RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 K7ERJ3 54 aa10.35□□□□□ -0.75
VCAN-211ENST00000513984 VAMP3Q15836 100 aa10.35□□□□□ -0.75
VCAN-211ENST00000513984 MRPL23Q16540 153 aaKnown RBP10.35□□□□□ -0.75
VCAN-211ENST00000513984 TMEM238C9JI98 176 aa10.35□□□□□ -0.75
VCAN-211ENST00000513984 HTN3P15516 51 aa10.35□□□□□ -0.75
VCAN-211ENST00000513984 UBE2V1Q13404 147 aa10.35□□□□□ -0.75
VCAN-211ENST00000513984 SH2D6Q7Z4S9 175 aa10.35□□□□□ -0.75
VCAN-211ENST00000513984 H3BUT2 72 aa10.34□□□□□ -0.75
VCAN-211ENST00000513984 RBX1P62877 108 aa10.34□□□□□ -0.75
VCAN-211ENST00000513984 ICOSQ9Y6W8 199 aa10.34□□□□□ -0.75
VCAN-211ENST00000513984 NDUFA1O15239 70 aa10.33□□□□□ -0.76
VCAN-211ENST00000513984 TMEM262E9PQX1 116 aa10.33□□□□□ -0.76
VCAN-211ENST00000513984 LITAFQ99732 161 aa10.33□□□□□ -0.76
VCAN-211ENST00000513984 LINC00959A0A1B0GUT2 108 aa10.31□□□□□ -0.76
VCAN-211ENST00000513984 CCL25O15444 150 aa10.31□□□□□ -0.76
VCAN-211ENST00000513984 NAA38Q9BRA0 125 aaKnown RBP10.31□□□□□ -0.76
VCAN-211ENST00000513984 IGHV3OR16-9A0A0B4J2B5 98 aa10.3□□□□□ -0.76
VCAN-211ENST00000513984 IGKV3OR2-268A0A0C4DH90 116 aa10.3□□□□□ -0.76
VCAN-211ENST00000513984 A0A1W2PPM0 123 aa10.3□□□□□ -0.76
VCAN-211ENST00000513984 H3BNG1 76 aa10.3□□□□□ -0.76
VCAN-211ENST00000513984 TIMM17BO60830 172 aa10.3□□□□□ -0.76
VCAN-211ENST00000513984 SPANXDQ9BXN6 97 aa10.3□□□□□ -0.76
VCAN-211ENST00000513984 SPANXCQ9NY87 97 aa10.3□□□□□ -0.76
VCAN-211ENST00000513984 NOTCH1P46531 2555 aa10.29□□□□□ -0.76
VCAN-211ENST00000513984 IGLL5B9A064 214 aa10.29□□□□□ -0.76
VCAN-211ENST00000513984 LELP1Q5T871 98 aa10.29□□□□□ -0.76
VCAN-211ENST00000513984 Q9H8V8 135 aa10.28□□□□□ -0.76
VCAN-211ENST00000513984 TENM3Q9P273 2699 aa10.28□□□□□ -0.76
VCAN-211ENST00000513984 A0A087WZ39 114 aa10.28□□□□□ -0.76
VCAN-211ENST00000513984 A0A0J9YWU9 116 aa10.28□□□□□ -0.76
VCAN-211ENST00000513984 RPL24P83731 157 aaKnown RBP10.28□□□□□ -0.76
VCAN-211ENST00000513984 KPRPQ5T749 579 aaPredicted RBP10.28□□□□□ -0.76
VCAN-211ENST00000513984 Q6ZTC4 211 aa10.28□□□□□ -0.76
VCAN-211ENST00000513984 ZNF625Q96I27 306 aaPredicted RBP10.28□□□□□ -0.76
VCAN-211ENST00000513984 FABP2P12104 132 aa10.27□□□□□ -0.77
VCAN-211ENST00000513984 SS18Q15532 418 aa10.27□□□□□ -0.77
VCAN-211ENST00000513984 ADAMTSL4-AS1Q5T5F5 129 aa10.27□□□□□ -0.77
VCAN-211ENST00000513984 MUSTN1Q8IVN3 82 aa10.27□□□□□ -0.77
VCAN-211ENST00000513984 K7EIL1 84 aa10.26□□□□□ -0.77
VCAN-211ENST00000513984 K7EP34 96 aa10.26□□□□□ -0.77
VCAN-211ENST00000513984 CFC1BP0CG36 223 aa10.26□□□□□ -0.77
VCAN-211ENST00000513984 CFC1P0CG37 223 aa10.26□□□□□ -0.77
VCAN-211ENST00000513984 MIAQ16674 131 aa10.26□□□□□ -0.77
VCAN-211ENST00000513984 A4D1N5 150 aa10.26□□□□□ -0.77
VCAN-211ENST00000513984 GAGE10A6NGK3 116 aa10.26□□□□□ -0.77
VCAN-211ENST00000513984 PRB2P02812 416 aaPredicted RBP10.26□□□□□ -0.77
VCAN-211ENST00000513984 GTF2H5Q6ZYL4 71 aa10.26□□□□□ -0.77
VCAN-211ENST00000513984 SPATA25Q9BR10 227 aa10.26□□□□□ -0.77
VCAN-211ENST00000513984 APOMO95445 188 aa10.25□□□□□ -0.77
VCAN-211ENST00000513984 HERV-K104P63124 156 aa10.25□□□□□ -0.77
VCAN-211ENST00000513984 COX7B2Q8TF08 81 aa10.25□□□□□ -0.77
VCAN-211ENST00000513984 TM2D3Q9BRN9 247 aa10.25□□□□□ -0.77
VCAN-211ENST00000513984 LYPD5Q6UWN5 251 aa10.24□□□□□ -0.77
VCAN-211ENST00000513984 LINC00269Q8N2A0 174 aa10.24□□□□□ -0.77
VCAN-211ENST00000513984 Q8N3U1 123 aa10.24□□□□□ -0.77
VCAN-211ENST00000513984 PGPEP1Q9NXJ5 209 aa10.24□□□□□ -0.77
VCAN-211ENST00000513984 NBEAL1Q6ZS30 2694 aa10.24□□□□□ -0.77
VCAN-211ENST00000513984 A0A0B4J2C4 111 aa10.23□□□□□ -0.77
VCAN-211ENST00000513984 ANGP03950 147 aaKnown RBP10.23□□□□□ -0.77
VCAN-211ENST00000513984 CIRBPQ14011 172 aaKnown RBP10.23□□□□□ -0.77
VCAN-211ENST00000513984 CLPSL2Q6UWE3 100 aa10.23□□□□□ -0.77
VCAN-211ENST00000513984 LINC01561Q8N1V8 128 aa10.23□□□□□ -0.77
VCAN-211ENST00000513984 C11orf45Q8TAV5 145 aa10.23□□□□□ -0.77
VCAN-211ENST00000513984 MDFIQ99750 246 aa10.23□□□□□ -0.77
VCAN-211ENST00000513984 SPCS1Q9Y6A9 102 aa10.23□□□□□ -0.77
VCAN-211ENST00000513984 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.23□□□□□ -0.77
VCAN-211ENST00000513984 IFITM1P13164 125 aa10.23□□□□□ -0.77
VCAN-211ENST00000513984 REG3AQ06141 175 aa10.23□□□□□ -0.77
VCAN-211ENST00000513984 C5orf38Q86SI9 138 aa10.23□□□□□ -0.77
VCAN-211ENST00000513984 EIF4EBP3O60516 100 aaPredicted RBP10.22□□□□□ -0.77
VCAN-211ENST00000513984 PRSS2P07478 247 aa10.22□□□□□ -0.77
VCAN-211ENST00000513984 XCL1P47992 114 aa10.22□□□□□ -0.77
VCAN-211ENST00000513984 NANOS2P60321 138 aaKnown RBP10.22□□□□□ -0.77
VCAN-211ENST00000513984 TSPAN13O95857 204 aa10.21□□□□□ -0.77
VCAN-211ENST00000513984 PRO1854Q9UHT4 67 aa10.21□□□□□ -0.77
VCAN-211ENST00000513984 CD164L2Q6UWJ8 174 aa10.21□□□□□ -0.78
VCAN-211ENST00000513984 DEFB131BA0A096LNP1 70 aa10.2□□□□□ -0.78
VCAN-211ENST00000513984 CHCHD10Q8WYQ3 142 aaPredicted RBP10.2□□□□□ -0.78
VCAN-211ENST00000513984 TOMM7Q9P0U1 55 aa10.2□□□□□ -0.78
VCAN-211ENST00000513984 MEIG1Q5JSS6 88 aa10.19□□□□□ -0.78
VCAN-211ENST00000513984 DAND5Q8N907 189 aa10.19□□□□□ -0.78
VCAN-211ENST00000513984 PRR34Q9NV39 138 aa10.19□□□□□ -0.78
VCAN-211ENST00000513984 DEFB121Q5J5C9 76 aa10.19□□□□□ -0.78
VCAN-211ENST00000513984 SFTA2Q6UW10 78 aa10.19□□□□□ -0.78
VCAN-211ENST00000513984 LINC00308Q8TCZ7 52 aa10.18□□□□□ -0.78
VCAN-211ENST00000513984 PPDPFQ9H3Y8 114 aa10.18□□□□□ -0.78
VCAN-211ENST00000513984 MGAM2Q2M2H8 2515 aa10.17□□□□□ -0.78
VCAN-211ENST00000513984 IGHV3-33P01772 117 aa10.17□□□□□ -0.78
VCAN-211ENST00000513984 NPC2P61916 151 aa10.17□□□□□ -0.78
VCAN-211ENST00000513984 Q8IZM0 81 aa10.17□□□□□ -0.78
VCAN-211ENST00000513984 COPS9Q8WXC6 57 aa10.17□□□□□ -0.78
VCAN-211ENST00000513984 HUWE1Q7Z6Z7 4374 aaKnown RBP10.17□□□□□ -0.78
VCAN-211ENST00000513984 COX7A2LO14548 114 aa10.17□□□□□ -0.78
VCAN-211ENST00000513984 MRAPQ8TCY5 172 aa10.17□□□□□ -0.78
VCAN-211ENST00000513984 IGLV10-54A0A075B6I4 117 aa10.16□□□□□ -0.78
VCAN-211ENST00000513984 A0A0U1RRA0 63 aa10.15□□□□□ -0.78
VCAN-211ENST00000513984 FOXI1Q12951 378 aa10.15□□□□□ -0.78
VCAN-211ENST00000513984 WFDC10BQ8IUB3 73 aa10.15□□□□□ -0.78
VCAN-211ENST00000513984 KLK12Q9UKR0 248 aa10.15□□□□□ -0.78
VCAN-211ENST00000513984 TRAV10A0A0B4J240 114 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms