RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 SLC7A5P1Q8MH63 180 aa4.76□□□□□ -1.65
GYPB-206ENST00000506516 PRSS3P2Q8NHM4 247 aa4.76□□□□□ -1.65
GYPB-206ENST00000506516 SPANXA1Q9NS26 97 aa4.76□□□□□ -1.65
GYPB-206ENST00000506516 TRAPPC1Q9Y5R8 145 aa4.76□□□□□ -1.65
GYPB-206ENST00000506516 RYR1P21817 5038 aa4.75□□□□□ -1.65
GYPB-206ENST00000506516 HERC2O95714 4834 aa4.75□□□□□ -1.65
GYPB-206ENST00000506516 TGIF2-C20orf24A0A0A6YYL0 155 aa4.75□□□□□ -1.65
GYPB-206ENST00000506516 hDV102S1A0JD36 115 aa4.75□□□□□ -1.65
GYPB-206ENST00000506516 PRSS1P07477 247 aa4.75□□□□□ -1.65
GYPB-206ENST00000506516 KRTAP10-1P60331 282 aa4.75□□□□□ -1.65
GYPB-206ENST00000506516 MRPS36P82909 103 aaKnown RBP4.75□□□□□ -1.65
GYPB-206ENST00000506516 CD164L2Q6UWJ8 174 aa4.75□□□□□ -1.65
GYPB-206ENST00000506516 ALKBH7Q9BT30 221 aaPredicted RBP4.75□□□□□ -1.65
GYPB-206ENST00000506516 CYSLTR1Q9Y271 337 aa4.75□□□□□ -1.65
GYPB-206ENST00000506516 PYGO1Q9Y3Y4 419 aa4.75□□□□□ -1.65
GYPB-206ENST00000506516 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.74□□□□□ -1.65
GYPB-206ENST00000506516 TRAV13-1A0A0B4J241 112 aa4.74□□□□□ -1.65
GYPB-206ENST00000506516 LINC01549A6NIU2 74 aa4.74□□□□□ -1.65
GYPB-206ENST00000506516 FOXI1Q12951 378 aa4.74□□□□□ -1.65
GYPB-206ENST00000506516 RNASE13Q5GAN3 156 aaKnown RBP4.74□□□□□ -1.65
GYPB-206ENST00000506516 C2orf66Q6UXQ4 117 aa4.74□□□□□ -1.65
GYPB-206ENST00000506516 Q6ZN92 141 aa4.74□□□□□ -1.65
GYPB-206ENST00000506516 Q6ZUT4 128 aa4.74□□□□□ -1.65
GYPB-206ENST00000506516 SMCO4Q9NRQ5 59 aa4.74□□□□□ -1.65
GYPB-206ENST00000506516 APOBP04114 4563 aaKnown RBP4.73□□□□□ -1.65
GYPB-206ENST00000506516 IGHV1-58A0A0C4DH39 117 aa4.73□□□□□ -1.65
GYPB-206ENST00000506516 NPSP0C0P6 89 aa4.73□□□□□ -1.65
GYPB-206ENST00000506516 PAPPA-AS1Q5QFB9 102 aa4.73□□□□□ -1.65
GYPB-206ENST00000506516 TEX43Q6ZNM6 134 aa4.73□□□□□ -1.65
GYPB-206ENST00000506516 FA2HQ7L5A8 372 aa4.73□□□□□ -1.65
GYPB-206ENST00000506516 C9orf163Q8N9P6 203 aa4.73□□□□□ -1.65
GYPB-206ENST00000506516 TMEM141Q96I45 108 aa4.73□□□□□ -1.65
GYPB-206ENST00000506516 C2orf88Q9BSF0 95 aa4.73□□□□□ -1.65
GYPB-206ENST00000506516 KRTAP4-5Q9BYR2 181 aa4.73□□□□□ -1.65
GYPB-206ENST00000506516 VCX2Q9H322 139 aa4.73□□□□□ -1.65
GYPB-206ENST00000506516 IGLV4-3A0A075B6K6 122 aa4.72□□□□□ -1.65
GYPB-206ENST00000506516 IFITM10A6NMD0 228 aa4.72□□□□□ -1.65
GYPB-206ENST00000506516 COX7A2LO14548 114 aa4.72□□□□□ -1.65
GYPB-206ENST00000506516 APOMO95445 188 aa4.72□□□□□ -1.65
GYPB-206ENST00000506516 XGP55808 180 aa4.72□□□□□ -1.65
GYPB-206ENST00000506516 RAB5BP61020 215 aa4.72□□□□□ -1.65
GYPB-206ENST00000506516 CNBPP62633 177 aaKnown RBP4.72□□□□□ -1.65
GYPB-206ENST00000506516 OPRPNQ99935 248 aaPredicted RBP4.72□□□□□ -1.65
GYPB-206ENST00000506516 IGHV3-64A0A075B6Q5 118 aa4.71□□□□□ -1.66
GYPB-206ENST00000506516 LINC01546A6NGU7 62 aa4.71□□□□□ -1.66
GYPB-206ENST00000506516 IGIPA6NJ69 53 aa4.71□□□□□ -1.66
GYPB-206ENST00000506516 LINC00614P0C842 121 aa4.71□□□□□ -1.66
GYPB-206ENST00000506516 LINC01620Q4KN68 170 aa4.71□□□□□ -1.66
GYPB-206ENST00000506516 HIGD2BQ4VC39 106 aa4.71□□□□□ -1.66
GYPB-206ENST00000506516 C15orf56Q8N910 161 aa4.71□□□□□ -1.66
GYPB-206ENST00000506516 TOMM6Q96B49 74 aa4.71□□□□□ -1.66
GYPB-206ENST00000506516 SCGB3A1Q96QR1 104 aa4.71□□□□□ -1.66
GYPB-206ENST00000506516 TIMM17AQ99595 171 aa4.71□□□□□ -1.66
GYPB-206ENST00000506516 DNAH8Q96JB1 4490 aa4.71□□□□□ -1.66
GYPB-206ENST00000506516 HSPG2P98160 4391 aa4.7□□□□□ -1.66
GYPB-206ENST00000506516 GVQW2A0A096LPI5 108 aaPredicted RBP4.7□□□□□ -1.66
GYPB-206ENST00000506516 SEC11AP67812 179 aa4.7□□□□□ -1.66
GYPB-206ENST00000506516 ERASQ7Z444 233 aa4.7□□□□□ -1.66
GYPB-206ENST00000506516 C5orf38Q86SI9 138 aa4.7□□□□□ -1.66
GYPB-206ENST00000506516 Q8N1X5 172 aa4.7□□□□□ -1.66
GYPB-206ENST00000506516 FAM104AQ969W3 186 aa4.7□□□□□ -1.66
GYPB-206ENST00000506516 DPH3Q96FX2 82 aa4.7□□□□□ -1.66
GYPB-206ENST00000506516 YPEL4Q96NS1 127 aa4.7□□□□□ -1.66
GYPB-206ENST00000506516 AMELXQ99217 191 aa4.7□□□□□ -1.66
GYPB-206ENST00000506516 IGHV3OR16-9A0A0B4J2B5 98 aa4.69□□□□□ -1.66
GYPB-206ENST00000506516 SLPIP03973 132 aa4.69□□□□□ -1.66
GYPB-206ENST00000506516 UBE2D1P51668 147 aa4.69□□□□□ -1.66
GYPB-206ENST00000506516 LINC00242Q5T6M2 205 aa4.69□□□□□ -1.66
GYPB-206ENST00000506516 Q6ZSA8 131 aa4.69□□□□□ -1.66
GYPB-206ENST00000506516 CBLN2Q8IUK8 224 aa4.69□□□□□ -1.66
GYPB-206ENST00000506516 C18orf32Q8TCD1 76 aa4.69□□□□□ -1.66
GYPB-206ENST00000506516 PKIGQ9Y2B9 76 aa4.69□□□□□ -1.66
GYPB-206ENST00000506516 IGLV4-69A0A075B6H9 119 aa4.68□□□□□ -1.66
GYPB-206ENST00000506516 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.68□□□□□ -1.66
GYPB-206ENST00000506516 SYCNQ0VAF6 134 aa4.68□□□□□ -1.66
GYPB-206ENST00000506516 SDIM1Q6ZPB5 146 aa4.68□□□□□ -1.66
GYPB-206ENST00000506516 OR10D4PQ8NGN7 298 aa4.68□□□□□ -1.66
GYPB-206ENST00000506516 C2orf48Q96LS8 159 aa4.68□□□□□ -1.66
GYPB-206ENST00000506516 CHAC1Q9BUX1 264 aa4.68□□□□□ -1.66
GYPB-206ENST00000506516 A0A087WZ39 114 aa4.67□□□□□ -1.66
GYPB-206ENST00000506516 EPM2AB3EWF7 344 aa4.67□□□□□ -1.66
GYPB-206ENST00000506516 F8WDY8 70 aa4.67□□□□□ -1.66
GYPB-206ENST00000506516 HBDP02042 147 aa4.67□□□□□ -1.66
GYPB-206ENST00000506516 SMR3BP02814 79 aaPredicted RBP4.67□□□□□ -1.66
GYPB-206ENST00000506516 HERVK_113P63121 156 aa4.67□□□□□ -1.66
GYPB-206ENST00000506516 HAMPP81172 84 aa4.67□□□□□ -1.66
GYPB-206ENST00000506516 COX6A2Q02221 97 aa4.67□□□□□ -1.66
GYPB-206ENST00000506516 SPAG11BQ08648 103 aa4.67□□□□□ -1.66
GYPB-206ENST00000506516 PMVKQ15126 192 aa4.67□□□□□ -1.66
GYPB-206ENST00000506516 ZC2HC1BQ5TFG8 222 aa4.67□□□□□ -1.66
GYPB-206ENST00000506516 FAM19A3Q7Z5A8 133 aa4.67□□□□□ -1.66
GYPB-206ENST00000506516 LINC01561Q8N1V8 128 aa4.67□□□□□ -1.66
GYPB-206ENST00000506516 ORAOV1Q8WV07 137 aa4.67□□□□□ -1.66
GYPB-206ENST00000506516 CHCHD1Q96BP2 118 aaKnown RBP4.67□□□□□ -1.66
GYPB-206ENST00000506516 LINC00526Q96FQ7 95 aa4.67□□□□□ -1.66
GYPB-206ENST00000506516 CARD19Q96LW7 228 aa4.67□□□□□ -1.66
GYPB-206ENST00000506516 CAMK2N2Q96S95 79 aa4.67□□□□□ -1.66
GYPB-206ENST00000506516 GEMIN7Q9H840 131 aaKnown RBP4.67□□□□□ -1.66
GYPB-206ENST00000506516 COLCA2A8K830 154 aa4.66□□□□□ -1.66
GYPB-206ENST00000506516 TRGC2P03986 189 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms