RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 FAM104AQ969W3 186 aa7.19□□□□□ -1.26
SNCA-210ENST00000506691 PACRGQ96M98 296 aaPredicted RBP7.19□□□□□ -1.26
SNCA-210ENST00000506691 FAT1Q14517 4588 aa7.18□□□□□ -1.26
SNCA-210ENST00000506691 A0A096LNJ9 63 aa7.18□□□□□ -1.26
SNCA-210ENST00000506691 TRAV13-1A0A0B4J241 112 aa7.18□□□□□ -1.26
SNCA-210ENST00000506691 IGKV3OR2-268A0A0C4DH90 116 aa7.18□□□□□ -1.26
SNCA-210ENST00000506691 SERF1AO75920 110 aa7.18□□□□□ -1.26
SNCA-210ENST00000506691 PMVKQ15126 192 aa7.18□□□□□ -1.26
SNCA-210ENST00000506691 KRTAP26-1Q6PEX3 210 aa7.18□□□□□ -1.26
SNCA-210ENST00000506691 FAM19A3Q7Z5A8 133 aa7.18□□□□□ -1.26
SNCA-210ENST00000506691 HSPB8Q9UJY1 196 aa7.18□□□□□ -1.26
SNCA-210ENST00000506691 MYCBP2O75592 4640 aa7.17□□□□□ -1.26
SNCA-210ENST00000506691 IGLV10-54A0A075B6I4 117 aa7.17□□□□□ -1.26
SNCA-210ENST00000506691 A0A087WTM6 91 aa7.17□□□□□ -1.26
SNCA-210ENST00000506691 LINC01561Q8N1V8 128 aa7.17□□□□□ -1.26
SNCA-210ENST00000506691 OPRPNQ99935 248 aaPredicted RBP7.17□□□□□ -1.26
SNCA-210ENST00000506691 VPS13BQ7Z7G8 4022 aa7.16□□□□□ -1.26
SNCA-210ENST00000506691 LRCOL1A6NCL2 159 aa7.16□□□□□ -1.26
SNCA-210ENST00000506691 GAGE12HA6NDE8 117 aa7.16□□□□□ -1.26
SNCA-210ENST00000506691 LEPROTL1O95214 131 aa7.16□□□□□ -1.26
SNCA-210ENST00000506691 APOMO95445 188 aa7.16□□□□□ -1.26
SNCA-210ENST00000506691 XCL1P47992 114 aa7.16□□□□□ -1.26
SNCA-210ENST00000506691 UBE2D1P51668 147 aa7.16□□□□□ -1.26
SNCA-210ENST00000506691 HERVK_113P63121 156 aa7.16□□□□□ -1.26
SNCA-210ENST00000506691 NTN5Q8WTR8 489 aaPredicted RBP7.16□□□□□ -1.26
SNCA-210ENST00000506691 IFI27L1Q96BM0 104 aa7.16□□□□□ -1.26
SNCA-210ENST00000506691 CST9LQ9H4G1 147 aa7.16□□□□□ -1.26
SNCA-210ENST00000506691 FAM229AH3BQW9 127 aa7.15□□□□□ -1.26
SNCA-210ENST00000506691 COX7A2LO14548 114 aa7.15□□□□□ -1.26
SNCA-210ENST00000506691 PRSS1P07477 247 aa7.15□□□□□ -1.26
SNCA-210ENST00000506691 LINC00310P59036 64 aa7.15□□□□□ -1.26
SNCA-210ENST00000506691 FOXI1Q12951 378 aa7.15□□□□□ -1.26
SNCA-210ENST00000506691 PMCHL1Q16048 86 aa7.15□□□□□ -1.26
SNCA-210ENST00000506691 RNASE13Q5GAN3 156 aaKnown RBP7.15□□□□□ -1.26
SNCA-210ENST00000506691 LINC00173Q6ZV60 143 aa7.15□□□□□ -1.26
SNCA-210ENST00000506691 BAALCQ8WXS3 180 aa7.15□□□□□ -1.26
SNCA-210ENST00000506691 TRAV12-1A0A0B4J245 112 aa7.14□□□□□ -1.27
SNCA-210ENST00000506691 IGHV3OR16-9A0A0B4J2B5 98 aa7.14□□□□□ -1.27
SNCA-210ENST00000506691 IGHV1-58A0A0C4DH39 117 aa7.14□□□□□ -1.27
SNCA-210ENST00000506691 TINCRA0A1B0GVN0 87 aa7.14□□□□□ -1.27
SNCA-210ENST00000506691 NDUFA6P56556 154 aa7.14□□□□□ -1.27
SNCA-210ENST00000506691 LINC00242Q5T6M2 205 aa7.14□□□□□ -1.27
SNCA-210ENST00000506691 FAM19A2Q8N3H0 131 aa7.14□□□□□ -1.27
SNCA-210ENST00000506691 Q8N814 137 aa7.14□□□□□ -1.27
SNCA-210ENST00000506691 GEMIN7Q9H840 131 aaKnown RBP7.14□□□□□ -1.27
SNCA-210ENST00000506691 A0A087WZ39 114 aa7.13□□□□□ -1.27
SNCA-210ENST00000506691 USP17L23D6RBM5 183 aa7.13□□□□□ -1.27
SNCA-210ENST00000506691 F8WDY8 70 aa7.13□□□□□ -1.27
SNCA-210ENST00000506691 NUPR1O60356 82 aa7.13□□□□□ -1.27
SNCA-210ENST00000506691 S100A6P06703 90 aa7.13□□□□□ -1.27
SNCA-210ENST00000506691 MALP21145 153 aa7.13□□□□□ -1.27
SNCA-210ENST00000506691 MAP1LC3CQ9BXW4 147 aa7.12□□□□□ -1.27
SNCA-210ENST00000506691 SRRM2Q9UQ35 2752 aaKnown RBP7.11□□□□□ -1.27
SNCA-210ENST00000506691 SERTAD4-AS1Q5TG53 156 aa7.11□□□□□ -1.27
SNCA-210ENST00000506691 OR10D4PQ8NGN7 298 aa7.11□□□□□ -1.27
SNCA-210ENST00000506691 FLG2Q5D862 2391 aaPredicted RBP7.1□□□□□ -1.27
SNCA-210ENST00000506691 IGLV5-45A0A087WSX0 123 aa7.1□□□□□ -1.27
SNCA-210ENST00000506691 GVQW2A0A096LPI5 108 aaPredicted RBP7.1□□□□□ -1.27
SNCA-210ENST00000506691 KRTAP29-1A8MX34 341 aaPredicted RBP7.1□□□□□ -1.27
SNCA-210ENST00000506691 H3BRM9 83 aa7.1□□□□□ -1.27
SNCA-210ENST00000506691 ZNF561-AS1K7EIQ3 104 aa7.1□□□□□ -1.27
SNCA-210ENST00000506691 IGLC3P0DOY3 106 aa7.1□□□□□ -1.27
SNCA-210ENST00000506691 FABP4P15090 132 aa7.1□□□□□ -1.27
SNCA-210ENST00000506691 GCSHP23434 173 aa7.1□□□□□ -1.27
SNCA-210ENST00000506691 AKR1D1P51857 326 aa7.1□□□□□ -1.27
SNCA-210ENST00000506691 ZC2HC1BQ5TFG8 222 aa7.1□□□□□ -1.27
SNCA-210ENST00000506691 C5orf38Q86SI9 138 aa7.1□□□□□ -1.27
SNCA-210ENST00000506691 CHTOPQ9Y3Y2 248 aaKnown RBP7.1□□□□□ -1.27
SNCA-210ENST00000506691 IGHV3-64A0A075B6Q5 118 aa7.09□□□□□ -1.27
SNCA-210ENST00000506691 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.09□□□□□ -1.27
SNCA-210ENST00000506691 A0A0J9YXV3 536 aa7.09□□□□□ -1.27
SNCA-210ENST00000506691 hDV102S1A0JD36 115 aa7.09□□□□□ -1.27
SNCA-210ENST00000506691 F8VRH5 84 aa7.09□□□□□ -1.27
SNCA-210ENST00000506691 J3QL48 77 aa7.09□□□□□ -1.27
SNCA-210ENST00000506691 KRTAP10-1P60331 282 aa7.09□□□□□ -1.27
SNCA-210ENST00000506691 COX6A2Q02221 97 aa7.09□□□□□ -1.27
SNCA-210ENST00000506691 C2orf48Q96LS8 159 aa7.09□□□□□ -1.27
SNCA-210ENST00000506691 PKIGQ9Y2B9 76 aa7.09□□□□□ -1.27
SNCA-210ENST00000506691 LECT2O14960 151 aa7.08□□□□□ -1.28
SNCA-210ENST00000506691 S100A2P29034 98 aa7.08□□□□□ -1.28
SNCA-210ENST00000506691 CNBPP62633 177 aaKnown RBP7.08□□□□□ -1.28
SNCA-210ENST00000506691 LINC00469Q8N7U9 141 aa7.08□□□□□ -1.28
SNCA-210ENST00000506691 C15orf56Q8N910 161 aa7.08□□□□□ -1.28
SNCA-210ENST00000506691 CDKN2A-AS1Q9UH64 79 aa7.08□□□□□ -1.28
SNCA-210ENST00000506691 IGLV5-52A0A0A0MRZ9 124 aa7.07□□□□□ -1.28
SNCA-210ENST00000506691 PLNP26678 52 aa7.07□□□□□ -1.28
SNCA-210ENST00000506691 WFDC2Q14508 124 aa7.07□□□□□ -1.28
SNCA-210ENST00000506691 PET117Q6UWS5 81 aa7.07□□□□□ -1.28
SNCA-210ENST00000506691 IGLV4-69A0A075B6H9 119 aa7.06□□□□□ -1.28
SNCA-210ENST00000506691 PLA2G1BP04054 148 aaKnown RBP7.06□□□□□ -1.28
SNCA-210ENST00000506691 PRSS2P07478 247 aa7.06□□□□□ -1.28
SNCA-210ENST00000506691 ODF1Q14990 250 aa7.06□□□□□ -1.28
SNCA-210ENST00000506691 RNF151Q2KHN1 245 aa7.06□□□□□ -1.28
SNCA-210ENST00000506691 Q8IZM0 81 aa7.06□□□□□ -1.28
SNCA-210ENST00000506691 ORAOV1Q8WV07 137 aa7.06□□□□□ -1.28
SNCA-210ENST00000506691 CHAC1Q9BUX1 264 aa7.06□□□□□ -1.28
SNCA-210ENST00000506691 SYS1-DBNDD2H3BUS1 97 aa7.05□□□□□ -1.28
SNCA-210ENST00000506691 CXCL5P42830 114 aa7.05□□□□□ -1.28
SNCA-210ENST00000506691 SPAG11BQ08648 103 aa7.05□□□□□ -1.28
SNCA-210ENST00000506691 C6orf226Q5I0X4 101 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms