RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 MED12LQ86YW9 2145 aa1.59□□□□□ -2.15
TRAPPC13-205ENST00000504243 HEATR1Q9H583 2144 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-205ENST00000504243 R4GMQ9 66 aa1.59□□□□□ -2.15
TRAPPC13-205ENST00000504243 MYO5CQ9NQX4 1742 aa1.59□□□□□ -2.16
TRAPPC13-205ENST00000504243 LMTK2Q8IWU2 1503 aa1.59□□□□□ -2.16
TRAPPC13-205ENST00000504243 KIAA0100Q14667 2235 aaKnown RBP1.59□□□□□ -2.16
TRAPPC13-205ENST00000504243 CFAP47Q6ZTR5 3102 aa1.59□□□□□ -2.16
TRAPPC13-205ENST00000504243 BPTFQ12830 3046 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 ZGRF1Q86YA3 2104 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 GCN1Q92616 2671 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 FANCD2Q9BXW9 1451 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 LOC101927531A0A1B0GV80 90 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 FXYD1O00168 92 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 LEPROTL1O95214 131 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 PPP1R17O96001 155 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 COX8AP10176 69 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 CSAG1Q6PB30 78 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 FAM223AQ8IWN6 122 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 C20orf197Q8N268 126 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 PATE1Q8WXA2 126 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 CDC42SE2Q9NRR3 84 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 TMEM14BQ9NUH8 114 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 KLK9Q9UKQ9 250 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 DOCK11Q5JSL3 2073 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 DOCK2Q92608 1830 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 IQGAP3Q86VI3 1631 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 RP1P56715 2156 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 SPAG17Q6Q759 2223 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 TET3O43151 1660 aa1.58□□□□□ -2.16
TRAPPC13-205ENST00000504243 EYSQ5T1H1 3165 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 NKTRP30414 1462 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 ASH1LQ9NR48 2969 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 ZNF292O60281 2723 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 TNRC6BQ9UPQ9 1833 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 INTS1Q8N201 2190 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 TRBV6-7A0A0A0MS04 114 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 IQCF6A8MYZ5 107 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 D6R8Y8 96 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 F8WEM9 126 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 JMJD7-PLA2G4BH0Y9G9 81 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 HMGN4O00479 90 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 HCRTO43612 131 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 SPAG11BQ08648 103 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 Q5VV11 94 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 SPAG11AQ6PDA7 123 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 SFTA2Q6UW10 78 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 MUSTN1Q8IVN3 82 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 NDUFA4L2Q9NRX3 87 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 GNG13Q9P2W3 67 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 DLG5Q8TDM6 1919 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 SETD2Q9BYW2 2564 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 SHROOM2Q13796 1616 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 ABCA9Q8IUA7 1624 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 UNC80Q8N2C7 3258 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 PI4KAP42356 2102 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 RGPD2P0DJD1 1756 aa1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 GOLGB1Q14789 3259 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-205ENST00000504243 KIAA1109Q2LD37 5005 aa1.56□□□□□ -2.16
TRAPPC13-205ENST00000504243 DIP2CQ9Y2E4 1556 aa1.56□□□□□ -2.16
TRAPPC13-205ENST00000504243 NAV3Q8IVL0 2385 aa1.56□□□□□ -2.16
TRAPPC13-205ENST00000504243 TRBV6-4A0A1B0GX49 114 aa1.56□□□□□ -2.16
TRAPPC13-205ENST00000504243 PPYP01298 95 aa1.56□□□□□ -2.16
TRAPPC13-205ENST00000504243 TFF1P04155 84 aa1.56□□□□□ -2.16
TRAPPC13-205ENST00000504243 PDE6GP18545 87 aa1.56□□□□□ -2.16
TRAPPC13-205ENST00000504243 GCHFRP30047 84 aa1.56□□□□□ -2.16
TRAPPC13-205ENST00000504243 IFI27P40305 119 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-205ENST00000504243 Q6JHZ5 121 aa1.56□□□□□ -2.16
TRAPPC13-205ENST00000504243 BPESC1Q9GZL8 116 aa1.56□□□□□ -2.16
TRAPPC13-205ENST00000504243 TMEM14CQ9P0S9 112 aa1.56□□□□□ -2.16
TRAPPC13-205ENST00000504243 ARL2-SNX15V9GYD0 113 aa1.56□□□□□ -2.16
TRAPPC13-205ENST00000504243 AFDNP55196 1824 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-205ENST00000504243 DNHD1Q96M86 4753 aa1.56□□□□□ -2.16
TRAPPC13-205ENST00000504243 KALRNO60229 2985 aa1.56□□□□□ -2.16
TRAPPC13-205ENST00000504243 LRRC37A3O60309 1634 aa1.55□□□□□ -2.16
TRAPPC13-205ENST00000504243 TOP2BQ02880 1626 aa1.55□□□□□ -2.16
TRAPPC13-205ENST00000504243 MUC22E2RYF6 1773 aaPredicted RBP1.55□□□□□ -2.16
TRAPPC13-205ENST00000504243 JMJD1CQ15652 2540 aa1.55□□□□□ -2.16
TRAPPC13-205ENST00000504243 ARMS2P0C7Q2 107 aa1.55□□□□□ -2.16
TRAPPC13-205ENST00000504243 BAGE3Q86Y29 109 aa1.55□□□□□ -2.16
TRAPPC13-205ENST00000504243 BAGE2Q86Y30 109 aa1.55□□□□□ -2.16
TRAPPC13-205ENST00000504243 COX7B2Q8TF08 81 aa1.55□□□□□ -2.16
TRAPPC13-205ENST00000504243 NEXMIFQ5QGS0 1516 aa1.55□□□□□ -2.16
TRAPPC13-205ENST00000504243 SYCP2Q9BX26 1530 aa1.55□□□□□ -2.16
TRAPPC13-205ENST00000504243 PLXNC1O60486 1568 aa1.55□□□□□ -2.16
TRAPPC13-205ENST00000504243 MADDQ8WXG6 1647 aa1.55□□□□□ -2.16
TRAPPC13-205ENST00000504243 ZNF142P52746 1687 aaPredicted RBP1.55□□□□□ -2.16
TRAPPC13-205ENST00000504243 RGPD1P0DJD0 1748 aa1.54□□□□□ -2.16
TRAPPC13-205ENST00000504243 ARFGEF3Q5TH69 2177 aa1.54□□□□□ -2.16
TRAPPC13-205ENST00000504243 F8VRH5 84 aa1.54□□□□□ -2.16
TRAPPC13-205ENST00000504243 CCL3L1P16619 93 aa1.54□□□□□ -2.16
TRAPPC13-205ENST00000504243 PSENENQ9NZ42 101 aa1.54□□□□□ -2.16
TRAPPC13-205ENST00000504243 V9GYV3 84 aa1.54□□□□□ -2.16
TRAPPC13-205ENST00000504243 HELZ2Q9BYK8 2649 aaKnown RBP1.54□□□□□ -2.16
TRAPPC13-205ENST00000504243 HMGXB3Q12766 1538 aa1.54□□□□□ -2.16
TRAPPC13-205ENST00000504243 TARBP1Q13395 1621 aaKnown RBP1.54□□□□□ -2.16
TRAPPC13-205ENST00000504243 RYR1P21817 5038 aa1.54□□□□□ -2.16
TRAPPC13-205ENST00000504243 ITSN1Q15811 1721 aa1.54□□□□□ -2.16
TRAPPC13-205ENST00000504243 FAM223BA6NKX1 122 aa1.53□□□□□ -2.16
TRAPPC13-205ENST00000504243 SNRPGP15A8MWD9 76 aa1.53□□□□□ -2.16
TRAPPC13-205ENST00000504243 H3BVH4 76 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms