RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 MED13Q9UHV7 2174 aa3.2□□□□□ -1.9
HMGB3P13-201ENST00000511263 IGLV4-69A0A075B6H9 119 aa3.2□□□□□ -1.9
HMGB3P13-201ENST00000511263 IGLV3-9A0A075B6K5 115 aa3.2□□□□□ -1.9
HMGB3P13-201ENST00000511263 TRAV22A0A0B4J277 110 aa3.2□□□□□ -1.9
HMGB3P13-201ENST00000511263 LINC00313P59037 77 aa3.2□□□□□ -1.9
HMGB3P13-201ENST00000511263 ZNF833PQ6ZTB9 187 aa3.2□□□□□ -1.9
HMGB3P13-201ENST00000511263 ZNRF1Q8ND25 227 aa3.2□□□□□ -1.9
HMGB3P13-201ENST00000511263 KLF14Q8TD94 323 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P13-201ENST00000511263 Q9HAA7 133 aa3.2□□□□□ -1.9
HMGB3P13-201ENST00000511263 MRPL36Q9P0J6 103 aaKnown RBP3.2□□□□□ -1.9
HMGB3P13-201ENST00000511263 NDUFA12Q9UI09 145 aa3.2□□□□□ -1.9
HMGB3P13-201ENST00000511263 SNURFQ9Y675 71 aa3.2□□□□□ -1.9
HMGB3P13-201ENST00000511263 DOCK10Q96BY6 2186 aa3.19□□□□□ -1.9
HMGB3P13-201ENST00000511263 LAMA1P25391 3075 aa3.19□□□□□ -1.9
HMGB3P13-201ENST00000511263 WDFY4Q6ZS81 3184 aa3.19□□□□□ -1.9
HMGB3P13-201ENST00000511263 TRAV12-3A0A0B4J271 114 aa3.19□□□□□ -1.9
HMGB3P13-201ENST00000511263 IGHV1-18A0A0C4DH31 117 aa3.19□□□□□ -1.9
HMGB3P13-201ENST00000511263 A0A1B0GW54 56 aa3.19□□□□□ -1.9
HMGB3P13-201ENST00000511263 NREPQ16612 68 aa3.19□□□□□ -1.9
HMGB3P13-201ENST00000511263 FAM229BQ4G0N7 80 aa3.19□□□□□ -1.9
HMGB3P13-201ENST00000511263 ENHOQ6UWT2 76 aa3.19□□□□□ -1.9
HMGB3P13-201ENST00000511263 SCXQ7RTU7 201 aa3.19□□□□□ -1.9
HMGB3P13-201ENST00000511263 C14orf178Q8N769 122 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P13-201ENST00000511263 SPTSSBQ8NFR3 76 aa3.19□□□□□ -1.9
HMGB3P13-201ENST00000511263 LINC01560Q8TB33 94 aa3.19□□□□□ -1.9
HMGB3P13-201ENST00000511263 ITLN2Q8WWU7 325 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P13-201ENST00000511263 CDC42SE1Q9NRR8 79 aa3.19□□□□□ -1.9
HMGB3P13-201ENST00000511263 APC2O95996 2303 aa3.18□□□□□ -1.9
HMGB3P13-201ENST00000511263 HCG22E2RYF7 251 aa3.18□□□□□ -1.9
HMGB3P13-201ENST00000511263 H3BQ85 93 aa3.18□□□□□ -1.9
HMGB3P13-201ENST00000511263 CHKB-CPT1BH3BT56 60 aa3.18□□□□□ -1.9
HMGB3P13-201ENST00000511263 GNRH2O43555 120 aa3.18□□□□□ -1.9
HMGB3P13-201ENST00000511263 NDUFB1O75438 58 aa3.18□□□□□ -1.9
HMGB3P13-201ENST00000511263 LHBP01229 141 aa3.18□□□□□ -1.9
HMGB3P13-201ENST00000511263 TRGV3P03979 118 aa3.18□□□□□ -1.9
HMGB3P13-201ENST00000511263 PDE6GP18545 87 aa3.18□□□□□ -1.9
HMGB3P13-201ENST00000511263 TSPEAR-AS2P59090 65 aa3.18□□□□□ -1.9
HMGB3P13-201ENST00000511263 C6orf99Q4VX62 202 aa3.18□□□□□ -1.9
HMGB3P13-201ENST00000511263 C14orf132Q9NPU4 83 aa3.18□□□□□ -1.9
HMGB3P13-201ENST00000511263 WDR87Q6ZQQ6 2873 aa3.18□□□□□ -1.9
HMGB3P13-201ENST00000511263 WDFY3Q8IZQ1 3526 aa3.17□□□□□ -1.9
HMGB3P13-201ENST00000511263 ALPK2Q86TB3 2170 aa3.17□□□□□ -1.9
HMGB3P13-201ENST00000511263 CACNA1AO00555 2505 aa3.17□□□□□ -1.9
HMGB3P13-201ENST00000511263 IGKV1OR2-108A0A075B7D4 117 aa3.17□□□□□ -1.9
HMGB3P13-201ENST00000511263 TRBV6-8A0A0A6YYG3 113 aa3.17□□□□□ -1.9
HMGB3P13-201ENST00000511263 IGHV3-16A0A0C4DH30 117 aa3.17□□□□□ -1.9
HMGB3P13-201ENST00000511263 A8MU10 97 aa3.17□□□□□ -1.9
HMGB3P13-201ENST00000511263 C16orf90A8MZG2 172 aa3.17□□□□□ -1.9
HMGB3P13-201ENST00000511263 J3QKU1 62 aa3.17□□□□□ -1.9
HMGB3P13-201ENST00000511263 PATE2Q6UY27 113 aa3.17□□□□□ -1.9
HMGB3P13-201ENST00000511263 CASC2Q6XLA1 102 aa3.17□□□□□ -1.9
HMGB3P13-201ENST00000511263 C11orf72Q8NBR9 251 aa3.17□□□□□ -1.9
HMGB3P13-201ENST00000511263 ORMDL1Q9P0S3 153 aa3.17□□□□□ -1.9
HMGB3P13-201ENST00000511263 VPS13AQ96RL7 3174 aa3.16□□□□□ -1.9
HMGB3P13-201ENST00000511263 TRAV21A0A0B4J279 112 aa3.16□□□□□ -1.9
HMGB3P13-201ENST00000511263 A0A0J9YXV3 536 aa3.16□□□□□ -1.9
HMGB3P13-201ENST00000511263 C3orf84H3BNL1 204 aa3.16□□□□□ -1.9
HMGB3P13-201ENST00000511263 K7EQG2 157 aa3.16□□□□□ -1.9
HMGB3P13-201ENST00000511263 ELOF1P60002 83 aaKnown RBP3.16□□□□□ -1.9
HMGB3P13-201ENST00000511263 BSPH1Q075Z2 132 aa3.16□□□□□ -1.9
HMGB3P13-201ENST00000511263 C9orf116Q5BN46 136 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P13-201ENST00000511263 Q5VV11 94 aa3.16□□□□□ -1.9
HMGB3P13-201ENST00000511263 REG3GQ6UW15 175 aa3.16□□□□□ -1.9
HMGB3P13-201ENST00000511263 LINC00337Q8N6G1 96 aa3.16□□□□□ -1.9
HMGB3P13-201ENST00000511263 KAAG1Q9UBP8 84 aa3.16□□□□□ -1.9
HMGB3P13-201ENST00000511263 PTPRQQ9UMZ3 2332 aa3.16□□□□□ -1.9
HMGB3P13-201ENST00000511263 NACAE9PAV3 2078 aa3.16□□□□□ -1.9
HMGB3P13-201ENST00000511263 FRYLO94915 3013 aa3.15□□□□□ -1.9
HMGB3P13-201ENST00000511263 IGHV6-1A0A0B4J1U7 121 aa3.15□□□□□ -1.91
HMGB3P13-201ENST00000511263 DEFB108AA8MXU0 73 aa3.15□□□□□ -1.91
HMGB3P13-201ENST00000511263 C12orf77C9JDV5 145 aa3.15□□□□□ -1.91
HMGB3P13-201ENST00000511263 CRPP02741 224 aa3.15□□□□□ -1.91
HMGB3P13-201ENST00000511263 SAA2P0DJI9 122 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P13-201ENST00000511263 CRIP1P50238 77 aa3.15□□□□□ -1.91
HMGB3P13-201ENST00000511263 PRR3P79522 188 aaKnown RBP3.15□□□□□ -1.91
HMGB3P13-201ENST00000511263 FAM74A4Q5TZK3 123 aa3.15□□□□□ -1.91
HMGB3P13-201ENST00000511263 KIF25-AS1Q9Y6Z4 181 aa3.15□□□□□ -1.91
HMGB3P13-201ENST00000511263 TPRP12270 2363 aaKnown RBP3.14□□□□□ -1.91
HMGB3P13-201ENST00000511263 SVILO95425 2214 aa3.14□□□□□ -1.91
HMGB3P13-201ENST00000511263 A6NED7 52 aa3.14□□□□□ -1.91
HMGB3P13-201ENST00000511263 RPL37AP8A6NKH3 93 aa3.14□□□□□ -1.91
HMGB3P13-201ENST00000511263 SRRM5B3KS81 715 aa3.14□□□□□ -1.91
HMGB3P13-201ENST00000511263 PSCAO43653 123 aa3.14□□□□□ -1.91
HMGB3P13-201ENST00000511263 IGKV1-16P04430 117 aa3.14□□□□□ -1.91
HMGB3P13-201ENST00000511263 IGHV3-30-3P0DP02 117 aa3.14□□□□□ -1.91
HMGB3P13-201ENST00000511263 RPL27AP46776 148 aaKnown RBP3.14□□□□□ -1.91
HMGB3P13-201ENST00000511263 LINC00242Q5T6M2 205 aa3.14□□□□□ -1.91
HMGB3P13-201ENST00000511263 TYMSOSQ8TAI1 123 aa3.14□□□□□ -1.91
HMGB3P13-201ENST00000511263 LINC00574Q9H8X3 128 aa3.14□□□□□ -1.91
HMGB3P13-201ENST00000511263 C22orf24Q9Y442 160 aa3.14□□□□□ -1.91
HMGB3P13-201ENST00000511263 SPTBN4Q9H254 2564 aa3.14□□□□□ -1.91
HMGB3P13-201ENST00000511263 CACNA1BQ00975 2339 aa3.14□□□□□ -1.91
HMGB3P13-201ENST00000511263 DNAJC13O75165 2243 aa3.13□□□□□ -1.91
HMGB3P13-201ENST00000511263 MAP1BP46821 2468 aaKnown RBP3.13□□□□□ -1.91
HMGB3P13-201ENST00000511263 LOC101927531A0A1B0GV80 90 aa3.13□□□□□ -1.91
HMGB3P13-201ENST00000511263 BPY2O14599 106 aa3.13□□□□□ -1.91
HMGB3P13-201ENST00000511263 NDUFA1O15239 70 aa3.13□□□□□ -1.91
HMGB3P13-201ENST00000511263 IGHV1-46P01743 117 aa3.13□□□□□ -1.91
HMGB3P13-201ENST00000511263 C1orf64Q8NEQ6 169 aa3.13□□□□□ -1.91
HMGB3P13-201ENST00000511263 ZNF706Q9Y5V0 76 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms