RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 CFC1P0CG37 223 aa11.58□□□□□ -0.56
HMGCL-209ENST00000513148 HERVK_113P61574 105 aa11.58□□□□□ -0.56
HMGCL-209ENST00000513148 CCDC179H3BU77 68 aa11.57□□□□□ -0.56
HMGCL-209ENST00000513148 SLC25A29Q8N8R3 303 aa11.57□□□□□ -0.56
HMGCL-209ENST00000513148 IGHV3-30P01768 117 aa11.57□□□□□ -0.56
HMGCL-209ENST00000513148 IGHV3-30-5P0DP03 117 aa11.57□□□□□ -0.56
HMGCL-209ENST00000513148 KIR2DL4Q99706 377 aa11.57□□□□□ -0.56
HMGCL-209ENST00000513148 PHLDA3Q9Y5J5 127 aa11.57□□□□□ -0.56
HMGCL-209ENST00000513148 TRAV4A0A0B4J268 109 aa11.56□□□□□ -0.56
HMGCL-209ENST00000513148 M0R381 172 aa11.55□□□□□ -0.56
HMGCL-209ENST00000513148 PPP1R17O96001 155 aa11.55□□□□□ -0.56
HMGCL-209ENST00000513148 POM121L12Q8N7R1 296 aa11.55□□□□□ -0.56
HMGCL-209ENST00000513148 BAALCQ8WXS3 180 aa11.55□□□□□ -0.56
HMGCL-209ENST00000513148 PLECQ15149 4684 aaKnown RBP11.54□□□□□ -0.56
HMGCL-209ENST00000513148 DYNC2H1Q8NCM8 4307 aaKnown RBP11.54□□□□□ -0.56
HMGCL-209ENST00000513148 A0A0B4J2C4 111 aa11.54□□□□□ -0.56
HMGCL-209ENST00000513148 FAM240AA0A1B0GVK7 77 aa11.54□□□□□ -0.56
HMGCL-209ENST00000513148 PLEKHB2Q96CS7 222 aa11.54□□□□□ -0.56
HMGCL-209ENST00000513148 NACAE9PAV3 2078 aa11.54□□□□□ -0.56
HMGCL-209ENST00000513148 TRGV4A0A0C4DH28 118 aa11.53□□□□□ -0.56
HMGCL-209ENST00000513148 SPANXCQ9NY87 97 aa11.53□□□□□ -0.56
HMGCL-209ENST00000513148 APLNQ9ULZ1 77 aa11.53□□□□□ -0.56
HMGCL-209ENST00000513148 IGHV3-73A0A0B4J1V6 119 aa11.53□□□□□ -0.56
HMGCL-209ENST00000513148 SUMO2P61956 95 aaKnown RBP11.53□□□□□ -0.56
HMGCL-209ENST00000513148 LYSTQ99698 3801 aa11.53□□□□□ -0.56
HMGCL-209ENST00000513148 JPT2Q9H910 190 aa11.53□□□□□ -0.56
HMGCL-209ENST00000513148 ATXN8Q156A1 80 aa11.52□□□□□ -0.56
HMGCL-209ENST00000513148 TRAV8-4A0A0B4J246 113 aa11.52□□□□□ -0.57
HMGCL-209ENST00000513148 C9JAW5 83 aa11.52□□□□□ -0.57
HMGCL-209ENST00000513148 MED14OSP0DP75 135 aa11.52□□□□□ -0.57
HMGCL-209ENST00000513148 FHL2Q14192 279 aa11.52□□□□□ -0.57
HMGCL-209ENST00000513148 IGHV3-33P01772 117 aa11.51□□□□□ -0.57
HMGCL-209ENST00000513148 SPANXN1Q5VSR9 72 aa11.51□□□□□ -0.57
HMGCL-209ENST00000513148 C2orf66Q6UXQ4 117 aa11.51□□□□□ -0.57
HMGCL-209ENST00000513148 TRBV10-2A0A0K0K1G8 114 aa11.5□□□□□ -0.57
HMGCL-209ENST00000513148 C11orf86A6NJI1 115 aa11.5□□□□□ -0.57
HMGCL-209ENST00000513148 RS1O15537 224 aa11.5□□□□□ -0.57
HMGCL-209ENST00000513148 FAM74A4Q5TZK3 123 aa11.5□□□□□ -0.57
HMGCL-209ENST00000513148 IMUPQ9GZP8 106 aa11.5□□□□□ -0.57
HMGCL-209ENST00000513148 A0A087WWL8 130 aa11.49□□□□□ -0.57
HMGCL-209ENST00000513148 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.49□□□□□ -0.57
HMGCL-209ENST00000513148 TRBV7-7A0A0K0K1E9 115 aa11.49□□□□□ -0.57
HMGCL-209ENST00000513148 MEIG1Q5JSS6 88 aa11.49□□□□□ -0.57
HMGCL-209ENST00000513148 C15orf53Q8NAA6 179 aa11.49□□□□□ -0.57
HMGCL-209ENST00000513148 TMEM141Q96I45 108 aa11.49□□□□□ -0.57
HMGCL-209ENST00000513148 VSIG2Q96IQ7 327 aa11.49□□□□□ -0.57
HMGCL-209ENST00000513148 PRO0255Q9UI72 69 aa11.49□□□□□ -0.57
HMGCL-209ENST00000513148 PAX4O43316 350 aa11.48□□□□□ -0.57
HMGCL-209ENST00000513148 LINC01620Q4KN68 170 aa11.48□□□□□ -0.57
HMGCL-209ENST00000513148 PIK3CD-AS1Q5SR53 167 aa11.48□□□□□ -0.57
HMGCL-209ENST00000513148 KMT2CQ8NEZ4 4911 aaKnown RBP11.48□□□□□ -0.57
HMGCL-209ENST00000513148 TRBV30A0A0K0K1B3 111 aa11.48□□□□□ -0.57
HMGCL-209ENST00000513148 LY6G6CO95867 125 aa11.48□□□□□ -0.57
HMGCL-209ENST00000513148 SFTA2Q6UW10 78 aa11.48□□□□□ -0.57
HMGCL-209ENST00000513148 NTN5Q8WTR8 489 aaPredicted RBP11.48□□□□□ -0.57
HMGCL-209ENST00000513148 TRAV26-2A0A0B4J265 109 aa11.47□□□□□ -0.57
HMGCL-209ENST00000513148 NXPH4O95158 308 aa11.47□□□□□ -0.57
HMGCL-209ENST00000513148 CRYGDP07320 174 aa11.47□□□□□ -0.57
HMGCL-209ENST00000513148 IGLV4-69A0A075B6H9 119 aa11.47□□□□□ -0.57
HMGCL-209ENST00000513148 LINC00476Q8WZB0 136 aa11.47□□□□□ -0.57
HMGCL-209ENST00000513148 H3BT86 120 aa11.46□□□□□ -0.57
HMGCL-209ENST00000513148 PMVKQ15126 192 aa11.46□□□□□ -0.57
HMGCL-209ENST00000513148 AMELXQ99217 191 aa11.46□□□□□ -0.57
HMGCL-209ENST00000513148 DPH3P1Q9H4G8 78 aa11.46□□□□□ -0.57
HMGCL-209ENST00000513148 TIMM17AQ99595 171 aa11.45□□□□□ -0.58
HMGCL-209ENST00000513148 LOC100131303A0A0U1RQF7 123 aa11.45□□□□□ -0.58
HMGCL-209ENST00000513148 LCE6AA0A183 80 aa11.45□□□□□ -0.58
HMGCL-209ENST00000513148 C14orf178Q8N769 122 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-209ENST00000513148 UBE2WQ96B02 151 aa11.45□□□□□ -0.58
HMGCL-209ENST00000513148 A0A096LPF7 62 aa11.44□□□□□ -0.58
HMGCL-209ENST00000513148 IGIPA6NJ69 53 aa11.44□□□□□ -0.58
HMGCL-209ENST00000513148 H3BNG1 76 aa11.44□□□□□ -0.58
HMGCL-209ENST00000513148 GYPEP15421 78 aa11.44□□□□□ -0.58
HMGCL-209ENST00000513148 Q6ZSN1 163 aa11.44□□□□□ -0.58
HMGCL-209ENST00000513148 DNAJC30Q96LL9 226 aa11.44□□□□□ -0.58
HMGCL-209ENST00000513148 ICOSQ9Y6W8 199 aa11.43□□□□□ -0.58
HMGCL-209ENST00000513148 A4D1N5 150 aa11.43□□□□□ -0.58
HMGCL-209ENST00000513148 J3QQQ9 107 aa11.42□□□□□ -0.58
HMGCL-209ENST00000513148 K7EQD1 137 aa11.42□□□□□ -0.58
HMGCL-209ENST00000513148 ACYP1P07311 99 aa11.42□□□□□ -0.58
HMGCL-209ENST00000513148 ZNF56Q15929 161 aa11.42□□□□□ -0.58
HMGCL-209ENST00000513148 UBE2DNLQ8IWF7 75 aa11.42□□□□□ -0.58
HMGCL-209ENST00000513148 TRBV6-4A0A1B0GX49 114 aa11.42□□□□□ -0.58
HMGCL-209ENST00000513148 RHOHQ15669 191 aa11.42□□□□□ -0.58
HMGCL-209ENST00000513148 TMEM170BQ5T4T1 132 aa11.42□□□□□ -0.58
HMGCL-209ENST00000513148 SDHAF1A6NFY7 115 aa11.41□□□□□ -0.58
HMGCL-209ENST00000513148 LGALS3P17931 250 aaKnown RBP11.41□□□□□ -0.58
HMGCL-209ENST00000513148 ALMS1Q8TCU4 4167 aa11.4□□□□□ -0.58
HMGCL-209ENST00000513148 LEPROTO15243 131 aa11.4□□□□□ -0.58
HMGCL-209ENST00000513148 MGPP08493 103 aa11.4□□□□□ -0.58
HMGCL-209ENST00000513148 TEX49A0A1B0GTD5 131 aa11.4□□□□□ -0.59
HMGCL-209ENST00000513148 F5H697 171 aa11.4□□□□□ -0.59
HMGCL-209ENST00000513148 TSHBP01222 138 aa11.4□□□□□ -0.59
HMGCL-209ENST00000513148 TMEM101Q96IK0 257 aa11.4□□□□□ -0.59
HMGCL-209ENST00000513148 Q9UF83 564 aa11.4□□□□□ -0.59
HMGCL-209ENST00000513148 C5orf47Q569G3 176 aa11.39□□□□□ -0.59
HMGCL-209ENST00000513148 EIF4EBP3O60516 100 aaPredicted RBP11.38□□□□□ -0.59
HMGCL-209ENST00000513148 KIF25-AS1Q9Y6Z4 181 aa11.38□□□□□ -0.59
HMGCL-209ENST00000513148 A0A1B0GX51 115 aa11.38□□□□□ -0.59
HMGCL-209ENST00000513148 CCL18P55774 89 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms