RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 TRAV1-2A0A0B4J238 106 aa-0.29□□□□□ -2.46
GYPB-210ENST00000508841 CLPSL1A2RUU4 121 aa-0.29□□□□□ -2.46
GYPB-210ENST00000508841 MT1HP80294 61 aa-0.29□□□□□ -2.46
GYPB-210ENST00000508841 TCEAL4Q96EI5 215 aa-0.29□□□□□ -2.46
GYPB-210ENST00000508841 CNFNQ9BYD5 112 aa-0.29□□□□□ -2.46
GYPB-210ENST00000508841 CENPEQ02224 2701 aa-0.29□□□□□ -2.46
GYPB-210ENST00000508841 CDH23Q9H251 3354 aa-0.29□□□□□ -2.46
GYPB-210ENST00000508841 UTRNP46939 3433 aa-0.29□□□□□ -2.46
GYPB-210ENST00000508841 ZNF609O15014 1411 aa-0.3□□□□□ -2.46
GYPB-210ENST00000508841 KNL1Q8NG31 2342 aa-0.3□□□□□ -2.46
GYPB-210ENST00000508841 CENPFP49454 3210 aa-0.3□□□□□ -2.46
GYPB-210ENST00000508841 PRUNE2Q8WUY3 3088 aa-0.3□□□□□ -2.46
GYPB-210ENST00000508841 LYNX1G3V0Z9 82 aa-0.3□□□□□ -2.46
GYPB-210ENST00000508841 SNCGO76070 127 aa-0.3□□□□□ -2.46
GYPB-210ENST00000508841 MT1HL1P0DM35 61 aa-0.3□□□□□ -2.46
GYPB-210ENST00000508841 TSTD1Q8NFU3 115 aa-0.3□□□□□ -2.46
GYPB-210ENST00000508841 MAFIPQ8WZ33 124 aa-0.3□□□□□ -2.46
GYPB-210ENST00000508841 ASXL1Q8IXJ9 1541 aa-0.3□□□□□ -2.46
GYPB-210ENST00000508841 MED14O60244 1454 aa-0.3□□□□□ -2.46
GYPB-210ENST00000508841 SMG6Q86US8 1419 aaKnown RBP-0.3□□□□□ -2.46
GYPB-210ENST00000508841 TRRAPQ9Y4A5 3859 aa-0.31□□□□□ -2.46
GYPB-210ENST00000508841 ZZEF1O43149 2961 aa-0.31□□□□□ -2.46
GYPB-210ENST00000508841 HMGXB3Q12766 1538 aa-0.31□□□□□ -2.46
GYPB-210ENST00000508841 G3V318 75 aa-0.31□□□□□ -2.46
GYPB-210ENST00000508841 ALX1Q15699 326 aa-0.31□□□□□ -2.46
GYPB-210ENST00000508841 BAGE3Q86Y29 109 aa-0.31□□□□□ -2.46
GYPB-210ENST00000508841 KCNRGQ8N5I3 272 aa-0.31□□□□□ -2.46
GYPB-210ENST00000508841 ANP32BQ92688 251 aaKnown RBP-0.31□□□□□ -2.46
GYPB-210ENST00000508841 LAMC1P11047 1609 aa-0.31□□□□□ -2.46
GYPB-210ENST00000508841 MYH9P35579 1960 aaKnown RBP-0.32□□□□□ -2.46
GYPB-210ENST00000508841 AKAP6Q13023 2319 aa-0.32□□□□□ -2.46
GYPB-210ENST00000508841 SPTBN5Q9NRC6 3674 aaKnown RBP-0.32□□□□□ -2.46
GYPB-210ENST00000508841 MT1GP13640 62 aa-0.32□□□□□ -2.46
GYPB-210ENST00000508841 COPZ1P61923 177 aa-0.32□□□□□ -2.46
GYPB-210ENST00000508841 CCL8P80075 99 aa-0.32□□□□□ -2.46
GYPB-210ENST00000508841 DEFA5Q01523 94 aa-0.32□□□□□ -2.46
GYPB-210ENST00000508841 SMIM21Q3B7S5 101 aa-0.32□□□□□ -2.46
GYPB-210ENST00000508841 XIRP2A4UGR9 3374 aa-0.32□□□□□ -2.46
GYPB-210ENST00000508841 PPRC1Q5VV67 1664 aaKnown RBP-0.33□□□□□ -2.46
GYPB-210ENST00000508841 FAM92AA1XBS5 289 aa-0.33□□□□□ -2.46
GYPB-210ENST00000508841 H0YAA0 97 aa-0.33□□□□□ -2.46
GYPB-210ENST00000508841 CFDP00746 253 aaPredicted RBP-0.33□□□□□ -2.46
GYPB-210ENST00000508841 MT1FP04733 61 aa-0.33□□□□□ -2.46
GYPB-210ENST00000508841 MT1MQ8N339 61 aa-0.33□□□□□ -2.46
GYPB-210ENST00000508841 DEFB123Q8N688 67 aa-0.33□□□□□ -2.46
GYPB-210ENST00000508841 SPTSSBQ8NFR3 76 aa-0.33□□□□□ -2.46
GYPB-210ENST00000508841 TMEM191AQ9H0A3 160 aa-0.33□□□□□ -2.46
GYPB-210ENST00000508841 AKAP9Q99996 3911 aa-0.33□□□□□ -2.46
GYPB-210ENST00000508841 GOLGB1Q14789 3259 aaKnown RBP-0.33□□□□□ -2.46
GYPB-210ENST00000508841 USF3Q68DE3 2245 aa-0.34□□□□□ -2.46
GYPB-210ENST00000508841 RPS25P62851 125 aaKnown RBP-0.34□□□□□ -2.46
GYPB-210ENST00000508841 SMG1Q96Q15 3661 aaKnown RBP-0.34□□□□□ -2.46
GYPB-210ENST00000508841 TPT1P8Q9HAU6 139 aa-0.34□□□□□ -2.46
GYPB-210ENST00000508841 IFT172Q9UG01 1749 aa-0.34□□□□□ -2.46
GYPB-210ENST00000508841 ZMYM4Q5VZL5 1548 aa-0.34□□□□□ -2.46
GYPB-210ENST00000508841 UBR3Q6ZT12 1888 aa-0.35□□□□□ -2.46
GYPB-210ENST00000508841 DMDP11532 3685 aa-0.35□□□□□ -2.46
GYPB-210ENST00000508841 TJP1Q07157 1748 aa-0.35□□□□□ -2.47
GYPB-210ENST00000508841 TIAM2Q8IVF5 1701 aa-0.35□□□□□ -2.47
GYPB-210ENST00000508841 NWD2Q9ULI1 1742 aa-0.35□□□□□ -2.47
GYPB-210ENST00000508841 MT2AP02795 61 aa-0.35□□□□□ -2.47
GYPB-210ENST00000508841 PAPPAQ13219 1627 aa-0.35□□□□□ -2.47
GYPB-210ENST00000508841 BIVM-ERCC5R4GMW8 1640 aa-0.35□□□□□ -2.47
GYPB-210ENST00000508841 VPS13AQ96RL7 3174 aa-0.35□□□□□ -2.47
GYPB-210ENST00000508841 MT1AP04731 61 aa-0.36□□□□□ -2.47
GYPB-210ENST00000508841 LINC00312Q9Y6C7 94 aa-0.36□□□□□ -2.47
GYPB-210ENST00000508841 MAGI2Q86UL8 1455 aa-0.36□□□□□ -2.47
GYPB-210ENST00000508841 RGPD8O14715 1765 aaPredicted RBP-0.37□□□□□ -2.47
GYPB-210ENST00000508841 RGPD5Q99666 1765 aa-0.37□□□□□ -2.47
GYPB-210ENST00000508841 CICQ96RK0 1608 aaPredicted RBP-0.37□□□□□ -2.47
GYPB-210ENST00000508841 COX6B2Q6YFQ2 88 aa-0.37□□□□□ -2.47
GYPB-210ENST00000508841 CCDC167Q9P0B6 97 aa-0.37□□□□□ -2.47
GYPB-210ENST00000508841 PRO0255Q9UI72 69 aa-0.37□□□□□ -2.47
GYPB-210ENST00000508841 MYH8P13535 1937 aa-0.37□□□□□ -2.47
GYPB-210ENST00000508841 PXDNQ92626 1479 aa-0.37□□□□□ -2.47
GYPB-210ENST00000508841 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.37□□□□□ -2.47
GYPB-210ENST00000508841 DOCK1Q14185 1865 aa-0.37□□□□□ -2.47
GYPB-210ENST00000508841 NHSL1Q5SYE7 1610 aa-0.38□□□□□ -2.47
GYPB-210ENST00000508841 ALKQ9UM73 1620 aa-0.38□□□□□ -2.47
GYPB-210ENST00000508841 FMN2Q9NZ56 1722 aa-0.38□□□□□ -2.47
GYPB-210ENST00000508841 MT1EP04732 61 aa-0.38□□□□□ -2.47
GYPB-210ENST00000508841 MT1XP80297 61 aa-0.38□□□□□ -2.47
GYPB-210ENST00000508841 SMCO1Q147U7 214 aa-0.38□□□□□ -2.47
GYPB-210ENST00000508841 KRTAP19-2Q3LHN2 52 aa-0.38□□□□□ -2.47
GYPB-210ENST00000508841 DPH3Q96FX2 82 aa-0.38□□□□□ -2.47
GYPB-210ENST00000508841 ADGRL2O95490 1459 aa-0.38□□□□□ -2.47
GYPB-210ENST00000508841 IQSEC2Q5JU85 1478 aa-0.38□□□□□ -2.47
GYPB-210ENST00000508841 ZNF518AQ6AHZ1 1483 aa-0.38□□□□□ -2.47
GYPB-210ENST00000508841 MRC2Q9UBG0 1479 aa-0.38□□□□□ -2.47
GYPB-210ENST00000508841 SPEF2Q9C093 1822 aa-0.38□□□□□ -2.47
GYPB-210ENST00000508841 IFT140Q96RY7 1462 aa-0.39□□□□□ -2.47
GYPB-210ENST00000508841 PIGBOS1A0A0B4J2F0 54 aa-0.39□□□□□ -2.47
GYPB-210ENST00000508841 HAMPP81172 84 aa-0.39□□□□□ -2.47
GYPB-210ENST00000508841 KLK9Q2XQG4 91 aa-0.39□□□□□ -2.47
GYPB-210ENST00000508841 DEFB121Q5J5C9 76 aa-0.39□□□□□ -2.47
GYPB-210ENST00000508841 S100A7L2Q5SY68 101 aa-0.39□□□□□ -2.47
GYPB-210ENST00000508841 DEFB104AQ8WTQ1 72 aa-0.39□□□□□ -2.47
GYPB-210ENST00000508841 PFDN5Q99471 154 aa-0.39□□□□□ -2.47
GYPB-210ENST00000508841 SEC11CQ9BY50 192 aa-0.39□□□□□ -2.47
GYPB-210ENST00000508841 PAIP2BQ9ULR5 123 aaKnown RBP-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms