RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 FUSP35637 526 aaKnown RBP eCLIP5.63□□□□□ -1.51
CLCN3-209ENST00000513761 Q6ZSN1 163 aa5.63□□□□□ -1.51
CLCN3-209ENST00000513761 WFDC10AQ9H1F0 79 aa5.63□□□□□ -1.51
CLCN3-209ENST00000513761 Q6YL49 198 aa5.63□□□□□ -1.51
CLCN3-209ENST00000513761 FAM222AQ5U5X8 452 aa5.63□□□□□ -1.51
CLCN3-209ENST00000513761 CCL18P55774 89 aa5.63□□□□□ -1.51
CLCN3-209ENST00000513761 BRK1Q8WUW1 75 aa5.63□□□□□ -1.51
CLCN3-209ENST00000513761 CHCHD10Q8WYQ3 142 aaPredicted RBP5.63□□□□□ -1.51
CLCN3-209ENST00000513761 CDC42SE2Q9NRR3 84 aa5.63□□□□□ -1.51
CLCN3-209ENST00000513761 REG3AQ06141 175 aa5.62□□□□□ -1.51
CLCN3-209ENST00000513761 LINC00526Q96FQ7 95 aa5.62□□□□□ -1.51
CLCN3-209ENST00000513761 DNAH14Q0VDD8 3507 aa5.62□□□□□ -1.51
CLCN3-209ENST00000513761 CDH23Q9H251 3354 aa5.62□□□□□ -1.51
CLCN3-209ENST00000513761 SNURFQ9Y675 71 aa5.62□□□□□ -1.51
CLCN3-209ENST00000513761 UBE2BP63146 152 aa5.62□□□□□ -1.51
CLCN3-209ENST00000513761 HIGD2BQ4VC39 106 aa5.62□□□□□ -1.51
CLCN3-209ENST00000513761 XAGE1AQ9HD64 81 aa5.62□□□□□ -1.51
CLCN3-209ENST00000513761 A0A087WYN8 130 aa5.62□□□□□ -1.51
CLCN3-209ENST00000513761 LINC00315P59091 139 aa5.62□□□□□ -1.51
CLCN3-209ENST00000513761 ZNF702PQ9H963 129 aa5.62□□□□□ -1.51
CLCN3-209ENST00000513761 PCSK5Q92824 1860 aa5.62□□□□□ -1.51
CLCN3-209ENST00000513761 SPART-AS1P0CW21 52 aa5.61□□□□□ -1.51
CLCN3-209ENST00000513761 COX7BP24311 80 aa5.61□□□□□ -1.51
CLCN3-209ENST00000513761 DEFB121Q5J5C9 76 aa5.61□□□□□ -1.51
CLCN3-209ENST00000513761 MPLKIPQ8TAP9 179 aa5.61□□□□□ -1.51
CLCN3-209ENST00000513761 ETDCA0A1B0GVM5 59 aa5.61□□□□□ -1.51
CLCN3-209ENST00000513761 DNAJC9-AS1A6NH13 148 aa5.61□□□□□ -1.51
CLCN3-209ENST00000513761 XIRP2A4UGR9 3374 aa5.61□□□□□ -1.51
CLCN3-209ENST00000513761 LOC107984640A0A0U1RRK4 108 aa5.61□□□□□ -1.51
CLCN3-209ENST00000513761 TRBV6-4A0A1B0GX49 114 aa5.61□□□□□ -1.51
CLCN3-209ENST00000513761 UBE2DNLQ8IWF7 75 aa5.61□□□□□ -1.51
CLCN3-209ENST00000513761 FAM110AQ9BQ89 295 aa5.61□□□□□ -1.51
CLCN3-209ENST00000513761 ATP5EP2Q5VTU8 51 aa5.6□□□□□ -1.51
CLCN3-209ENST00000513761 PRUNE2Q8WUY3 3088 aa5.6□□□□□ -1.51
CLCN3-209ENST00000513761 LRRC75A-AS1Q8N1F1 130 aa5.6□□□□□ -1.51
CLCN3-209ENST00000513761 IGHV4-31P0DP07 118 aa5.6□□□□□ -1.51
CLCN3-209ENST00000513761 CDK2AP2O75956 126 aa5.6□□□□□ -1.51
CLCN3-209ENST00000513761 LINC00959A0A1B0GUT2 108 aa5.59□□□□□ -1.51
CLCN3-209ENST00000513761 PDE6GP18545 87 aa5.59□□□□□ -1.51
CLCN3-209ENST00000513761 ABCA12Q86UK0 2595 aa5.59□□□□□ -1.51
CLCN3-209ENST00000513761 PRR3P79522 188 aaKnown RBP5.59□□□□□ -1.51
CLCN3-209ENST00000513761 Q6JHZ5 121 aa5.59□□□□□ -1.51
CLCN3-209ENST00000513761 Q6ZQY7 126 aa5.59□□□□□ -1.51
CLCN3-209ENST00000513761 RPL28P46779 137 aaKnown RBP5.59□□□□□ -1.52
CLCN3-209ENST00000513761 BBC3Q96PG8 261 aaPredicted RBP5.59□□□□□ -1.52
CLCN3-209ENST00000513761 SHISA2Q6UWI4 295 aa5.59□□□□□ -1.52
CLCN3-209ENST00000513761 H3BQ85 93 aa5.58□□□□□ -1.52
CLCN3-209ENST00000513761 BPY2O14599 106 aa5.58□□□□□ -1.52
CLCN3-209ENST00000513761 PPDPFQ9H3Y8 114 aa5.58□□□□□ -1.52
CLCN3-209ENST00000513761 HRCT1Q6UXD1 115 aa5.58□□□□□ -1.52
CLCN3-209ENST00000513761 CHD8Q9HCK8 2581 aa5.58□□□□□ -1.52
CLCN3-209ENST00000513761 NDUFC2O95298 119 aa5.58□□□□□ -1.52
CLCN3-209ENST00000513761 PKIGQ9Y2B9 76 aa5.58□□□□□ -1.52
CLCN3-209ENST00000513761 A0A0U1RQV1 116 aa5.58□□□□□ -1.52
CLCN3-209ENST00000513761 FHL3Q13643 280 aa5.58□□□□□ -1.52
CLCN3-209ENST00000513761 IGLV4-60A0A075B6I1 120 aa5.58□□□□□ -1.52
CLCN3-209ENST00000513761 C9orf66Q5T8R8 295 aa5.58□□□□□ -1.52
CLCN3-209ENST00000513761 FAM19A5Q7Z5A7 132 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-209ENST00000513761 Q9UF83 564 aa5.58□□□□□ -1.52
CLCN3-209ENST00000513761 Q8N2B8 174 aa5.57□□□□□ -1.52
CLCN3-209ENST00000513761 ODF3L2Q3SX64 289 aa5.57□□□□□ -1.52
CLCN3-209ENST00000513761 PKD1L2Q7Z442 2459 aa5.57□□□□□ -1.52
CLCN3-209ENST00000513761 PIEZO1Q92508 2521 aa5.57□□□□□ -1.52
CLCN3-209ENST00000513761 SBSPONQ8IVN8 264 aa5.57□□□□□ -1.52
CLCN3-209ENST00000513761 LINC00482Q8N8I6 264 aa5.57□□□□□ -1.52
CLCN3-209ENST00000513761 CCKP06307 115 aa5.56□□□□□ -1.52
CLCN3-209ENST00000513761 C9orf116Q5BN46 136 aaPredicted RBP5.56□□□□□ -1.52
CLCN3-209ENST00000513761 LINC00846Q9NV44 126 aa5.56□□□□□ -1.52
CLCN3-209ENST00000513761 TRBV7-7A0A0K0K1E9 115 aa5.56□□□□□ -1.52
CLCN3-209ENST00000513761 SMIM9A6NGZ8 99 aa5.56□□□□□ -1.52
CLCN3-209ENST00000513761 C3orf84H3BNL1 204 aa5.56□□□□□ -1.52
CLCN3-209ENST00000513761 LINC00337Q8N6G1 96 aa5.56□□□□□ -1.52
CLCN3-209ENST00000513761 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
CLCN3-209ENST00000513761 FAM19A4Q96LR4 140 aa5.55□□□□□ -1.52
CLCN3-209ENST00000513761 C1orf158Q8N1D5 194 aa5.55□□□□□ -1.52
CLCN3-209ENST00000513761 SPTBN4Q9H254 2564 aa5.55□□□□□ -1.52
CLCN3-209ENST00000513761 CD164L2Q6UWJ8 174 aa5.55□□□□□ -1.52
CLCN3-209ENST00000513761 TRIOO75962 3097 aa5.55□□□□□ -1.52
CLCN3-209ENST00000513761 POLQO75417 2590 aa5.54□□□□□ -1.52
CLCN3-209ENST00000513761 HILS1P60008 231 aa5.54□□□□□ -1.52
CLCN3-209ENST00000513761 FAM19A1Q7Z5A9 133 aa5.54□□□□□ -1.52
CLCN3-209ENST00000513761 MP68P56378 58 aa5.54□□□□□ -1.52
CLCN3-209ENST00000513761 Q8N814 137 aa5.54□□□□□ -1.52
CLCN3-209ENST00000513761 NDUFS5O43920 106 aa5.54□□□□□ -1.52
CLCN3-209ENST00000513761 NDUFC2-KCTD14E9PQ53 114 aa5.53□□□□□ -1.52
CLCN3-209ENST00000513761 NTM-AS1Q6ZSK4 140 aa5.53□□□□□ -1.52
CLCN3-209ENST00000513761 PRORYQ9H606 182 aa5.53□□□□□ -1.52
CLCN3-209ENST00000513761 A0A087WZ39 114 aa5.53□□□□□ -1.52
CLCN3-209ENST00000513761 Q8IZM0 81 aa5.53□□□□□ -1.52
CLCN3-209ENST00000513761 TRANK1O15050 2925 aa5.53□□□□□ -1.52
CLCN3-209ENST00000513761 PLA2G2AP14555 144 aa5.53□□□□□ -1.52
CLCN3-209ENST00000513761 FAM218AQ96MZ4 157 aa5.53□□□□□ -1.52
CLCN3-209ENST00000513761 RMI2Q96E14 147 aa5.53□□□□□ -1.52
CLCN3-209ENST00000513761 VCANP13611 3396 aa5.53□□□□□ -1.52
CLCN3-209ENST00000513761 CSDC2Q9Y534 153 aaKnown RBP5.53□□□□□ -1.52
CLCN3-209ENST00000513761 CELSR3Q9NYQ7 3312 aa5.52□□□□□ -1.52
CLCN3-209ENST00000513761 BRI3O95415 125 aa5.52□□□□□ -1.53
CLCN3-209ENST00000513761 BEAN1Q3B7T3 259 aa5.52□□□□□ -1.53
CLCN3-209ENST00000513761 SOSTDC1Q6X4U4 206 aa5.52□□□□□ -1.53
CLCN3-209ENST00000513761 UNQ6190/PRO20217Q6UXQ8 127 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms