RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 C7orf77A4D0Y5 90 aa0.58□□□□□ -2.32
SUB1-204ENST00000504016 FAM223BA6NKX1 122 aa0.58□□□□□ -2.32
SUB1-204ENST00000504016 H7BZZ5 65 aa0.58□□□□□ -2.32
SUB1-204ENST00000504016 FDCSPQ8NFU4 85 aa0.58□□□□□ -2.32
SUB1-204ENST00000504016 RAPGEF2Q9Y4G8 1499 aa0.58□□□□□ -2.32
SUB1-204ENST00000504016 HMGXB3Q12766 1538 aa0.58□□□□□ -2.32
SUB1-204ENST00000504016 PRDM2Q13029 1718 aa0.58□□□□□ -2.32
SUB1-204ENST00000504016 IFT172Q9UG01 1749 aa0.58□□□□□ -2.32
SUB1-204ENST00000504016 BAZ1AQ9NRL2 1556 aaPredicted RBP0.57□□□□□ -2.32
SUB1-204ENST00000504016 ADGRL2O95490 1459 aa0.57□□□□□ -2.32
SUB1-204ENST00000504016 IQSEC2Q5JU85 1478 aa0.57□□□□□ -2.32
SUB1-204ENST00000504016 M0R3E3 92 aa0.57□□□□□ -2.32
SUB1-204ENST00000504016 PEA15Q15121 130 aa0.57□□□□□ -2.32
SUB1-204ENST00000504016 PIGYQ3MUY2 71 aa0.57□□□□□ -2.32
SUB1-204ENST00000504016 ETDBQ3ZM63 59 aa0.57□□□□□ -2.32
SUB1-204ENST00000504016 LINC00472Q9H8W2 130 aa0.57□□□□□ -2.32
SUB1-204ENST00000504016 EPRSP07814 1512 aaKnown RBP0.57□□□□□ -2.32
SUB1-204ENST00000504016 SSC5DA1L4H1 1573 aa0.57□□□□□ -2.32
SUB1-204ENST00000504016 TTC37Q6PGP7 1564 aa0.57□□□□□ -2.32
SUB1-204ENST00000504016 PSME4Q14997 1843 aa0.57□□□□□ -2.32
SUB1-204ENST00000504016 PLIN4Q96Q06 1357 aa0.57□□□□□ -2.32
SUB1-204ENST00000504016 POLA1P09884 1462 aaPredicted RBP0.56□□□□□ -2.32
SUB1-204ENST00000504016 C10orf113Q5VZT2 155 aa0.56□□□□□ -2.32
SUB1-204ENST00000504016 SPINK6Q6UWN8 80 aa0.56□□□□□ -2.32
SUB1-204ENST00000504016 ERCC6L2Q5T890 1561 aa0.56□□□□□ -2.32
SUB1-204ENST00000504016 SPTBN2O15020 2390 aa0.56□□□□□ -2.32
SUB1-204ENST00000504016 CACNA1HO95180 2353 aa0.56□□□□□ -2.32
SUB1-204ENST00000504016 KIF21AQ7Z4S6 1674 aa0.56□□□□□ -2.32
SUB1-204ENST00000504016 ABCA12Q86UK0 2595 aa0.55□□□□□ -2.32
SUB1-204ENST00000504016 PLEKHH2Q8IVE3 1493 aa0.55□□□□□ -2.32
SUB1-204ENST00000504016 D6R8Y8 96 aa0.55□□□□□ -2.32
SUB1-204ENST00000504016 ARMS2P0C7Q2 107 aa0.55□□□□□ -2.32
SUB1-204ENST00000504016 GNGT1P63211 74 aa0.55□□□□□ -2.32
SUB1-204ENST00000504016 KRTAP19-3Q7Z4W3 81 aa0.55□□□□□ -2.32
SUB1-204ENST00000504016 MUSTN1Q8IVN3 82 aa0.55□□□□□ -2.32
SUB1-204ENST00000504016 LCN9Q8WX39 176 aa0.55□□□□□ -2.32
SUB1-204ENST00000504016 S100A16Q96FQ6 103 aaKnown RBP0.55□□□□□ -2.32
SUB1-204ENST00000504016 TP53AIP1Q9HCN2 124 aa0.55□□□□□ -2.32
SUB1-204ENST00000504016 SHROOM2Q13796 1616 aa0.55□□□□□ -2.32
SUB1-204ENST00000504016 CC2D2AQ9P2K1 1620 aa0.55□□□□□ -2.32
SUB1-204ENST00000504016 TOPAZ1Q8N9V7 1692 aa0.55□□□□□ -2.32
SUB1-204ENST00000504016 SBF2Q86WG5 1849 aa0.54□□□□□ -2.32
SUB1-204ENST00000504016 FANCAO15360 1455 aa0.54□□□□□ -2.32
SUB1-204ENST00000504016 ATP10BO94823 1461 aa0.54□□□□□ -2.32
SUB1-204ENST00000504016 CCDC141Q6ZP82 1450 aa0.54□□□□□ -2.32
SUB1-204ENST00000504016 ANKRD17O75179 2603 aaKnown RBP0.54□□□□□ -2.32
SUB1-204ENST00000504016 ARHGEF12Q9NZN5 1544 aa0.54□□□□□ -2.32
SUB1-204ENST00000504016 F8P00451 2351 aa0.54□□□□□ -2.32
SUB1-204ENST00000504016 KDM5AP29375 1690 aaKnown RBP0.54□□□□□ -2.32
SUB1-204ENST00000504016 TRBV7-4A0A0J9YYF1 115 aa0.54□□□□□ -2.32
SUB1-204ENST00000504016 LEPROTL1O95214 131 aa0.54□□□□□ -2.32
SUB1-204ENST00000504016 CYB5AP00167 134 aa0.54□□□□□ -2.32
SUB1-204ENST00000504016 ACYP1P07311 99 aa0.54□□□□□ -2.32
SUB1-204ENST00000504016 LINC01600Q96MT4 127 aa0.54□□□□□ -2.32
SUB1-204ENST00000504016 PRO0255Q9UI72 69 aa0.54□□□□□ -2.32
SUB1-204ENST00000504016 ABCA3Q99758 1704 aa0.54□□□□□ -2.32
SUB1-204ENST00000504016 ZFHX3Q15911 3703 aa0.54□□□□□ -2.32
SUB1-204ENST00000504016 POLQO75417 2590 aa0.53□□□□□ -2.32
SUB1-204ENST00000504016 TOP2BQ02880 1626 aa0.53□□□□□ -2.32
SUB1-204ENST00000504016 CHD9Q3L8U1 2897 aa0.53□□□□□ -2.32
SUB1-204ENST00000504016 CACNA1EQ15878 2313 aa0.53□□□□□ -2.32
SUB1-204ENST00000504016 WNK3Q9BYP7 1800 aa0.53□□□□□ -2.32
SUB1-204ENST00000504016 PIEZO1Q92508 2521 aa0.53□□□□□ -2.32
SUB1-204ENST00000504016 KANTRA0A1W2PQU2 76 aa0.53□□□□□ -2.32
SUB1-204ENST00000504016 H0Y9P7 68 aa0.53□□□□□ -2.32
SUB1-204ENST00000504016 K7EP34 96 aa0.53□□□□□ -2.32
SUB1-204ENST00000504016 SNRPFP62306 86 aaKnown RBP0.53□□□□□ -2.32
SUB1-204ENST00000504016 Q8IZM0 81 aa0.53□□□□□ -2.32
SUB1-204ENST00000504016 C9orf62Q8N4C0 152 aa0.53□□□□□ -2.32
SUB1-204ENST00000504016 USMG5Q96IX5 58 aa0.53□□□□□ -2.32
SUB1-204ENST00000504016 S100A13Q99584 98 aa0.53□□□□□ -2.32
SUB1-204ENST00000504016 UACAQ9BZF9 1416 aa0.53□□□□□ -2.32
SUB1-204ENST00000504016 KCPQ6ZWJ8 1503 aa0.53□□□□□ -2.33
SUB1-204ENST00000504016 RB1CC1Q8TDY2 1594 aa0.53□□□□□ -2.33
SUB1-204ENST00000504016 SETBP1Q9Y6X0 1596 aa0.53□□□□□ -2.33
SUB1-204ENST00000504016 TTC28Q96AY4 2481 aa0.53□□□□□ -2.33
SUB1-204ENST00000504016 MARF1Q9Y4F3 1742 aaKnown RBP0.52□□□□□ -2.33
SUB1-204ENST00000504016 A0A087WVE0 104 aa0.52□□□□□ -2.33
SUB1-204ENST00000504016 F8WEM9 126 aa0.52□□□□□ -2.33
SUB1-204ENST00000504016 HMGN2P05204 90 aaKnown RBP0.52□□□□□ -2.33
SUB1-204ENST00000504016 C20orf78Q9BR46 151 aa0.52□□□□□ -2.33
SUB1-204ENST00000504016 EDC4Q6P2E9 1401 aaKnown RBP0.52□□□□□ -2.33
SUB1-204ENST00000504016 ABCC3O15438 1527 aa0.52□□□□□ -2.33
SUB1-204ENST00000504016 TET3O43151 1660 aa0.52□□□□□ -2.33
SUB1-204ENST00000504016 KDM3BQ7LBC6 1761 aa0.52□□□□□ -2.33
SUB1-204ENST00000504016 CACNA1CQ13936 2221 aa0.52□□□□□ -2.33
SUB1-204ENST00000504016 MEGF8Q7Z7M0 2845 aa0.51□□□□□ -2.33
SUB1-204ENST00000504016 A0A1B0GU69 56 aa0.51□□□□□ -2.33
SUB1-204ENST00000504016 CHD1O14646 1710 aa0.51□□□□□ -2.33
SUB1-204ENST00000504016 ZNF292O60281 2723 aa0.51□□□□□ -2.33
SUB1-204ENST00000504016 COX8AP10176 69 aa0.51□□□□□ -2.33
SUB1-204ENST00000504016 TPRP12270 2363 aaKnown RBP0.51□□□□□ -2.33
SUB1-204ENST00000504016 AKAP12Q02952 1782 aa0.51□□□□□ -2.33
SUB1-204ENST00000504016 PDCD11Q14690 1871 aaKnown RBP0.51□□□□□ -2.33
SUB1-204ENST00000504016 PLGLAQ15195 96 aa0.51□□□□□ -2.33
SUB1-204ENST00000504016 C1orf167Q5SNV9 1468 aa0.51□□□□□ -2.33
SUB1-204ENST00000504016 C6orf201Q7Z4U5 140 aa0.51□□□□□ -2.33
SUB1-204ENST00000504016 C2CD3Q4AC94 2353 aa0.5□□□□□ -2.33
SUB1-204ENST00000504016 LRP6O75581 1613 aa0.5□□□□□ -2.33
SUB1-204ENST00000504016 CEP162Q5TB80 1403 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms