RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 OR10D4PQ8NGN7 298 aa3.95□□□□□ -1.78
VCAN-207ENST00000507162 ACTR3CQ9C0K3 210 aaPredicted RBP3.95□□□□□ -1.78
VCAN-207ENST00000507162 NDUFA12Q9UI09 145 aa3.95□□□□□ -1.78
VCAN-207ENST00000507162 C5orf52A6NGY3 159 aa3.94□□□□□ -1.78
VCAN-207ENST00000507162 VCYO14598 125 aa3.94□□□□□ -1.78
VCAN-207ENST00000507162 ATP6V1G2O95670 118 aa3.94□□□□□ -1.78
VCAN-207ENST00000507162 AKR1C3P42330 323 aa3.94□□□□□ -1.78
VCAN-207ENST00000507162 CNPY1Q3B7I2 92 aa3.94□□□□□ -1.78
VCAN-207ENST00000507162 GATD1Q8NB37 220 aa3.94□□□□□ -1.78
VCAN-207ENST00000507162 RPL39LQ96EH5 51 aaKnown RBP3.94□□□□□ -1.78
VCAN-207ENST00000507162 CYTL1Q9NRR1 136 aa3.94□□□□□ -1.78
VCAN-207ENST00000507162 SDHAF1A6NFY7 115 aa3.93□□□□□ -1.78
VCAN-207ENST00000507162 FAM74A7A6NL05 159 aa3.93□□□□□ -1.78
VCAN-207ENST00000507162 NDUFC2-KCTD14E9PQ53 114 aa3.93□□□□□ -1.78
VCAN-207ENST00000507162 INMT-MINDY4F8WBC2 141 aa3.93□□□□□ -1.78
VCAN-207ENST00000507162 TRGC1P0CF51 173 aa3.93□□□□□ -1.78
VCAN-207ENST00000507162 MRPL55Q7Z7F7 128 aaKnown RBP3.93□□□□□ -1.78
VCAN-207ENST00000507162 MRAP2Q96G30 205 aa3.93□□□□□ -1.78
VCAN-207ENST00000507162 PACRGQ96M98 296 aaPredicted RBP3.93□□□□□ -1.78
VCAN-207ENST00000507162 NKX6-2Q9C056 277 aaPredicted RBP3.93□□□□□ -1.78
VCAN-207ENST00000507162 LINC00846Q9NV44 126 aa3.93□□□□□ -1.78
VCAN-207ENST00000507162 I3L3M4 83 aa3.92□□□□□ -1.78
VCAN-207ENST00000507162 MBP02144 154 aa3.92□□□□□ -1.78
VCAN-207ENST00000507162 ATP6V0CP27449 155 aa3.92□□□□□ -1.78
VCAN-207ENST00000507162 S100A5P33763 92 aa3.92□□□□□ -1.78
VCAN-207ENST00000507162 C2orf82Q6UX34 121 aa3.92□□□□□ -1.78
VCAN-207ENST00000507162 BAGE2Q86Y30 109 aa3.92□□□□□ -1.78
VCAN-207ENST00000507162 STOML3Q8TAV4 291 aa3.92□□□□□ -1.78
VCAN-207ENST00000507162 CCDC160A6NGH7 325 aa3.91□□□□□ -1.78
VCAN-207ENST00000507162 MRPL52Q86TS9 123 aaKnown RBP3.91□□□□□ -1.78
VCAN-207ENST00000507162 LINC00167Q96N53 147 aa3.91□□□□□ -1.78
VCAN-207ENST00000507162 XAGE1AQ9HD64 81 aa3.91□□□□□ -1.78
VCAN-207ENST00000507162 TMEM242Q9NWH2 141 aa3.91□□□□□ -1.78
VCAN-207ENST00000507162 ZNF727A8MUV8 499 aa3.9□□□□□ -1.79
VCAN-207ENST00000507162 UPK1BO75841 260 aa3.9□□□□□ -1.79
VCAN-207ENST00000507162 IGLC6P0CF74 106 aa3.9□□□□□ -1.79
VCAN-207ENST00000507162 FOXA3P55318 350 aaPredicted RBP3.9□□□□□ -1.79
VCAN-207ENST00000507162 TWIST1Q15672 202 aa3.9□□□□□ -1.79
VCAN-207ENST00000507162 Q6Q795 121 aa3.9□□□□□ -1.79
VCAN-207ENST00000507162 LYZL1Q6UWQ5 148 aa3.9□□□□□ -1.79
VCAN-207ENST00000507162 Q8NBF4 154 aa3.9□□□□□ -1.79
VCAN-207ENST00000507162 NUDT15Q9NV35 164 aa3.9□□□□□ -1.79
VCAN-207ENST00000507162 TRBV30A0A0K0K1B3 111 aa3.89□□□□□ -1.79
VCAN-207ENST00000507162 C7orf77A4D0Y5 90 aa3.89□□□□□ -1.79
VCAN-207ENST00000507162 F2Z2F3 143 aa3.89□□□□□ -1.79
VCAN-207ENST00000507162 SPINK1P00995 79 aa3.89□□□□□ -1.79
VCAN-207ENST00000507162 KRTAP13-1Q8IUC0 172 aa3.89□□□□□ -1.79
VCAN-207ENST00000507162 PPP1R1CQ8WVI7 109 aa3.89□□□□□ -1.79
VCAN-207ENST00000507162 TP73-AS1Q9UF72 201 aa3.89□□□□□ -1.79
VCAN-207ENST00000507162 NOL3O60936 208 aaKnown RBP3.88□□□□□ -1.79
VCAN-207ENST00000507162 S100A9P06702 114 aaKnown RBP3.88□□□□□ -1.79
VCAN-207ENST00000507162 RPS20P60866 119 aaKnown RBP3.88□□□□□ -1.79
VCAN-207ENST00000507162 PRLHP81277 87 aa3.88□□□□□ -1.79
VCAN-207ENST00000507162 SERF2P84101 59 aa3.88□□□□□ -1.79
VCAN-207ENST00000507162 KIAA0087Q14695 138 aa3.88□□□□□ -1.79
VCAN-207ENST00000507162 ZNF726P1Q15940 193 aa3.88□□□□□ -1.79
VCAN-207ENST00000507162 TMEM18Q96B42 140 aa3.88□□□□□ -1.79
VCAN-207ENST00000507162 PLEKHB2Q96CS7 222 aa3.88□□□□□ -1.79
VCAN-207ENST00000507162 RNASE7Q9H1E1 156 aaKnown RBP3.88□□□□□ -1.79
VCAN-207ENST00000507162 TNFSF18Q9UNG2 199 aa3.88□□□□□ -1.79
VCAN-207ENST00000507162 IGHV3OR16-9A0A0B4J2B5 98 aa3.87□□□□□ -1.79
VCAN-207ENST00000507162 CTXND1A0A1B0GTU2 59 aa3.87□□□□□ -1.79
VCAN-207ENST00000507162 PLA2G10O15496 165 aa3.87□□□□□ -1.79
VCAN-207ENST00000507162 LYRM1O43325 122 aa3.87□□□□□ -1.79
VCAN-207ENST00000507162 MPC2O95563 127 aa3.87□□□□□ -1.79
VCAN-207ENST00000507162 IFNA1P01562 189 aa3.87□□□□□ -1.79
VCAN-207ENST00000507162 RPL32P62910 135 aaKnown RBP3.87□□□□□ -1.79
VCAN-207ENST00000507162 PNRC1Q12796 327 aaPredicted RBP3.87□□□□□ -1.79
VCAN-207ENST00000507162 FAM19A1Q7Z5A9 133 aa3.87□□□□□ -1.79
VCAN-207ENST00000507162 FAM19A2Q8N3H0 131 aa3.87□□□□□ -1.79
VCAN-207ENST00000507162 PSMG3Q9BT73 122 aaPredicted RBP3.87□□□□□ -1.79
VCAN-207ENST00000507162 ST20Q9HBF5 79 aa3.87□□□□□ -1.79
VCAN-207ENST00000507162 XKRY2A2RUG3 117 aa3.86□□□□□ -1.79
VCAN-207ENST00000507162 C9orf92A6NGG3 77 aa3.86□□□□□ -1.79
VCAN-207ENST00000507162 SLC25A20O43772 301 aa3.86□□□□□ -1.79
VCAN-207ENST00000507162 PET100P0DJ07 73 aa3.86□□□□□ -1.79
VCAN-207ENST00000507162 SNRPEP62304 92 aaKnown RBP3.86□□□□□ -1.79
VCAN-207ENST00000507162 SMAGPQ0VAQ4 97 aa3.86□□□□□ -1.79
VCAN-207ENST00000507162 TEX261Q6UWH6 196 aa3.86□□□□□ -1.79
VCAN-207ENST00000507162 Q6ZUT4 128 aa3.86□□□□□ -1.79
VCAN-207ENST00000507162 SMIM15Q7Z3B0 74 aa3.86□□□□□ -1.79
VCAN-207ENST00000507162 CBLN2Q8IUK8 224 aa3.86□□□□□ -1.79
VCAN-207ENST00000507162 IL7P13232 177 aa3.85□□□□□ -1.79
VCAN-207ENST00000507162 FCER1GP30273 86 aa3.85□□□□□ -1.79
VCAN-207ENST00000507162 FHITP49789 147 aa3.85□□□□□ -1.79
VCAN-207ENST00000507162 UBE2V1Q13404 147 aa3.85□□□□□ -1.79
VCAN-207ENST00000507162 GAGE2AQ6NT46 116 aa3.85□□□□□ -1.79
VCAN-207ENST00000507162 TMUB2Q71RG4 321 aa3.85□□□□□ -1.79
VCAN-207ENST00000507162 Q8N377 158 aa3.85□□□□□ -1.79
VCAN-207ENST00000507162 TCEAL7Q9BRU2 100 aa3.85□□□□□ -1.79
VCAN-207ENST00000507162 CCDC32Q9BV29 185 aa3.85□□□□□ -1.79
VCAN-207ENST00000507162 CSDC2Q9Y534 153 aaKnown RBP3.85□□□□□ -1.79
VCAN-207ENST00000507162 MUC12Q9UKN1 5478 aa3.85□□□□□ -1.79
VCAN-207ENST00000507162 IGKV2-28A0A075B6P5 120 aa3.84□□□□□ -1.79
VCAN-207ENST00000507162 TGIF2-C20orf24A0A0A6YYL0 155 aa3.84□□□□□ -1.79
VCAN-207ENST00000507162 IGKV2D-28P01615 120 aa3.84□□□□□ -1.79
VCAN-207ENST00000507162 H2BFSP57053 126 aa3.84□□□□□ -1.79
VCAN-207ENST00000507162 TRBV6-5A0A0K0K1A5 114 aa3.83□□□□□ -1.8
VCAN-207ENST00000507162 RAB19A4D1S5 217 aa3.83□□□□□ -1.8
VCAN-207ENST00000507162 MAP1LC3B2A6NCE7 125 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms