RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 GEMIN7Q9H840 131 aaKnown RBP3.35□□□□□ -1.87
PDLIM5-214ENST00000510099 CDC42SE2Q9NRR3 84 aa3.35□□□□□ -1.87
PDLIM5-214ENST00000510099 NDUFA12Q9UI09 145 aa3.35□□□□□ -1.87
PDLIM5-214ENST00000510099 SPCS1Q9Y6A9 102 aa3.35□□□□□ -1.87
PDLIM5-214ENST00000510099 TRBV6-8A0A0A6YYG3 113 aa3.34□□□□□ -1.87
PDLIM5-214ENST00000510099 IGHV4-28A0A0C4DH34 117 aa3.34□□□□□ -1.87
PDLIM5-214ENST00000510099 SMIM1B2RUZ4 78 aa3.34□□□□□ -1.87
PDLIM5-214ENST00000510099 F5H768 121 aa3.34□□□□□ -1.87
PDLIM5-214ENST00000510099 UBE2L6O14933 153 aa3.34□□□□□ -1.87
PDLIM5-214ENST00000510099 NDUFA1O15239 70 aa3.34□□□□□ -1.87
PDLIM5-214ENST00000510099 TIMM17BO60830 172 aa3.34□□□□□ -1.87
PDLIM5-214ENST00000510099 DEFB130BP0DP73 79 aa3.34□□□□□ -1.87
PDLIM5-214ENST00000510099 DEFB130AP0DP74 79 aa3.34□□□□□ -1.87
PDLIM5-214ENST00000510099 DEFB135Q30KP9 77 aa3.34□□□□□ -1.87
PDLIM5-214ENST00000510099 Q8NAQ8 132 aa3.34□□□□□ -1.87
PDLIM5-214ENST00000510099 TMEM101Q96IK0 257 aa3.34□□□□□ -1.87
PDLIM5-214ENST00000510099 SPANXDQ9BXN6 97 aa3.34□□□□□ -1.87
PDLIM5-214ENST00000510099 SPANXCQ9NY87 97 aa3.34□□□□□ -1.87
PDLIM5-214ENST00000510099 CDKN2A-AS1Q9UH64 79 aa3.34□□□□□ -1.87
PDLIM5-214ENST00000510099 TRRAPQ9Y4A5 3859 aa3.34□□□□□ -1.87
PDLIM5-214ENST00000510099 FLNBO75369 2602 aaKnown RBP3.34□□□□□ -1.88
PDLIM5-214ENST00000510099 ATRQ13535 2644 aa3.34□□□□□ -1.88
PDLIM5-214ENST00000510099 VWFP04275 2813 aa3.33□□□□□ -1.88
PDLIM5-214ENST00000510099 TRAV13-1A0A0B4J241 112 aa3.33□□□□□ -1.88
PDLIM5-214ENST00000510099 A0A0B4J2C4 111 aa3.33□□□□□ -1.88
PDLIM5-214ENST00000510099 EIF4EBP3O60516 100 aaPredicted RBP3.33□□□□□ -1.88
PDLIM5-214ENST00000510099 TSPAN13O95857 204 aa3.33□□□□□ -1.88
PDLIM5-214ENST00000510099 IGHV4-30-4P0DP06 118 aa3.33□□□□□ -1.88
PDLIM5-214ENST00000510099 MIFP14174 115 aa3.33□□□□□ -1.88
PDLIM5-214ENST00000510099 GYPEP15421 78 aa3.33□□□□□ -1.88
PDLIM5-214ENST00000510099 COX6A2Q02221 97 aa3.33□□□□□ -1.88
PDLIM5-214ENST00000510099 GAGE6Q13070 117 aa3.33□□□□□ -1.88
PDLIM5-214ENST00000510099 MIAQ16674 131 aa3.33□□□□□ -1.88
PDLIM5-214ENST00000510099 KRTAP24-1Q3LI83 254 aa3.33□□□□□ -1.88
PDLIM5-214ENST00000510099 FAM222AQ5U5X8 452 aa3.33□□□□□ -1.88
PDLIM5-214ENST00000510099 PRO0255Q9UI72 69 aa3.33□□□□□ -1.88
PDLIM5-214ENST00000510099 ANK2Q01484 3957 aa3.33□□□□□ -1.88
PDLIM5-214ENST00000510099 TENM1Q9UKZ4 2725 aa3.32□□□□□ -1.88
PDLIM5-214ENST00000510099 TRAV26-1A0A087WT03 109 aa3.32□□□□□ -1.88
PDLIM5-214ENST00000510099 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.32□□□□□ -1.88
PDLIM5-214ENST00000510099 A4D1N5 150 aa3.32□□□□□ -1.88
PDLIM5-214ENST00000510099 A8MZ25 164 aa3.32□□□□□ -1.88
PDLIM5-214ENST00000510099 CFC1BP0CG36 223 aa3.32□□□□□ -1.88
PDLIM5-214ENST00000510099 CFC1P0CG37 223 aa3.32□□□□□ -1.88
PDLIM5-214ENST00000510099 RPL24P83731 157 aaKnown RBP3.32□□□□□ -1.88
PDLIM5-214ENST00000510099 ATP6V0E2Q8NHE4 81 aa3.32□□□□□ -1.88
PDLIM5-214ENST00000510099 RNF183Q96D59 192 aa3.32□□□□□ -1.88
PDLIM5-214ENST00000510099 ZNF625Q96I27 306 aaPredicted RBP3.32□□□□□ -1.88
PDLIM5-214ENST00000510099 CHCHD5Q9BSY4 110 aa3.32□□□□□ -1.88
PDLIM5-214ENST00000510099 CELA1Q9UNI1 258 aa3.32□□□□□ -1.88
PDLIM5-214ENST00000510099 IGLV4-60A0A075B6I1 120 aa3.31□□□□□ -1.88
PDLIM5-214ENST00000510099 TEX48A0A1B0GUV7 120 aa3.31□□□□□ -1.88
PDLIM5-214ENST00000510099 APOMO95445 188 aa3.31□□□□□ -1.88
PDLIM5-214ENST00000510099 IFITM1P13164 125 aa3.31□□□□□ -1.88
PDLIM5-214ENST00000510099 DAD1P61803 113 aa3.31□□□□□ -1.88
PDLIM5-214ENST00000510099 EGFEM1PQ0D2K5 195 aa3.31□□□□□ -1.88
PDLIM5-214ENST00000510099 OCIAD2Q56VL3 154 aa3.31□□□□□ -1.88
PDLIM5-214ENST00000510099 ADAMTSL4-AS1Q5T5F5 129 aa3.31□□□□□ -1.88
PDLIM5-214ENST00000510099 LYRM7Q5U5X0 104 aa3.31□□□□□ -1.88
PDLIM5-214ENST00000510099 MUSTN1Q8IVN3 82 aa3.31□□□□□ -1.88
PDLIM5-214ENST00000510099 PPDPFQ9H3Y8 114 aa3.31□□□□□ -1.88
PDLIM5-214ENST00000510099 Q9H8V8 135 aa3.31□□□□□ -1.88
PDLIM5-214ENST00000510099 PRO1854Q9UHT4 67 aa3.31□□□□□ -1.88
PDLIM5-214ENST00000510099 PRO0461Q9UI25 63 aa3.31□□□□□ -1.88
PDLIM5-214ENST00000510099 TEP1Q99973 2627 aaKnown RBP3.31□□□□□ -1.88
PDLIM5-214ENST00000510099 A0A087WZ39 114 aa3.3□□□□□ -1.88
PDLIM5-214ENST00000510099 IGHV3OR16-9A0A0B4J2B5 98 aa3.3□□□□□ -1.88
PDLIM5-214ENST00000510099 A0A1B0GUV1 79 aa3.3□□□□□ -1.88
PDLIM5-214ENST00000510099 DEFB4AO15263 64 aa3.3□□□□□ -1.88
PDLIM5-214ENST00000510099 IGHV3-33P01772 117 aa3.3□□□□□ -1.88
PDLIM5-214ENST00000510099 ATP5G1P05496 136 aa3.3□□□□□ -1.88
PDLIM5-214ENST00000510099 SPART-AS1P0CW21 52 aa3.3□□□□□ -1.88
PDLIM5-214ENST00000510099 KRTAP10-11P60412 298 aa3.3□□□□□ -1.88
PDLIM5-214ENST00000510099 RBX1P62877 108 aa3.3□□□□□ -1.88
PDLIM5-214ENST00000510099 HERV-K104P63124 156 aa3.3□□□□□ -1.88
PDLIM5-214ENST00000510099 LINC00959A0A1B0GUT2 108 aa3.29□□□□□ -1.88
PDLIM5-214ENST00000510099 F8W1H4 67 aa3.29□□□□□ -1.88
PDLIM5-214ENST00000510099 H3BMG7 143 aa3.29□□□□□ -1.88
PDLIM5-214ENST00000510099 SH2D6Q7Z4S9 175 aa3.29□□□□□ -1.88
PDLIM5-214ENST00000510099 PRIMA1Q86XR5 153 aa3.29□□□□□ -1.88
PDLIM5-214ENST00000510099 LINC01561Q8N1V8 128 aa3.29□□□□□ -1.88
PDLIM5-214ENST00000510099 LINC00308Q8TCZ7 52 aa3.29□□□□□ -1.88
PDLIM5-214ENST00000510099 COX7B2Q8TF08 81 aa3.29□□□□□ -1.88
PDLIM5-214ENST00000510099 C11orf68Q9H3H3 251 aaKnown RBP3.29□□□□□ -1.88
PDLIM5-214ENST00000510099 TRBV20-1A0A075B6N2 111 aa3.28□□□□□ -1.88
PDLIM5-214ENST00000510099 A0A096LPF7 62 aa3.28□□□□□ -1.88
PDLIM5-214ENST00000510099 IGKV3OR2-268A0A0C4DH90 116 aa3.28□□□□□ -1.88
PDLIM5-214ENST00000510099 LOC107984156A0A0G2JMH3 177 aa3.28□□□□□ -1.88
PDLIM5-214ENST00000510099 K7ERU9 68 aa3.28□□□□□ -1.88
PDLIM5-214ENST00000510099 TCL1BO95988 128 aa3.28□□□□□ -1.88
PDLIM5-214ENST00000510099 CIRBPQ14011 172 aaKnown RBP3.28□□□□□ -1.88
PDLIM5-214ENST00000510099 MRPL23Q16540 153 aaKnown RBP3.28□□□□□ -1.88
PDLIM5-214ENST00000510099 LELP1Q5T871 98 aa3.28□□□□□ -1.88
PDLIM5-214ENST00000510099 SFTA2Q6UW10 78 aa3.28□□□□□ -1.88
PDLIM5-214ENST00000510099 SOSTDC1Q6X4U4 206 aa3.28□□□□□ -1.88
PDLIM5-214ENST00000510099 ARL17AQ8IVW1 177 aa3.28□□□□□ -1.88
PDLIM5-214ENST00000510099 C3orf56Q8N813 242 aa3.28□□□□□ -1.88
PDLIM5-214ENST00000510099 DAND5Q8N907 189 aa3.28□□□□□ -1.88
PDLIM5-214ENST00000510099 COPS9Q8WXC6 57 aa3.28□□□□□ -1.88
PDLIM5-214ENST00000510099 RETNQ9HD89 108 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms