RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 ANKRD36BQ8N2N9 1353 aa1.27□□□□□ -2.21
RFC1-214ENST00000512726 ATOX1O00244 68 aa1.27□□□□□ -2.21
RFC1-214ENST00000512726 SPCS1Q9Y6A9 102 aa1.27□□□□□ -2.21
RFC1-214ENST00000512726 TPRP12270 2363 aaKnown RBP1.27□□□□□ -2.21
RFC1-214ENST00000512726 BCE1O60756 84 aa1.26□□□□□ -2.21
RFC1-214ENST00000512726 KRTAP2-3P0C7H8 128 aa1.26□□□□□ -2.21
RFC1-214ENST00000512726 KRTAP2-4Q9BYR9 128 aa1.26□□□□□ -2.21
RFC1-214ENST00000512726 KRTAP2-1Q9BYU5 128 aa1.26□□□□□ -2.21
RFC1-214ENST00000512726 COL4A6Q14031 1691 aa1.26□□□□□ -2.21
RFC1-214ENST00000512726 ADGRL2O95490 1459 aa1.25□□□□□ -2.21
RFC1-214ENST00000512726 MLH3Q9UHC1 1453 aa1.25□□□□□ -2.21
RFC1-214ENST00000512726 C10orf142B7Z368 130 aa1.25□□□□□ -2.21
RFC1-214ENST00000512726 CACFD1Q9UGQ2 172 aa1.25□□□□□ -2.21
RFC1-214ENST00000512726 PRO0255Q9UI72 69 aa1.25□□□□□ -2.21
RFC1-214ENST00000512726 ANKRD26Q9UPS8 1709 aa1.25□□□□□ -2.21
RFC1-214ENST00000512726 A0A0G2JND7 137 aa1.24□□□□□ -2.21
RFC1-214ENST00000512726 PLCE1Q9P212 2302 aa1.23□□□□□ -2.21
RFC1-214ENST00000512726 NSD3Q9BZ95 1437 aa1.23□□□□□ -2.21
RFC1-214ENST00000512726 PIEZO1Q92508 2521 aa1.22□□□□□ -2.21
RFC1-214ENST00000512726 VAMP8Q9BV40 100 aa1.22□□□□□ -2.21
RFC1-214ENST00000512726 SNHG12Q9BXW3 62 aa1.22□□□□□ -2.21
RFC1-214ENST00000512726 NUP188Q5SRE5 1749 aa1.22□□□□□ -2.21
RFC1-214ENST00000512726 LAMC1P11047 1609 aa1.22□□□□□ -2.21
RFC1-214ENST00000512726 MAGI1Q96QZ7 1491 aaPredicted RBP1.21□□□□□ -2.22
RFC1-214ENST00000512726 C10orf113Q5VZT2 155 aa1.21□□□□□ -2.22
RFC1-214ENST00000512726 SERP2Q8N6R1 65 aa1.21□□□□□ -2.22
RFC1-214ENST00000512726 PRO1933Q9H354 126 aa1.21□□□□□ -2.22
RFC1-214ENST00000512726 SPTBN2O15020 2390 aa1.21□□□□□ -2.22
RFC1-214ENST00000512726 TRGV9Q99603 122 aa1.2□□□□□ -2.22
RFC1-214ENST00000512726 USP24Q9UPU5 2620 aa1.19□□□□□ -2.22
RFC1-214ENST00000512726 PMCHL1Q16048 86 aa1.19□□□□□ -2.22
RFC1-214ENST00000512726 ZFHX3Q15911 3703 aa1.19□□□□□ -2.22
RFC1-214ENST00000512726 ARHGEF12Q9NZN5 1544 aa1.19□□□□□ -2.22
RFC1-214ENST00000512726 GOLGA4Q13439 2230 aaKnown RBP1.19□□□□□ -2.22
RFC1-214ENST00000512726 TRBV25-1A0A075B6N4 114 aa1.18□□□□□ -2.22
RFC1-214ENST00000512726 TP53AIP1Q9HCN2 124 aa1.18□□□□□ -2.22
RFC1-214ENST00000512726 C2CD3Q4AC94 2353 aa1.17□□□□□ -2.22
RFC1-214ENST00000512726 TRBV6-1A0A0K0K1D8 114 aa1.17□□□□□ -2.22
RFC1-214ENST00000512726 H7BZZ5 65 aa1.17□□□□□ -2.22
RFC1-214ENST00000512726 LINC00846Q9NV44 126 aa1.17□□□□□ -2.22
RFC1-214ENST00000512726 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
RFC1-214ENST00000512726 UQCRHP07919 91 aa1.16□□□□□ -2.22
RFC1-214ENST00000512726 PSMG4Q5JS54 123 aa1.16□□□□□ -2.22
RFC1-214ENST00000512726 FDCSPQ8NFU4 85 aa1.16□□□□□ -2.22
RFC1-214ENST00000512726 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
RFC1-214ENST00000512726 TENM3Q9P273 2699 aa1.15□□□□□ -2.23
RFC1-214ENST00000512726 CELSR2Q9HCU4 2923 aa1.14□□□□□ -2.23
RFC1-214ENST00000512726 FAUP35544 74 aaKnown RBP1.14□□□□□ -2.23
RFC1-214ENST00000512726 LINC01600Q96MT4 127 aa1.14□□□□□ -2.23
RFC1-214ENST00000512726 NAV2Q8IVL1 2488 aa1.14□□□□□ -2.23
RFC1-214ENST00000512726 BIVM-ERCC5R4GMW8 1640 aa1.14□□□□□ -2.23
RFC1-214ENST00000512726 PTPRZ1P23471 2315 aaPredicted RBP1.12□□□□□ -2.23
RFC1-214ENST00000512726 POLA1P09884 1462 aaPredicted RBP1.12□□□□□ -2.23
RFC1-214ENST00000512726 C1orf167Q5SNV9 1468 aa1.12□□□□□ -2.23
RFC1-214ENST00000512726 TRBV7-7A0A0K0K1E9 115 aa1.12□□□□□ -2.23
RFC1-214ENST00000512726 C7orf77A4D0Y5 90 aa1.12□□□□□ -2.23
RFC1-214ENST00000512726 SYS1-DBNDD2H3BUS1 97 aa1.12□□□□□ -2.23
RFC1-214ENST00000512726 ASIPP42127 132 aa1.12□□□□□ -2.23
RFC1-214ENST00000512726 Q5BKY6 102 aa1.12□□□□□ -2.23
RFC1-214ENST00000512726 Q8IZM0 81 aa1.12□□□□□ -2.23
RFC1-214ENST00000512726 TROQ12816 1431 aaPredicted RBP1.12□□□□□ -2.23
RFC1-214ENST00000512726 I3L2K1 104 aa1.11□□□□□ -2.23
RFC1-214ENST00000512726 MARF1Q9Y4F3 1742 aaKnown RBP1.1□□□□□ -2.23
RFC1-214ENST00000512726 UQCRHLA0A096LP55 91 aa1.1□□□□□ -2.23
RFC1-214ENST00000512726 PIGYQ3MUY2 71 aa1.1□□□□□ -2.23
RFC1-214ENST00000512726 RAPGEF2Q9Y4G8 1499 aa1.1□□□□□ -2.23
RFC1-214ENST00000512726 IGF2RP11717 2491 aa1.1□□□□□ -2.23
RFC1-214ENST00000512726 PAPPAQ13219 1627 aa1.09□□□□□ -2.23
RFC1-214ENST00000512726 A0A087WVE0 104 aa1.09□□□□□ -2.23
RFC1-214ENST00000512726 PLEKHH2Q8IVE3 1493 aa1.09□□□□□ -2.24
RFC1-214ENST00000512726 CLTCQ00610 1675 aaKnown RBP1.09□□□□□ -2.24
RFC1-214ENST00000512726 CHD9Q3L8U1 2897 aa1.07□□□□□ -2.24
RFC1-214ENST00000512726 DNAJC13O75165 2243 aa1.07□□□□□ -2.24
RFC1-214ENST00000512726 ZFYVE26Q68DK2 2539 aa1.07□□□□□ -2.24
RFC1-214ENST00000512726 SPINK1P00995 79 aa1.07□□□□□ -2.24
RFC1-214ENST00000512726 LCN9Q8WX39 176 aa1.07□□□□□ -2.24
RFC1-214ENST00000512726 Q9H521 79 aa1.07□□□□□ -2.24
RFC1-214ENST00000512726 TTC37Q6PGP7 1564 aa1.07□□□□□ -2.24
RFC1-214ENST00000512726 DOPEY2Q9Y3R5 2298 aa1.06□□□□□ -2.24
RFC1-214ENST00000512726 XRN1Q8IZH2 1706 aaKnown RBP1.06□□□□□ -2.24
RFC1-214ENST00000512726 ZNF292O60281 2723 aa1.06□□□□□ -2.24
RFC1-214ENST00000512726 ABCC2Q92887 1545 aa1.06□□□□□ -2.24
RFC1-214ENST00000512726 BAZ1AQ9NRL2 1556 aaPredicted RBP1.05□□□□□ -2.24
RFC1-214ENST00000512726 H3BQF6 201 aa1.05□□□□□ -2.24
RFC1-214ENST00000512726 ANK2Q01484 3957 aa1.05□□□□□ -2.24
RFC1-214ENST00000512726 SMARCA2P51531 1590 aa1.04□□□□□ -2.24
RFC1-214ENST00000512726 USF3Q68DE3 2245 aa1.04□□□□□ -2.24
RFC1-214ENST00000512726 TRBV7-4A0A0J9YYF1 115 aa1.04□□□□□ -2.24
RFC1-214ENST00000512726 GYPAP02724 150 aa1.04□□□□□ -2.24
RFC1-214ENST00000512726 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
RFC1-214ENST00000512726 FXYD6-FXYD2A0A087WZ82 144 aa1.03□□□□□ -2.24
RFC1-214ENST00000512726 NLRP1Q9C000 1473 aa1.03□□□□□ -2.24
RFC1-214ENST00000512726 NRXN1Q9ULB1 1477 aa1.03□□□□□ -2.24
RFC1-214ENST00000512726 NHSL1Q5SYE7 1610 aa1.03□□□□□ -2.24
RFC1-214ENST00000512726 A0A0G2JMZ2 1700 aa1.01□□□□□ -2.25
RFC1-214ENST00000512726 TULP4Q9NRJ4 1543 aa1.01□□□□□ -2.25
RFC1-214ENST00000512726 ZNF720Q7Z2F6 126 aa1.01□□□□□ -2.25
RFC1-214ENST00000512726 V9GYS6 101 aa1.01□□□□□ -2.25
RFC1-214ENST00000512726 ANKRD17O75179 2603 aaKnown RBP1.01□□□□□ -2.25
RFC1-214ENST00000512726 KNDC1Q76NI1 1749 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms