RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 H0Y9P7 68 aa1.49□□□□□ -2.17
HMGB1P22-201ENST00000505315 KRTAP6-3Q3LI67 103 aa1.49□□□□□ -2.17
HMGB1P22-201ENST00000505315 Q6ZSA8 131 aa1.49□□□□□ -2.17
HMGB1P22-201ENST00000505315 C18orf32Q8TCD1 76 aa1.49□□□□□ -2.17
HMGB1P22-201ENST00000505315 COL4A4P53420 1690 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P22-201ENST00000505315 COL4A6Q14031 1691 aa1.48□□□□□ -2.17
HMGB1P22-201ENST00000505315 PLXNA1Q9UIW2 1896 aa1.48□□□□□ -2.17
HMGB1P22-201ENST00000505315 DOCK11Q5JSL3 2073 aa1.48□□□□□ -2.17
HMGB1P22-201ENST00000505315 A0A087WXM4 84 aa1.48□□□□□ -2.17
HMGB1P22-201ENST00000505315 ANGP03950 147 aaKnown RBP1.48□□□□□ -2.17
HMGB1P22-201ENST00000505315 S100A3P33764 101 aa1.48□□□□□ -2.17
HMGB1P22-201ENST00000505315 C10orf113Q5VZT2 155 aa1.48□□□□□ -2.17
HMGB1P22-201ENST00000505315 KRTAP13-1Q8IUC0 172 aa1.48□□□□□ -2.17
HMGB1P22-201ENST00000505315 UBE2DNLQ8IWF7 75 aa1.48□□□□□ -2.17
HMGB1P22-201ENST00000505315 LINC00846Q9NV44 126 aa1.48□□□□□ -2.17
HMGB1P22-201ENST00000505315 LOC285556D6RIA3 1793 aa1.48□□□□□ -2.17
HMGB1P22-201ENST00000505315 PPLO60437 1756 aa1.48□□□□□ -2.17
HMGB1P22-201ENST00000505315 ASCC3Q8N3C0 2202 aaKnown RBP1.48□□□□□ -2.17
HMGB1P22-201ENST00000505315 IFT172Q9UG01 1749 aa1.48□□□□□ -2.17
HMGB1P22-201ENST00000505315 DLG5Q8TDM6 1919 aa1.48□□□□□ -2.17
HMGB1P22-201ENST00000505315 DIP2BQ9P265 1576 aa1.47□□□□□ -2.17
HMGB1P22-201ENST00000505315 TRBV6-1A0A0K0K1D8 114 aa1.47□□□□□ -2.17
HMGB1P22-201ENST00000505315 PIN1P1O15428 100 aa1.47□□□□□ -2.17
HMGB1P22-201ENST00000505315 PRB1P04280 392 aa1.47□□□□□ -2.17
HMGB1P22-201ENST00000505315 LINC01600Q96MT4 127 aa1.47□□□□□ -2.17
HMGB1P22-201ENST00000505315 CCDC141Q6ZP82 1450 aa1.47□□□□□ -2.17
HMGB1P22-201ENST00000505315 SCN7AQ01118 1682 aa1.47□□□□□ -2.17
HMGB1P22-201ENST00000505315 ABCC1P33527 1531 aa1.46□□□□□ -2.18
HMGB1P22-201ENST00000505315 KRTAP9-6A8MVA2 160 aa1.46□□□□□ -2.18
HMGB1P22-201ENST00000505315 G3V318 75 aa1.46□□□□□ -2.18
HMGB1P22-201ENST00000505315 KRTAP12-3P60328 96 aa1.46□□□□□ -2.18
HMGB1P22-201ENST00000505315 SPRR4Q96PI1 79 aa1.46□□□□□ -2.18
HMGB1P22-201ENST00000505315 LINC00472Q9H8W2 130 aa1.46□□□□□ -2.18
HMGB1P22-201ENST00000505315 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.45□□□□□ -2.18
HMGB1P22-201ENST00000505315 SIPA1L3O60292 1781 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P22-201ENST00000505315 A0A1B0GUT8 65 aa1.45□□□□□ -2.18
HMGB1P22-201ENST00000505315 SSBP3-AS1Q7Z2R9 100 aa1.45□□□□□ -2.18
HMGB1P22-201ENST00000505315 UBE2D4Q9Y2X8 147 aa1.45□□□□□ -2.18
HMGB1P22-201ENST00000505315 CLIP1P30622 1438 aa1.45□□□□□ -2.18
HMGB1P22-201ENST00000505315 ERICH3Q5RHP9 1530 aa1.45□□□□□ -2.18
HMGB1P22-201ENST00000505315 KCPQ6ZWJ8 1503 aa1.45□□□□□ -2.18
HMGB1P22-201ENST00000505315 TECTAO75443 2155 aa1.44□□□□□ -2.18
HMGB1P22-201ENST00000505315 DNMBPQ6XZF7 1577 aa1.44□□□□□ -2.18
HMGB1P22-201ENST00000505315 A0A1B0GU69 56 aa1.44□□□□□ -2.18
HMGB1P22-201ENST00000505315 UMAD1C9J7I0 102 aa1.44□□□□□ -2.18
HMGB1P22-201ENST00000505315 PROK2Q9HC23 129 aa1.44□□□□□ -2.18
HMGB1P22-201ENST00000505315 ZNF236Q9UL36 1845 aa1.44□□□□□ -2.18
HMGB1P22-201ENST00000505315 CCDC88BA6NC98 1476 aa1.43□□□□□ -2.18
HMGB1P22-201ENST00000505315 PDCD11Q14690 1871 aaKnown RBP1.43□□□□□ -2.18
HMGB1P22-201ENST00000505315 ABCA1O95477 2261 aa1.43□□□□□ -2.18
HMGB1P22-201ENST00000505315 BTAF1O14981 1849 aa1.43□□□□□ -2.18
HMGB1P22-201ENST00000505315 CUX1P39880 1505 aa1.43□□□□□ -2.18
HMGB1P22-201ENST00000505315 C1orf167Q5SNV9 1468 aa1.43□□□□□ -2.18
HMGB1P22-201ENST00000505315 UGGT2Q9NYU1 1516 aa1.42□□□□□ -2.18
HMGB1P22-201ENST00000505315 MED13LQ71F56 2210 aa1.42□□□□□ -2.18
HMGB1P22-201ENST00000505315 RAPGEF6Q8TEU7 1601 aa1.42□□□□□ -2.18
HMGB1P22-201ENST00000505315 SPINK7P58062 85 aa1.42□□□□□ -2.18
HMGB1P22-201ENST00000505315 ATP5EP2Q5VTU8 51 aa1.42□□□□□ -2.18
HMGB1P22-201ENST00000505315 KNDC1Q76NI1 1749 aa1.41□□□□□ -2.18
HMGB1P22-201ENST00000505315 H3BVH4 76 aa1.41□□□□□ -2.18
HMGB1P22-201ENST00000505315 DEFB112Q30KQ8 113 aa1.41□□□□□ -2.18
HMGB1P22-201ENST00000505315 Q5BKY6 102 aa1.41□□□□□ -2.18
HMGB1P22-201ENST00000505315 SPATA8Q6RVD6 105 aa1.41□□□□□ -2.18
HMGB1P22-201ENST00000505315 SSC5DA1L4H1 1573 aa1.41□□□□□ -2.18
HMGB1P22-201ENST00000505315 NCOA6Q14686 2063 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P22-201ENST00000505315 LRRC37A2A6NM11 1700 aa1.4□□□□□ -2.18
HMGB1P22-201ENST00000505315 ERCC6L2Q5T890 1561 aa1.4□□□□□ -2.19
HMGB1P22-201ENST00000505315 NCOA2Q15596 1464 aa1.4□□□□□ -2.19
HMGB1P22-201ENST00000505315 K7EIL1 84 aa1.4□□□□□ -2.19
HMGB1P22-201ENST00000505315 SPINK9Q5DT21 86 aa1.4□□□□□ -2.19
HMGB1P22-201ENST00000505315 HEPN1Q6WQI6 88 aa1.4□□□□□ -2.19
HMGB1P22-201ENST00000505315 WFDC9Q8NEX5 89 aa1.4□□□□□ -2.19
HMGB1P22-201ENST00000505315 F5P12259 2224 aa1.4□□□□□ -2.19
HMGB1P22-201ENST00000505315 DUOX2Q9NRD8 1548 aa1.4□□□□□ -2.19
HMGB1P22-201ENST00000505315 CFAP74Q9C0B2 1584 aa1.39□□□□□ -2.19
HMGB1P22-201ENST00000505315 IFI27P40305 119 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P22-201ENST00000505315 DEFB121Q5J5C9 76 aa1.39□□□□□ -2.19
HMGB1P22-201ENST00000505315 LRRC9Q6ZRR7 1453 aa1.38□□□□□ -2.19
HMGB1P22-201ENST00000505315 UBR1Q8IWV7 1749 aa1.38□□□□□ -2.19
HMGB1P22-201ENST00000505315 LRRIQ1Q96JM4 1722 aa1.38□□□□□ -2.19
HMGB1P22-201ENST00000505315 MYO7AQ13402 2215 aa1.38□□□□□ -2.19
HMGB1P22-201ENST00000505315 NDUFB1O75438 58 aa1.38□□□□□ -2.19
HMGB1P22-201ENST00000505315 KRTAP12-4P60329 112 aa1.38□□□□□ -2.19
HMGB1P22-201ENST00000505315 GAFA1Q96PS6 74 aa1.38□□□□□ -2.19
HMGB1P22-201ENST00000505315 GNG13Q9P2W3 67 aa1.38□□□□□ -2.19
HMGB1P22-201ENST00000505315 S100ZQ8WXG8 99 aa1.37□□□□□ -2.19
HMGB1P22-201ENST00000505315 LAMA4Q16363 1823 aa1.37□□□□□ -2.19
HMGB1P22-201ENST00000505315 MYO7BQ6PIF6 2116 aa1.37□□□□□ -2.19
HMGB1P22-201ENST00000505315 NUP188Q5SRE5 1749 aa1.37□□□□□ -2.19
HMGB1P22-201ENST00000505315 HIVEP2P31629 2446 aa1.37□□□□□ -2.19
HMGB1P22-201ENST00000505315 ATP7BP35670 1465 aa1.37□□□□□ -2.19
HMGB1P22-201ENST00000505315 TRAV21A0A0B4J279 112 aa1.36□□□□□ -2.19
HMGB1P22-201ENST00000505315 ADAMTS12P58397 1594 aa1.36□□□□□ -2.19
HMGB1P22-201ENST00000505315 PLAC8Q9NZF1 115 aa1.36□□□□□ -2.19
HMGB1P22-201ENST00000505315 HILPDAQ9Y5L2 63 aa1.36□□□□□ -2.19
HMGB1P22-201ENST00000505315 FLG2Q5D862 2391 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P22-201ENST00000505315 MYH4Q9Y623 1939 aa1.36□□□□□ -2.19
HMGB1P22-201ENST00000505315 URB2Q14146 1524 aaKnown RBP1.35□□□□□ -2.19
HMGB1P22-201ENST00000505315 ABCA8O94911 1581 aa1.35□□□□□ -2.19
HMGB1P22-201ENST00000505315 A0A0D9SFI3 127 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms