RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 STHQ8IWL8 128 aa9.52□□□□□ -0.89
SNCAIP-209ENST00000508017 IGHV4-31P0DP07 118 aa9.52□□□□□ -0.89
SNCAIP-209ENST00000508017 HERV-K104P63124 156 aa9.52□□□□□ -0.89
SNCAIP-209ENST00000508017 LRRK2Q5S007 2527 aa9.52□□□□□ -0.89
SNCAIP-209ENST00000508017 ZNF469Q96JG9 3925 aaPredicted RBP9.51□□□□□ -0.89
SNCAIP-209ENST00000508017 PTPN13Q12923 2485 aa9.51□□□□□ -0.89
SNCAIP-209ENST00000508017 LOC100131303A0A0U1RQF7 123 aa9.51□□□□□ -0.89
SNCAIP-209ENST00000508017 LINC00643Q86TS7 51 aa9.51□□□□□ -0.89
SNCAIP-209ENST00000508017 LINC00337Q8N6G1 96 aa9.51□□□□□ -0.89
SNCAIP-209ENST00000508017 CACNA1AO00555 2505 aa9.51□□□□□ -0.89
SNCAIP-209ENST00000508017 TRBV10-1A0A0K0K1A3 114 aa9.51□□□□□ -0.89
SNCAIP-209ENST00000508017 MIR7-3HGQ8N6C7 128 aa9.51□□□□□ -0.89
SNCAIP-209ENST00000508017 PIEZO1Q92508 2521 aa9.5□□□□□ -0.89
SNCAIP-209ENST00000508017 IGKV2-28A0A075B6P5 120 aa9.5□□□□□ -0.89
SNCAIP-209ENST00000508017 IGKV3OR2-268A0A0C4DH90 116 aa9.5□□□□□ -0.89
SNCAIP-209ENST00000508017 IGKV2D-28P01615 120 aa9.5□□□□□ -0.89
SNCAIP-209ENST00000508017 HIST2H2BCQ6DN03 193 aa9.5□□□□□ -0.89
SNCAIP-209ENST00000508017 C11orf44Q8N8P7 122 aa9.5□□□□□ -0.89
SNCAIP-209ENST00000508017 NOP10Q9NPE3 64 aaKnown RBP9.5□□□□□ -0.89
SNCAIP-209ENST00000508017 UBE2L6O14933 153 aa9.5□□□□□ -0.89
SNCAIP-209ENST00000508017 GAGE2AQ6NT46 116 aa9.5□□□□□ -0.89
SNCAIP-209ENST00000508017 IMUPQ9GZP8 106 aa9.5□□□□□ -0.89
SNCAIP-209ENST00000508017 TOMM7Q9P0U1 55 aa9.5□□□□□ -0.89
SNCAIP-209ENST00000508017 SETD2Q9BYW2 2564 aaPredicted RBP9.49□□□□□ -0.89
SNCAIP-209ENST00000508017 SDIM1Q6ZPB5 146 aa9.49□□□□□ -0.89
SNCAIP-209ENST00000508017 TMEM243Q9BU79 118 aa9.49□□□□□ -0.89
SNCAIP-209ENST00000508017 CRPP02741 224 aa9.48□□□□□ -0.89
SNCAIP-209ENST00000508017 RPL28P46779 137 aaKnown RBP9.48□□□□□ -0.89
SNCAIP-209ENST00000508017 C9orf129Q5T035 196 aaKnown RBP9.48□□□□□ -0.89
SNCAIP-209ENST00000508017 A0A087WYN8 130 aa9.48□□□□□ -0.89
SNCAIP-209ENST00000508017 A0A1W2PRX2 142 aa9.48□□□□□ -0.89
SNCAIP-209ENST00000508017 MALP21145 153 aa9.48□□□□□ -0.89
SNCAIP-209ENST00000508017 FAM222AQ5U5X8 452 aa9.48□□□□□ -0.89
SNCAIP-209ENST00000508017 COX7B2Q8TF08 81 aa9.48□□□□□ -0.89
SNCAIP-209ENST00000508017 FAM110AQ9BQ89 295 aa9.48□□□□□ -0.89
SNCAIP-209ENST00000508017 SND1-IT1Q9HBX3 110 aa9.48□□□□□ -0.89
SNCAIP-209ENST00000508017 SONP18583 2426 aaKnown RBP9.48□□□□□ -0.89
SNCAIP-209ENST00000508017 TRAV13-2A0A0B4J235 113 aa9.47□□□□□ -0.89
SNCAIP-209ENST00000508017 NAV2Q8IVL1 2488 aa9.47□□□□□ -0.89
SNCAIP-209ENST00000508017 SMIM11BQ8TCY0 68 aa9.46□□□□□ -0.89
SNCAIP-209ENST00000508017 PLA2G2AP14555 144 aa9.46□□□□□ -0.9
SNCAIP-209ENST00000508017 LINC00158P58513 81 aa9.45□□□□□ -0.9
SNCAIP-209ENST00000508017 IGLV4-60A0A075B6I1 120 aa9.45□□□□□ -0.9
SNCAIP-209ENST00000508017 INAFM2P0DMQ5 153 aa9.45□□□□□ -0.9
SNCAIP-209ENST00000508017 WFDC10AQ9H1F0 79 aa9.45□□□□□ -0.9
SNCAIP-209ENST00000508017 PPDPFQ9H3Y8 114 aa9.45□□□□□ -0.9
SNCAIP-209ENST00000508017 ZFYVE26Q68DK2 2539 aa9.45□□□□□ -0.9
SNCAIP-209ENST00000508017 PLAC8L1A1L4L8 177 aa9.44□□□□□ -0.9
SNCAIP-209ENST00000508017 PF4P02776 101 aa9.44□□□□□ -0.9
SNCAIP-209ENST00000508017 ATP5G1P05496 136 aa9.44□□□□□ -0.9
SNCAIP-209ENST00000508017 GIG44P09565 113 aaPredicted RBP9.44□□□□□ -0.9
SNCAIP-209ENST00000508017 CCL18P55774 89 aa9.44□□□□□ -0.9
SNCAIP-209ENST00000508017 KRTAP10-9P60411 292 aa9.44□□□□□ -0.9
SNCAIP-209ENST00000508017 C5orf38Q86SI9 138 aa9.44□□□□□ -0.9
SNCAIP-209ENST00000508017 TRGV2A0A075B6R0 118 aa9.43□□□□□ -0.9
SNCAIP-209ENST00000508017 C9orf153Q5TBE3 101 aa9.43□□□□□ -0.9
SNCAIP-209ENST00000508017 C3orf22Q8N5N4 141 aa9.43□□□□□ -0.9
SNCAIP-209ENST00000508017 C14orf132Q9NPU4 83 aa9.43□□□□□ -0.9
SNCAIP-209ENST00000508017 PFN2P35080 140 aa9.43□□□□□ -0.9
SNCAIP-209ENST00000508017 TMEM126AQ9H061 195 aa9.43□□□□□ -0.9
SNCAIP-209ENST00000508017 DNAL4O96015 105 aa9.42□□□□□ -0.9
SNCAIP-209ENST00000508017 TRAV25A0A0B4J276 109 aa9.42□□□□□ -0.9
SNCAIP-209ENST00000508017 ZNF462Q96JM2 2506 aa9.41□□□□□ -0.9
SNCAIP-209ENST00000508017 IGHV3OR16-9A0A0B4J2B5 98 aa9.41□□□□□ -0.9
SNCAIP-209ENST00000508017 RPL35AP18077 110 aaKnown RBP9.41□□□□□ -0.9
SNCAIP-209ENST00000508017 CXCL5P42830 114 aa9.41□□□□□ -0.9
SNCAIP-209ENST00000508017 C11orf68Q9H3H3 251 aaKnown RBP9.41□□□□□ -0.9
SNCAIP-209ENST00000508017 CCL24O00175 119 aa9.4□□□□□ -0.9
SNCAIP-209ENST00000508017 LECT2O14960 151 aa9.4□□□□□ -0.9
SNCAIP-209ENST00000508017 SLPIP03973 132 aa9.4□□□□□ -0.9
SNCAIP-209ENST00000508017 TRGV4A0A0C4DH28 118 aa9.4□□□□□ -0.91
SNCAIP-209ENST00000508017 UQCRQO14949 82 aa9.4□□□□□ -0.91
SNCAIP-209ENST00000508017 KLK5Q9Y337 293 aaPredicted RBP9.4□□□□□ -0.91
SNCAIP-209ENST00000508017 ITPR3Q14573 2671 aa9.39□□□□□ -0.91
SNCAIP-209ENST00000508017 TRBV6-4A0A1B0GX49 114 aa9.39□□□□□ -0.91
SNCAIP-209ENST00000508017 LRRC75A-AS1Q8N1F1 130 aa9.39□□□□□ -0.91
SNCAIP-209ENST00000508017 IGKV3D-7A0A0C4DH55 119 aa9.39□□□□□ -0.91
SNCAIP-209ENST00000508017 NCR3O14931 201 aa9.39□□□□□ -0.91
SNCAIP-209ENST00000508017 PAX4O43316 350 aa9.39□□□□□ -0.91
SNCAIP-209ENST00000508017 OR13C6PQ8NH95 151 aa9.39□□□□□ -0.91
SNCAIP-209ENST00000508017 C16orf74Q96GX8 76 aa9.39□□□□□ -0.91
SNCAIP-209ENST00000508017 TRBV6-8A0A0A6YYG3 113 aa9.38□□□□□ -0.91
SNCAIP-209ENST00000508017 LINC00526Q96FQ7 95 aa9.38□□□□□ -0.91
SNCAIP-209ENST00000508017 OVOL2Q9BRP0 275 aa9.38□□□□□ -0.91
SNCAIP-209ENST00000508017 LINC00846Q9NV44 126 aa9.38□□□□□ -0.91
SNCAIP-209ENST00000508017 A0A087WZ39 114 aa9.37□□□□□ -0.91
SNCAIP-209ENST00000508017 IBA57-AS1B1ANH7 110 aa9.37□□□□□ -0.91
SNCAIP-209ENST00000508017 C2orf48Q96LS8 159 aa9.37□□□□□ -0.91
SNCAIP-209ENST00000508017 APCP25054 2843 aa9.37□□□□□ -0.91
SNCAIP-209ENST00000508017 H0YGX0 51 aa9.37□□□□□ -0.91
SNCAIP-209ENST00000508017 HIST1H4AP62805 103 aaKnown RBP9.37□□□□□ -0.91
SNCAIP-209ENST00000508017 OBSCN-AS1Q96MR7 158 aa9.37□□□□□ -0.91
SNCAIP-209ENST00000508017 FHL2Q14192 279 aa9.36□□□□□ -0.91
SNCAIP-209ENST00000508017 UBR5O95071 2799 aaPredicted RBP9.36□□□□□ -0.91
SNCAIP-209ENST00000508017 COX7CP15954 63 aa9.36□□□□□ -0.91
SNCAIP-209ENST00000508017 CCDC168Q8NDH2 2452 aa9.36□□□□□ -0.91
SNCAIP-209ENST00000508017 DNAJC9-AS1A6NH13 148 aa9.35□□□□□ -0.91
SNCAIP-209ENST00000508017 PRB1P04280 392 aa9.35□□□□□ -0.91
SNCAIP-209ENST00000508017 CSNK1G2-AS1Q8NCQ2 148 aa9.35□□□□□ -0.91
SNCAIP-209ENST00000508017 FN1P02751 2386 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms