RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 LGALS3P17931 250 aaKnown RBP5.52□□□□□ -1.53
NR1I3-226ENST00000508740 HERVK_113P63121 156 aa5.52□□□□□ -1.53
NR1I3-226ENST00000508740 SEC11AP67812 179 aa5.52□□□□□ -1.53
NR1I3-226ENST00000508740 COX6A2Q02221 97 aa5.52□□□□□ -1.53
NR1I3-226ENST00000508740 TAL2Q16559 108 aa5.52□□□□□ -1.53
NR1I3-226ENST00000508740 LINC00242Q5T6M2 205 aa5.52□□□□□ -1.53
NR1I3-226ENST00000508740 XP32Q5T750 250 aa5.52□□□□□ -1.53
NR1I3-226ENST00000508740 LINC00469Q8N7U9 141 aa5.52□□□□□ -1.53
NR1I3-226ENST00000508740 C11orf68Q9H3H3 251 aaKnown RBP5.52□□□□□ -1.53
NR1I3-226ENST00000508740 IGLV4-60A0A075B6I1 120 aa5.51□□□□□ -1.53
NR1I3-226ENST00000508740 IGHV3-64A0A075B6Q5 118 aa5.51□□□□□ -1.53
NR1I3-226ENST00000508740 TMEM262E9PQX1 116 aa5.51□□□□□ -1.53
NR1I3-226ENST00000508740 K7EIL1 84 aa5.51□□□□□ -1.53
NR1I3-226ENST00000508740 PLA2G1BP04054 148 aaKnown RBP5.51□□□□□ -1.53
NR1I3-226ENST00000508740 MRPL23Q16540 153 aaKnown RBP5.51□□□□□ -1.53
NR1I3-226ENST00000508740 SCGB1D4Q6XE38 83 aa5.51□□□□□ -1.53
NR1I3-226ENST00000508740 SH2D6Q7Z4S9 175 aa5.51□□□□□ -1.53
NR1I3-226ENST00000508740 CEND1Q8N111 149 aa5.51□□□□□ -1.53
NR1I3-226ENST00000508740 TM2D2Q9BX73 214 aa5.51□□□□□ -1.53
NR1I3-226ENST00000508740 CDKN2A-AS1Q9UH64 79 aa5.51□□□□□ -1.53
NR1I3-226ENST00000508740 COL7A1Q02388 2944 aa5.51□□□□□ -1.53
NR1I3-226ENST00000508740 DYNC2H1Q8NCM8 4307 aaKnown RBP5.5□□□□□ -1.53
NR1I3-226ENST00000508740 TRAV8-3A0A0A6YYJ7 113 aa5.5□□□□□ -1.53
NR1I3-226ENST00000508740 A0A1B0GUV1 79 aa5.5□□□□□ -1.53
NR1I3-226ENST00000508740 A6NDN8 102 aa5.5□□□□□ -1.53
NR1I3-226ENST00000508740 TAX1BP3O14907 124 aa5.5□□□□□ -1.53
NR1I3-226ENST00000508740 PRB2P02812 416 aaPredicted RBP5.5□□□□□ -1.53
NR1I3-226ENST00000508740 SPINK8P0C7L1 97 aa5.5□□□□□ -1.53
NR1I3-226ENST00000508740 IGHV3-30-3P0DP02 117 aa5.5□□□□□ -1.53
NR1I3-226ENST00000508740 GCSHP23434 173 aa5.5□□□□□ -1.53
NR1I3-226ENST00000508740 RBX1P62877 108 aa5.5□□□□□ -1.53
NR1I3-226ENST00000508740 HIST1H4GQ99525 98 aa5.5□□□□□ -1.53
NR1I3-226ENST00000508740 ICOSQ9Y6W8 199 aa5.5□□□□□ -1.53
NR1I3-226ENST00000508740 A0A0J9YWU9 116 aa5.49□□□□□ -1.53
NR1I3-226ENST00000508740 PTTG1IPP53801 180 aa5.49□□□□□ -1.53
NR1I3-226ENST00000508740 FXYD2P54710 66 aa5.49□□□□□ -1.53
NR1I3-226ENST00000508740 Q6ZVH6 145 aa5.49□□□□□ -1.53
NR1I3-226ENST00000508740 SPATA25Q9BR10 227 aa5.49□□□□□ -1.53
NR1I3-226ENST00000508740 COX11Q9Y6N1 276 aa5.49□□□□□ -1.53
NR1I3-226ENST00000508740 IGLV5-39A0A0G2JS06 123 aa5.48□□□□□ -1.53
NR1I3-226ENST00000508740 H3BNG1 76 aa5.48□□□□□ -1.53
NR1I3-226ENST00000508740 C3orf84H3BNL1 204 aa5.48□□□□□ -1.53
NR1I3-226ENST00000508740 NHLRC4P0CG21 123 aaPredicted RBP5.48□□□□□ -1.53
NR1I3-226ENST00000508740 SRSF9Q13242 221 aaKnown RBP eCLIP5.48□□□□□ -1.53
NR1I3-226ENST00000508740 DEFB121Q5J5C9 76 aa5.48□□□□□ -1.53
NR1I3-226ENST00000508740 LELP1Q5T871 98 aa5.48□□□□□ -1.53
NR1I3-226ENST00000508740 Q6ZTC4 211 aa5.48□□□□□ -1.53
NR1I3-226ENST00000508740 TM2D3Q9BRN9 247 aa5.48□□□□□ -1.53
NR1I3-226ENST00000508740 SPANXB1Q9NS25 103 aaPredicted RBP5.48□□□□□ -1.53
NR1I3-226ENST00000508740 IGKV3OR2-268A0A0C4DH90 116 aa5.47□□□□□ -1.53
NR1I3-226ENST00000508740 A0A0J9YXY3 114 aa5.47□□□□□ -1.53
NR1I3-226ENST00000508740 LINC00959A0A1B0GUT2 108 aa5.47□□□□□ -1.53
NR1I3-226ENST00000508740 SMIM1B2RUZ4 78 aa5.47□□□□□ -1.53
NR1I3-226ENST00000508740 K7EP13 123 aa5.47□□□□□ -1.53
NR1I3-226ENST00000508740 SMIM13P0DJ93 91 aa5.47□□□□□ -1.53
NR1I3-226ENST00000508740 NANOS2P60321 138 aaKnown RBP5.47□□□□□ -1.53
NR1I3-226ENST00000508740 ZFAND6Q6FIF0 208 aa5.47□□□□□ -1.53
NR1I3-226ENST00000508740 LYPD5Q6UWN5 251 aa5.47□□□□□ -1.53
NR1I3-226ENST00000508740 C10orf126Q8N4M7 172 aa5.47□□□□□ -1.53
NR1I3-226ENST00000508740 C11orf45Q8TAV5 145 aa5.47□□□□□ -1.53
NR1I3-226ENST00000508740 B9D2Q9BPU9 175 aa5.47□□□□□ -1.53
NR1I3-226ENST00000508740 NDUFA12Q9UI09 145 aa5.47□□□□□ -1.53
NR1I3-226ENST00000508740 NDUFA1O15239 70 aa5.46□□□□□ -1.54
NR1I3-226ENST00000508740 CCL25O15444 150 aa5.46□□□□□ -1.54
NR1I3-226ENST00000508740 IGHV3-30P01768 117 aa5.46□□□□□ -1.54
NR1I3-226ENST00000508740 IGHV3-30-5P0DP03 117 aa5.46□□□□□ -1.54
NR1I3-226ENST00000508740 DNAH1Q9P2D7 4330 aa5.46□□□□□ -1.54
NR1I3-226ENST00000508740 DEFB131BA0A096LNP1 70 aa5.45□□□□□ -1.54
NR1I3-226ENST00000508740 IGHV3OR16-9A0A0B4J2B5 98 aa5.45□□□□□ -1.54
NR1I3-226ENST00000508740 A0A1B0GWB2 263 aa5.45□□□□□ -1.54
NR1I3-226ENST00000508740 C9orf118A6NHY6 69 aa5.45□□□□□ -1.54
NR1I3-226ENST00000508740 SS18Q15532 418 aa5.45□□□□□ -1.54
NR1I3-226ENST00000508740 LINC00269Q8N2A0 174 aa5.45□□□□□ -1.54
NR1I3-226ENST00000508740 NHP2Q9NX24 153 aaKnown RBP5.45□□□□□ -1.54
NR1I3-226ENST00000508740 A0A087WZ39 114 aa5.44□□□□□ -1.54
NR1I3-226ENST00000508740 TMEM238C9JI98 176 aa5.44□□□□□ -1.54
NR1I3-226ENST00000508740 K7ERJ3 54 aa5.44□□□□□ -1.54
NR1I3-226ENST00000508740 TIMM17BO60830 172 aa5.44□□□□□ -1.54
NR1I3-226ENST00000508740 RAB37Q96AX2 223 aa5.44□□□□□ -1.54
NR1I3-226ENST00000508740 LITAFQ99732 161 aa5.44□□□□□ -1.54
NR1I3-226ENST00000508740 Q9H8V8 135 aa5.44□□□□□ -1.54
NR1I3-226ENST00000508740 STAB2Q8WWQ8 2551 aa5.43□□□□□ -1.54
NR1I3-226ENST00000508740 ANGP03950 147 aaKnown RBP5.43□□□□□ -1.54
NR1I3-226ENST00000508740 XCL1P47992 114 aa5.43□□□□□ -1.54
NR1I3-226ENST00000508740 VAMP3Q15836 100 aa5.43□□□□□ -1.54
NR1I3-226ENST00000508740 ADAMTSL4-AS1Q5T5F5 129 aa5.43□□□□□ -1.54
NR1I3-226ENST00000508740 CLPSL2Q6UWE3 100 aa5.43□□□□□ -1.54
NR1I3-226ENST00000508740 C5orf38Q86SI9 138 aa5.43□□□□□ -1.54
NR1I3-226ENST00000508740 MUSTN1Q8IVN3 82 aa5.43□□□□□ -1.54
NR1I3-226ENST00000508740 LINC01561Q8N1V8 128 aa5.43□□□□□ -1.54
NR1I3-226ENST00000508740 SPANXDQ9BXN6 97 aa5.43□□□□□ -1.54
NR1I3-226ENST00000508740 SPANXCQ9NY87 97 aa5.43□□□□□ -1.54
NR1I3-226ENST00000508740 TRAV10A0A0B4J240 114 aa5.42□□□□□ -1.54
NR1I3-226ENST00000508740 H3BUT2 72 aa5.42□□□□□ -1.54
NR1I3-226ENST00000508740 RPL24P83731 157 aaKnown RBP5.42□□□□□ -1.54
NR1I3-226ENST00000508740 REG3AQ06141 175 aa5.42□□□□□ -1.54
NR1I3-226ENST00000508740 CIRBPQ14011 172 aaKnown RBP5.42□□□□□ -1.54
NR1I3-226ENST00000508740 ESRGQ1W209 222 aa5.42□□□□□ -1.54
NR1I3-226ENST00000508740 CD164L2Q6UWJ8 174 aa5.42□□□□□ -1.54
NR1I3-226ENST00000508740 COX7B2Q8TF08 81 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms