00000514308 TTTY13Q9BZ97 58 aa8.76□□□□□ -1.01
PDLIM3-210ENST00000514308 UBE2L6O14933 153 aa8.75□□□□□ -1.01
PDLIM3-210ENST00000514308 LECT2O14960 151 aa8.75□□□□□ -1.01
PDLIM3-210ENST00000514308 CRPP02741 224 aa8.75□□□□□ -1.01
PDLIM3-210ENST00000514308 UBE2D1P51668 147 aa8.75□□□□□ -1.01
PDLIM3-210ENST00000514308 OR5A1Q8NGJ0 315 aa8.75□□□□□ -1.01
PDLIM3-210ENST00000514308 TMEM101Q96IK0 257 aa8.75□□□□□ -1.01
PDLIM3-210ENST00000514308 CDC42SE2Q9NRR3 84 aa8.75□□□□□ -1.01
PDLIM3-210ENST00000514308 IGLV5-45A0A087WSX0 123 aa8.74□□□□□ -1.01
PDLIM3-210ENST00000514308 A6NDN8 102 aa8.74□□□□□ -1.01
PDLIM3-210ENST00000514308 XGP55808 180 aa8.74□□□□□ -1.01
PDLIM3-210ENST00000514308 AMMECR1LQ6DCA0 310 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms