RNA–Protein interactions for RNA: ENST00000505108.1

TRAPPC13-207, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-207ENST00000505108 CEP250Q9BV73 2442 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 MED13LQ71F56 2210 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 DMXL1Q9Y485 3027 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 DSPP15924 2871 aaKnown RBP2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 MGAQ8IWI9 3026 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 KNCNA6PVL3 124 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 ZNF815PA8K554 130 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 J3QLI3 93 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 K7ERU9 68 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 PPP1R17O96001 155 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 IGHV3-30P01768 117 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 PRB1P04280 392 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 PRM2P04554 102 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 IGHV3-30-5P0DP03 117 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 UBE2D3P61077 147 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 UBE2D2P62837 147 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 RHOHQ15669 191 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 FAM74A4Q5TZK3 123 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 TMEM141Q96I45 108 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 VPS25Q9BRG1 176 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 VPREB3Q9UKI3 123 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 HRNRQ86YZ3 2850 aaPredicted RBP2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 DCHS1Q96JQ0 3298 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 HIVEP3Q5T1R4 2406 aa2.91□□□□□ -1.94
TRAPPC13-207ENST00000505108 LINC01549A6NIU2 74 aa2.9□□□□□ -1.95
TRAPPC13-207ENST00000505108 H3BMG7 143 aa2.9□□□□□ -1.95
TRAPPC13-207ENST00000505108 ZNF22P17026 224 aaPredicted RBP2.9□□□□□ -1.95
TRAPPC13-207ENST00000505108 ZNF56Q15929 161 aa2.9□□□□□ -1.95
TRAPPC13-207ENST00000505108 DEFB136Q30KP8 78 aa2.9□□□□□ -1.95
TRAPPC13-207ENST00000505108 SAMD13Q5VXD3 122 aa2.9□□□□□ -1.95
TRAPPC13-207ENST00000505108 Q8N2B8 174 aa2.9□□□□□ -1.95
TRAPPC13-207ENST00000505108 ST20-AS1Q8NBB2 130 aa2.9□□□□□ -1.95
TRAPPC13-207ENST00000505108 UBE2E2Q96LR5 201 aa2.9□□□□□ -1.95
TRAPPC13-207ENST00000505108 CACNA1AO00555 2505 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 BDP1A6H8Y1 2624 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 F8W1H4 67 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 H3BMM0 161 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 J3QQQ9 107 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 LEPROTO15243 131 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 TCL1BO95988 128 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 INSL3P51460 131 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 DEFB131AP59861 70 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 CFAP126Q5VTH2 177 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 NDUFA11Q86Y39 141 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 SBSPONQ8IVN8 264 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 C10orf126Q8N4M7 172 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 SLC25A29Q8N8R3 303 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 SPANXA2-OT1Q8N9U9 137 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 PTH2Q96A98 100 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 CARD19Q96LW7 228 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 CHCHD7Q9BUK0 85 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 SPTBN2O15020 2390 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 DMXL2Q8TDJ6 3036 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 COL6A6A6NMZ7 2263 aa2.89□□□□□ -1.95
TRAPPC13-207ENST00000505108 MUC6Q6W4X9 2439 aa2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 IGHV3-64A0A075B6Q5 118 aa2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 IGHV3-73A0A0B4J1V6 119 aa2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 TRAV2A0A0B4J234 112 aa2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 IGHV3OR16-9A0A0B4J2B5 98 aa2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 I3L3M4 83 aa2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 M0R2P5 195 aa2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 APOMO95445 188 aa2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 IGHV3-33P01772 117 aa2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 CD28P10747 220 aa2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 SNRPD3P62318 126 aaKnown RBP2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 MRPS36P82909 103 aaKnown RBP2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 ETDBQ3ZM63 59 aa2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 TMEM170BQ5T4T1 132 aa2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 SCGB1D4Q6XE38 83 aa2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 TMEM263Q8WUH6 116 aaKnown RBP2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 LINC00467Q9BRT7 94 aa2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 PTPRZ1P23471 2315 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 SPTBN1Q01082 2364 aaKnown RBP2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 GVINP1Q7Z2Y8 2422 aa2.88□□□□□ -1.95
TRAPPC13-207ENST00000505108 DCHS2Q6V1P9 2916 aa2.87□□□□□ -1.95
TRAPPC13-207ENST00000505108 TRAV8-3A0A0A6YYJ7 113 aa2.87□□□□□ -1.95
TRAPPC13-207ENST00000505108 TMEM238C9JI98 176 aa2.87□□□□□ -1.95
TRAPPC13-207ENST00000505108 LGALS3P17931 250 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-207ENST00000505108 PFN2P35080 140 aa2.87□□□□□ -1.95
TRAPPC13-207ENST00000505108 DEFB114Q30KQ6 69 aa2.87□□□□□ -1.95
TRAPPC13-207ENST00000505108 SFTA2Q6UW10 78 aa2.87□□□□□ -1.95
TRAPPC13-207ENST00000505108 Q6ZUT4 128 aa2.87□□□□□ -1.95
TRAPPC13-207ENST00000505108 C1orf158Q8N1D5 194 aa2.87□□□□□ -1.95
TRAPPC13-207ENST00000505108 ATP6V0E2Q8NHE4 81 aa2.87□□□□□ -1.95
TRAPPC13-207ENST00000505108 C4orf3Q8WVX3 66 aa2.87□□□□□ -1.95
TRAPPC13-207ENST00000505108 MRPL16Q9NX20 251 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-207ENST00000505108 UBE2D4Q9Y2X8 147 aa2.87□□□□□ -1.95
TRAPPC13-207ENST00000505108 ZNF292O60281 2723 aa2.87□□□□□ -1.95
TRAPPC13-207ENST00000505108 ANKHD1Q8IWZ3 2542 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-207ENST00000505108 NBEAQ8NFP9 2946 aa2.86□□□□□ -1.95
TRAPPC13-207ENST00000505108 ATMQ13315 3056 aa2.86□□□□□ -1.95
TRAPPC13-207ENST00000505108 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC13-207ENST00000505108 A0A0B4J2C4 111 aa2.86□□□□□ -1.95
TRAPPC13-207ENST00000505108 IGKV2-29A2NJV5 120 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC13-207ENST00000505108 A8MWV9 139 aa2.86□□□□□ -1.95
TRAPPC13-207ENST00000505108 IGHV3-53P01767 116 aa2.86□□□□□ -1.95
TRAPPC13-207ENST00000505108 IGHV3-30-3P0DP02 117 aa2.86□□□□□ -1.95
TRAPPC13-207ENST00000505108 PSMB2P49721 201 aa2.86□□□□□ -1.95
TRAPPC13-207ENST00000505108 CRYBA4P53673 196 aa2.86□□□□□ -1.95
TRAPPC13-207ENST00000505108 DEFB113Q30KQ7 82 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms