RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 C9orf85Q96MD7 179 aa6.94□□□□□ -1.3
PHF3-208ENST00000506783 IGHV1-58A0A0C4DH39 117 aa6.94□□□□□ -1.3
PHF3-208ENST00000506783 DEFB114Q30KQ6 69 aa6.94□□□□□ -1.3
PHF3-208ENST00000506783 PRO0461Q9UI25 63 aa6.94□□□□□ -1.3
PHF3-208ENST00000506783 Q8N2B8 174 aa6.94□□□□□ -1.3
PHF3-208ENST00000506783 MIR7-3HGQ8N6C7 128 aa6.94□□□□□ -1.3
PHF3-208ENST00000506783 ODF3L2Q3SX64 289 aa6.93□□□□□ -1.3
PHF3-208ENST00000506783 VSIG2Q96IQ7 327 aa6.93□□□□□ -1.3
PHF3-208ENST00000506783 CDIP1Q9H305 208 aa6.93□□□□□ -1.3
PHF3-208ENST00000506783 IGKV3D-7A0A0C4DH55 119 aa6.93□□□□□ -1.3
PHF3-208ENST00000506783 RHOHQ15669 191 aa6.93□□□□□ -1.3
PHF3-208ENST00000506783 AKAP9Q99996 3911 aa6.92□□□□□ -1.3
PHF3-208ENST00000506783 H3BUA1 57 aa6.92□□□□□ -1.3
PHF3-208ENST00000506783 LRRC75A-AS1Q8N1F1 130 aa6.92□□□□□ -1.3
PHF3-208ENST00000506783 Q8N3U1 123 aa6.92□□□□□ -1.3
PHF3-208ENST00000506783 TMEM263Q8WUH6 116 aaKnown RBP6.92□□□□□ -1.3
PHF3-208ENST00000506783 UBE2D4Q9Y2X8 147 aa6.92□□□□□ -1.3
PHF3-208ENST00000506783 DEFB135Q30KP9 77 aa6.91□□□□□ -1.3
PHF3-208ENST00000506783 Q6YL49 198 aa6.91□□□□□ -1.3
PHF3-208ENST00000506783 TRRAPQ9Y4A5 3859 aa6.91□□□□□ -1.3
PHF3-208ENST00000506783 HIST1H4AP62805 103 aaKnown RBP6.91□□□□□ -1.3
PHF3-208ENST00000506783 BAALC-AS2P0C853 105 aa6.91□□□□□ -1.3
PHF3-208ENST00000506783 TMEM243Q9BU79 118 aa6.91□□□□□ -1.3
PHF3-208ENST00000506783 CRPP02741 224 aa6.9□□□□□ -1.3
PHF3-208ENST00000506783 CCDC179H3BU77 68 aa6.9□□□□□ -1.3
PHF3-208ENST00000506783 C9orf116Q5BN46 136 aaPredicted RBP6.9□□□□□ -1.3
PHF3-208ENST00000506783 CHCHD7Q9BUK0 85 aa6.9□□□□□ -1.3
PHF3-208ENST00000506783 IGLV4-60A0A075B6I1 120 aa6.9□□□□□ -1.31
PHF3-208ENST00000506783 GYPEP15421 78 aa6.9□□□□□ -1.31
PHF3-208ENST00000506783 C1orf158Q8N1D5 194 aa6.9□□□□□ -1.31
PHF3-208ENST00000506783 CR1P17927 2039 aa6.9□□□□□ -1.31
PHF3-208ENST00000506783 A8MTW9 85 aa6.89□□□□□ -1.31
PHF3-208ENST00000506783 H7C423 109 aa6.89□□□□□ -1.31
PHF3-208ENST00000506783 ANGP03950 147 aaKnown RBP6.89□□□□□ -1.31
PHF3-208ENST00000506783 UBE2D3P61077 147 aa6.89□□□□□ -1.31
PHF3-208ENST00000506783 UBE2D2P62837 147 aa6.89□□□□□ -1.31
PHF3-208ENST00000506783 LINC00242Q5T6M2 205 aa6.89□□□□□ -1.31
PHF3-208ENST00000506783 SMIM20Q8N5G0 67 aa6.89□□□□□ -1.31
PHF3-208ENST00000506783 MALP21145 153 aa6.89□□□□□ -1.31
PHF3-208ENST00000506783 F5H768 121 aa6.89□□□□□ -1.31
PHF3-208ENST00000506783 FAM19A4Q96LR4 140 aa6.89□□□□□ -1.31
PHF3-208ENST00000506783 SND1-IT1Q9HBX3 110 aa6.89□□□□□ -1.31
PHF3-208ENST00000506783 C14orf132Q9NPU4 83 aa6.89□□□□□ -1.31
PHF3-208ENST00000506783 LINC00308Q8TCZ7 52 aa6.88□□□□□ -1.31
PHF3-208ENST00000506783 K7EQD1 137 aa6.88□□□□□ -1.31
PHF3-208ENST00000506783 MIAQ16674 131 aa6.88□□□□□ -1.31
PHF3-208ENST00000506783 FAM236AA0A1B0GUQ0 79 aa6.88□□□□□ -1.31
PHF3-208ENST00000506783 FAM236BA0A1B0GV22 79 aa6.88□□□□□ -1.31
PHF3-208ENST00000506783 LECT2O14960 151 aa6.88□□□□□ -1.31
PHF3-208ENST00000506783 MED14OSP0DP75 135 aa6.88□□□□□ -1.31
PHF3-208ENST00000506783 SCGB1A1P11684 91 aa6.88□□□□□ -1.31
PHF3-208ENST00000506783 DEFB121Q5J5C9 76 aa6.88□□□□□ -1.31
PHF3-208ENST00000506783 DNAJC30Q96LL9 226 aa6.88□□□□□ -1.31
PHF3-208ENST00000506783 DAZ2Q13117 558 aaKnown RBP6.87□□□□□ -1.31
PHF3-208ENST00000506783 MRPL23Q16540 153 aaKnown RBP6.87□□□□□ -1.31
PHF3-208ENST00000506783 NTM-AS1Q6ZSK4 140 aa6.87□□□□□ -1.31
PHF3-208ENST00000506783 DAZ4Q86SG3 579 aaKnown RBP6.87□□□□□ -1.31
PHF3-208ENST00000506783 AMELXQ99217 191 aa6.87□□□□□ -1.31
PHF3-208ENST00000506783 DAZ3Q9NR90 486 aaKnown RBP6.87□□□□□ -1.31
PHF3-208ENST00000506783 WFDC9Q8NEX5 89 aa6.87□□□□□ -1.31
PHF3-208ENST00000506783 EDA2RQ9HAV5 297 aa6.87□□□□□ -1.31
PHF3-208ENST00000506783 TRBV6-5A0A0K0K1A5 114 aa6.87□□□□□ -1.31
PHF3-208ENST00000506783 TMEM89A2RUT3 159 aa6.87□□□□□ -1.31
PHF3-208ENST00000506783 IFITM1P13164 125 aa6.87□□□□□ -1.31
PHF3-208ENST00000506783 LINC01006Q8NI28 216 aa6.87□□□□□ -1.31
PHF3-208ENST00000506783 SPATA25Q9BR10 227 aa6.87□□□□□ -1.31
PHF3-208ENST00000506783 TRBV10-2A0A0K0K1G8 114 aa6.86□□□□□ -1.31
PHF3-208ENST00000506783 NCR3O14931 201 aa6.86□□□□□ -1.31
PHF3-208ENST00000506783 HERVK_113P63121 156 aa6.86□□□□□ -1.31
PHF3-208ENST00000506783 LINC01546A6NGU7 62 aa6.86□□□□□ -1.31
PHF3-208ENST00000506783 SOSTDC1Q6X4U4 206 aa6.86□□□□□ -1.31
PHF3-208ENST00000506783 SDIM1Q6ZPB5 146 aa6.86□□□□□ -1.31
PHF3-208ENST00000506783 SPANXA1Q9NS26 97 aa6.86□□□□□ -1.31
PHF3-208ENST00000506783 LINC00269Q8N2A0 174 aa6.85□□□□□ -1.31
PHF3-208ENST00000506783 KMT2BQ9UMN6 2715 aaPredicted RBP6.85□□□□□ -1.31
PHF3-208ENST00000506783 MRPS36P82909 103 aaKnown RBP6.85□□□□□ -1.31
PHF3-208ENST00000506783 FAM110AQ9BQ89 295 aa6.84□□□□□ -1.31
PHF3-208ENST00000506783 C4orf3Q8WVX3 66 aa6.83□□□□□ -1.32
PHF3-208ENST00000506783 XAGE1AQ9HD64 81 aa6.83□□□□□ -1.32
PHF3-208ENST00000506783 A0A087WVE0 104 aa6.83□□□□□ -1.32
PHF3-208ENST00000506783 SMIM1B2RUZ4 78 aa6.83□□□□□ -1.32
PHF3-208ENST00000506783 PRB2P02812 416 aaPredicted RBP6.83□□□□□ -1.32
PHF3-208ENST00000506783 CFAP161Q6P656 301 aa6.83□□□□□ -1.32
PHF3-208ENST00000506783 MRAPQ8TCY5 172 aa6.83□□□□□ -1.32
PHF3-208ENST00000506783 NDUFV3P56181 108 aaKnown RBP6.83□□□□□ -1.32
PHF3-208ENST00000506783 S100A7L2Q5SY68 101 aa6.83□□□□□ -1.32
PHF3-208ENST00000506783 C11orf72Q8NBR9 251 aa6.83□□□□□ -1.32
PHF3-208ENST00000506783 COX7B2Q8TF08 81 aa6.83□□□□□ -1.32
PHF3-208ENST00000506783 FAM218AQ96MZ4 157 aa6.83□□□□□ -1.32
PHF3-208ENST00000506783 KLK5Q9Y337 293 aaPredicted RBP6.82□□□□□ -1.32
PHF3-208ENST00000506783 TENM2Q9NT68 2774 aa6.82□□□□□ -1.32
PHF3-208ENST00000506783 A0A0B4J2C4 111 aa6.82□□□□□ -1.32
PHF3-208ENST00000506783 SPATA3Q8NHX4 192 aa6.82□□□□□ -1.32
PHF3-208ENST00000506783 FAM222AQ5U5X8 452 aa6.81□□□□□ -1.32
PHF3-208ENST00000506783 TENM3Q9P273 2699 aa6.81□□□□□ -1.32
PHF3-208ENST00000506783 LAMTOR3Q9UHA4 124 aa6.81□□□□□ -1.32
PHF3-208ENST00000506783 KLK12Q9UKR0 248 aa6.81□□□□□ -1.32
PHF3-208ENST00000506783 A0A087WYN8 130 aa6.81□□□□□ -1.32
PHF3-208ENST00000506783 CDC42SE2Q9NRR3 84 aa6.81□□□□□ -1.32
PHF3-208ENST00000506783 ATP6V0E2Q8NHE4 81 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms