RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 IGLV1-51P01701 117 aa5.18□□□□□ -1.58
SYNPO2-205ENST00000504178 ATP5EP56381 51 aaPredicted RBP5.18□□□□□ -1.58
SYNPO2-205ENST00000504178 DOCK10Q96BY6 2186 aa5.18□□□□□ -1.58
SYNPO2-205ENST00000504178 SERP1Q9Y6X1 66 aa5.18□□□□□ -1.58
SYNPO2-205ENST00000504178 CRIP2P52943 208 aaPredicted RBP5.18□□□□□ -1.58
SYNPO2-205ENST00000504178 CHCHD7Q9BUK0 85 aa5.18□□□□□ -1.58
SYNPO2-205ENST00000504178 COX6A2Q02221 97 aa5.18□□□□□ -1.58
SYNPO2-205ENST00000504178 POM121L12Q8N7R1 296 aa5.18□□□□□ -1.58
SYNPO2-205ENST00000504178 C6orf223Q8N319 242 aa5.18□□□□□ -1.58
SYNPO2-205ENST00000504178 ATG2AQ2TAZ0 1938 aa5.17□□□□□ -1.58
SYNPO2-205ENST00000504178 RIF1Q5UIP0 2472 aaKnown RBP5.17□□□□□ -1.58
SYNPO2-205ENST00000504178 UNQ6190/PRO20217Q6UXQ8 127 aa5.17□□□□□ -1.58
SYNPO2-205ENST00000504178 C2orf91Q6ZV80 131 aa5.17□□□□□ -1.58
SYNPO2-205ENST00000504178 V9GYY9 64 aa5.17□□□□□ -1.58
SYNPO2-205ENST00000504178 LAMA3Q16787 3333 aa5.17□□□□□ -1.58
SYNPO2-205ENST00000504178 COL5A1P20908 1838 aaPredicted RBP5.17□□□□□ -1.58
SYNPO2-205ENST00000504178 FHL2Q14192 279 aa5.17□□□□□ -1.58
SYNPO2-205ENST00000504178 NCOA6Q14686 2063 aaPredicted RBP5.17□□□□□ -1.58
SYNPO2-205ENST00000504178 C9orf116Q5BN46 136 aaPredicted RBP5.17□□□□□ -1.58
SYNPO2-205ENST00000504178 FAM19A3Q7Z5A8 133 aa5.17□□□□□ -1.58
SYNPO2-205ENST00000504178 EGFEM1PQ0D2K5 195 aa5.17□□□□□ -1.58
SYNPO2-205ENST00000504178 Q6ZTC4 211 aa5.17□□□□□ -1.58
SYNPO2-205ENST00000504178 ACACAQ13085 2346 aa5.17□□□□□ -1.58
SYNPO2-205ENST00000504178 RAI1Q7Z5J4 1906 aaPredicted RBP5.17□□□□□ -1.58
SYNPO2-205ENST00000504178 ESRGQ1W209 222 aa5.17□□□□□ -1.58
SYNPO2-205ENST00000504178 PTPRSQ13332 1948 aa5.16□□□□□ -1.58
SYNPO2-205ENST00000504178 FAM240AA0A1B0GVK7 77 aa5.16□□□□□ -1.58
SYNPO2-205ENST00000504178 Q8N9L7 120 aa5.16□□□□□ -1.58
SYNPO2-205ENST00000504178 ADAMTS20P59510 1910 aa5.16□□□□□ -1.58
SYNPO2-205ENST00000504178 IGIPA6NJ69 53 aa5.16□□□□□ -1.58
SYNPO2-205ENST00000504178 NDUFC1O43677 76 aa5.16□□□□□ -1.58
SYNPO2-205ENST00000504178 GVINP1Q7Z2Y8 2422 aa5.16□□□□□ -1.58
SYNPO2-205ENST00000504178 LINC00242Q5T6M2 205 aa5.16□□□□□ -1.58
SYNPO2-205ENST00000504178 PCDH15Q96QU1 1955 aa5.16□□□□□ -1.58
SYNPO2-205ENST00000504178 Q6ZVQ6 151 aa5.15□□□□□ -1.58
SYNPO2-205ENST00000504178 TRBV10-3A0A0K0K1G6 114 aa5.15□□□□□ -1.58
SYNPO2-205ENST00000504178 C1orf137Q5JT78 98 aa5.15□□□□□ -1.58
SYNPO2-205ENST00000504178 CNFNQ9BYD5 112 aa5.15□□□□□ -1.58
SYNPO2-205ENST00000504178 SPTBN1Q01082 2364 aaKnown RBP5.15□□□□□ -1.58
SYNPO2-205ENST00000504178 IGLV4-60A0A075B6I1 120 aa5.15□□□□□ -1.58
SYNPO2-205ENST00000504178 LINC01556Q5JQF7 62 aa5.15□□□□□ -1.58
SYNPO2-205ENST00000504178 C1orf134Q5TEV5 83 aa5.15□□□□□ -1.58
SYNPO2-205ENST00000504178 SERP2Q8N6R1 65 aa5.15□□□□□ -1.59
SYNPO2-205ENST00000504178 RETNLBQ9BQ08 111 aa5.15□□□□□ -1.59
SYNPO2-205ENST00000504178 AKAP6Q13023 2319 aa5.15□□□□□ -1.59
SYNPO2-205ENST00000504178 SMIM1B2RUZ4 78 aa5.15□□□□□ -1.59
SYNPO2-205ENST00000504178 PRR4Q16378 134 aa5.15□□□□□ -1.59
SYNPO2-205ENST00000504178 Q8N814 137 aa5.14□□□□□ -1.59
SYNPO2-205ENST00000504178 CPAMD8Q8IZJ3 1885 aa5.14□□□□□ -1.59
SYNPO2-205ENST00000504178 Q6JHZ5 121 aa5.14□□□□□ -1.59
SYNPO2-205ENST00000504178 LINC00694P0DN24 101 aa5.14□□□□□ -1.59
SYNPO2-205ENST00000504178 PCNX3Q9H6A9 2034 aa5.14□□□□□ -1.59
SYNPO2-205ENST00000504178 WNK2Q9Y3S1 2297 aa5.14□□□□□ -1.59
SYNPO2-205ENST00000504178 IGHV6-1A0A0B4J1U7 121 aa5.14□□□□□ -1.59
SYNPO2-205ENST00000504178 PCNX1Q96RV3 2341 aa5.14□□□□□ -1.59
SYNPO2-205ENST00000504178 ABCA4P78363 2273 aa5.14□□□□□ -1.59
SYNPO2-205ENST00000504178 F8WDY8 70 aa5.13□□□□□ -1.59
SYNPO2-205ENST00000504178 A0A087WYN8 130 aa5.13□□□□□ -1.59
SYNPO2-205ENST00000504178 DSCAMO60469 2012 aa5.13□□□□□ -1.59
SYNPO2-205ENST00000504178 MED12LQ86YW9 2145 aa5.13□□□□□ -1.59
SYNPO2-205ENST00000504178 ZFHX2Q9C0A1 2572 aaPredicted RBP5.13□□□□□ -1.59
SYNPO2-205ENST00000504178 IMUPQ9GZP8 106 aa5.13□□□□□ -1.59
SYNPO2-205ENST00000504178 Q9BRP9 147 aa5.13□□□□□ -1.59
SYNPO2-205ENST00000504178 C10orf142B7Z368 130 aa5.13□□□□□ -1.59
SYNPO2-205ENST00000504178 PRR3P79522 188 aaKnown RBP5.13□□□□□ -1.59
SYNPO2-205ENST00000504178 PCNX2A6NKB5 2137 aa5.13□□□□□ -1.59
SYNPO2-205ENST00000504178 A6NED7 52 aa5.12□□□□□ -1.59
SYNPO2-205ENST00000504178 LYPD5Q6UWN5 251 aa5.12□□□□□ -1.59
SYNPO2-205ENST00000504178 NTM-AS1Q6ZSK4 140 aa5.12□□□□□ -1.59
SYNPO2-205ENST00000504178 A0A0U1RQV1 116 aa5.12□□□□□ -1.59
SYNPO2-205ENST00000504178 Q6ZSN1 163 aa5.12□□□□□ -1.59
SYNPO2-205ENST00000504178 CELA1Q9UNI1 258 aa5.12□□□□□ -1.59
SYNPO2-205ENST00000504178 MDFIQ99750 246 aa5.12□□□□□ -1.59
SYNPO2-205ENST00000504178 MUC6Q6W4X9 2439 aa5.12□□□□□ -1.59
SYNPO2-205ENST00000504178 PRYO14603 147 aa5.12□□□□□ -1.59
SYNPO2-205ENST00000504178 ZNF580Q9UK33 172 aa5.12□□□□□ -1.59
SYNPO2-205ENST00000504178 CADP27708 2225 aa5.11□□□□□ -1.59
SYNPO2-205ENST00000504178 A0A1W2PPR1 153 aa5.11□□□□□ -1.59
SYNPO2-205ENST00000504178 FSHBP01225 129 aa5.11□□□□□ -1.59
SYNPO2-205ENST00000504178 TSPEAR-AS2P59090 65 aa5.11□□□□□ -1.59
SYNPO2-205ENST00000504178 PLA2G1BP04054 148 aaKnown RBP5.11□□□□□ -1.59
SYNPO2-205ENST00000504178 COX7CP15954 63 aa5.1□□□□□ -1.59
SYNPO2-205ENST00000504178 BEAN1Q3B7T3 259 aa5.1□□□□□ -1.59
SYNPO2-205ENST00000504178 C2orf48Q96LS8 159 aa5.1□□□□□ -1.59
SYNPO2-205ENST00000504178 AMELXQ99217 191 aa5.1□□□□□ -1.59
SYNPO2-205ENST00000504178 NHLRC4P0CG21 123 aaPredicted RBP5.1□□□□□ -1.59
SYNPO2-205ENST00000504178 CCDC179H3BU77 68 aa5.09□□□□□ -1.59
SYNPO2-205ENST00000504178 URB1-AS1Q96HZ7 61 aa5.09□□□□□ -1.59
SYNPO2-205ENST00000504178 CSDC2Q9Y534 153 aaKnown RBP5.09□□□□□ -1.59
SYNPO2-205ENST00000504178 CDH23Q9H251 3354 aa5.09□□□□□ -1.59
SYNPO2-205ENST00000504178 ROS1P08922 2347 aa5.09□□□□□ -1.59
SYNPO2-205ENST00000504178 GPR179Q6PRD1 2367 aa5.09□□□□□ -1.59
SYNPO2-205ENST00000504178 ADAMTSL4-AS1Q5T5F5 129 aa5.08□□□□□ -1.6
SYNPO2-205ENST00000504178 X6R8D5 127 aa5.08□□□□□ -1.6
SYNPO2-205ENST00000504178 NBASA2RRP1 2371 aa5.08□□□□□ -1.6
SYNPO2-205ENST00000504178 FREM1Q5H8C1 2179 aa5.08□□□□□ -1.6
SYNPO2-205ENST00000504178 A0A1B0GUV1 79 aa5.08□□□□□ -1.6
SYNPO2-205ENST00000504178 FHL3Q13643 280 aa5.08□□□□□ -1.6
SYNPO2-205ENST00000504178 LINC01561Q8N1V8 128 aa5.08□□□□□ -1.6
SYNPO2-205ENST00000504178 LINC00208Q96KT6 92 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms