RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 C15orf53Q8NAA6 179 aa4.68□□□□□ -1.66
TOPBP1-203ENST00000503464 C2orf88Q9BSF0 95 aa4.68□□□□□ -1.66
TOPBP1-203ENST00000503464 CDKN2A-AS1Q9UH64 79 aa4.68□□□□□ -1.66
TOPBP1-203ENST00000503464 APLNQ9ULZ1 77 aa4.68□□□□□ -1.66
TOPBP1-203ENST00000503464 IGKV3OR2-268A0A0C4DH90 116 aa4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 LINC00959A0A1B0GUT2 108 aa4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 LINC00587B1AMM8 73 aa4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 E9PLD3 99 aa4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 IGHV3-30P01768 117 aa4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 IGHV3-33P01772 117 aa4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 IGHV3-30-3P0DP02 117 aa4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 IGHV3-30-5P0DP03 117 aa4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 COX8AP10176 69 aa4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 SMAGPQ0VAQ4 97 aa4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 TMEM170BQ5T4T1 132 aa4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 ENHOQ6UWT2 76 aa4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 C2orf91Q6ZV80 131 aa4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 BOD1L2Q8IYS8 172 aa4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 LINC00269Q8N2A0 174 aa4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 MAPKAPK5-AS1Q8N8E1 139 aa4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 PRR34Q9NV39 138 aa4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 MRPS16Q9Y3D3 137 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-203ENST00000503464 IGHV3-64A0A075B6Q5 118 aa4.66□□□□□ -1.66
TOPBP1-203ENST00000503464 TRAV8-3A0A0A6YYJ7 113 aa4.66□□□□□ -1.66
TOPBP1-203ENST00000503464 TRAV8-6A0A0B4J262 113 aa4.66□□□□□ -1.66
TOPBP1-203ENST00000503464 IGHV3OR16-9A0A0B4J2B5 98 aa4.66□□□□□ -1.66
TOPBP1-203ENST00000503464 HSBP1L1C9JCN9 74 aa4.66□□□□□ -1.66
TOPBP1-203ENST00000503464 TSTD3H0UI37 97 aa4.66□□□□□ -1.66
TOPBP1-203ENST00000503464 ANGP03950 147 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-203ENST00000503464 DDTP30046 118 aa4.66□□□□□ -1.66
TOPBP1-203ENST00000503464 NMUP48645 174 aa4.66□□□□□ -1.66
TOPBP1-203ENST00000503464 LINC00469Q8N7U9 141 aa4.66□□□□□ -1.66
TOPBP1-203ENST00000503464 MIEN1Q9BRT3 115 aa4.66□□□□□ -1.66
TOPBP1-203ENST00000503464 UQCR10Q9UDW1 63 aa4.66□□□□□ -1.66
TOPBP1-203ENST00000503464 KLK12Q9UKR0 248 aa4.66□□□□□ -1.66
TOPBP1-203ENST00000503464 IGLV5-39A0A0G2JS06 123 aa4.65□□□□□ -1.67
TOPBP1-203ENST00000503464 SMIM1B2RUZ4 78 aa4.65□□□□□ -1.67
TOPBP1-203ENST00000503464 SPINK8P0C7L1 97 aa4.65□□□□□ -1.67
TOPBP1-203ENST00000503464 DNAH10OSP0CZ25 163 aa4.65□□□□□ -1.67
TOPBP1-203ENST00000503464 HERVK_113P63121 156 aa4.65□□□□□ -1.67
TOPBP1-203ENST00000503464 REG3AQ06141 175 aa4.65□□□□□ -1.67
TOPBP1-203ENST00000503464 LINC01556Q5JQF7 62 aa4.65□□□□□ -1.67
TOPBP1-203ENST00000503464 KRTAP26-1Q6PEX3 210 aa4.65□□□□□ -1.67
TOPBP1-203ENST00000503464 UPK3BQ9BT76 320 aa4.65□□□□□ -1.67
TOPBP1-203ENST00000503464 KRTAP17-1Q9BYP8 105 aa4.65□□□□□ -1.67
TOPBP1-203ENST00000503464 GEMIN7Q9H840 131 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-203ENST00000503464 IGLV10-54A0A075B6I4 117 aa4.64□□□□□ -1.67
TOPBP1-203ENST00000503464 IGHV1-58A0A0C4DH39 117 aa4.64□□□□□ -1.67
TOPBP1-203ENST00000503464 NUPR2A6NF83 97 aa4.64□□□□□ -1.67
TOPBP1-203ENST00000503464 CCL25O15444 150 aa4.64□□□□□ -1.67
TOPBP1-203ENST00000503464 DLEU1O43261 78 aa4.64□□□□□ -1.67
TOPBP1-203ENST00000503464 XCL1P47992 114 aa4.64□□□□□ -1.67
TOPBP1-203ENST00000503464 FOXI1Q12951 378 aa4.64□□□□□ -1.67
TOPBP1-203ENST00000503464 SLC25A34Q6PIV7 304 aa4.64□□□□□ -1.67
TOPBP1-203ENST00000503464 CHCHD10Q8WYQ3 142 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-203ENST00000503464 PLEKHB2Q96CS7 222 aa4.64□□□□□ -1.67
TOPBP1-203ENST00000503464 KRTAP1-5Q9BYS1 174 aa4.64□□□□□ -1.67
TOPBP1-203ENST00000503464 A0A087WZ39 114 aa4.63□□□□□ -1.67
TOPBP1-203ENST00000503464 A6NJY4 79 aa4.63□□□□□ -1.67
TOPBP1-203ENST00000503464 J3QQQ9 107 aa4.63□□□□□ -1.67
TOPBP1-203ENST00000503464 LEPROTO15243 131 aa4.63□□□□□ -1.67
TOPBP1-203ENST00000503464 HERVK_113P61574 105 aa4.63□□□□□ -1.67
TOPBP1-203ENST00000503464 SEC11AP67812 179 aa4.63□□□□□ -1.67
TOPBP1-203ENST00000503464 ZFAND6Q6FIF0 208 aa4.63□□□□□ -1.67
TOPBP1-203ENST00000503464 C5orf38Q86SI9 138 aa4.63□□□□□ -1.67
TOPBP1-203ENST00000503464 TGP01266 2768 aa4.63□□□□□ -1.67
TOPBP1-203ENST00000503464 DNAH6Q9C0G6 4158 aa4.62□□□□□ -1.67
TOPBP1-203ENST00000503464 ALMS1Q8TCU4 4167 aa4.62□□□□□ -1.67
TOPBP1-203ENST00000503464 MYMXA0A1B0GTQ4 84 aa4.62□□□□□ -1.67
TOPBP1-203ENST00000503464 H3BRM9 83 aa4.62□□□□□ -1.67
TOPBP1-203ENST00000503464 SIVA1O15304 175 aa4.62□□□□□ -1.67
TOPBP1-203ENST00000503464 HNRNPA3P51991 378 aaKnown RBP4.62□□□□□ -1.67
TOPBP1-203ENST00000503464 CCL18P55774 89 aa4.62□□□□□ -1.67
TOPBP1-203ENST00000503464 SS18Q15532 418 aa4.62□□□□□ -1.67
TOPBP1-203ENST00000503464 CD164L2Q6UWJ8 174 aa4.62□□□□□ -1.67
TOPBP1-203ENST00000503464 C10orf126Q8N4M7 172 aa4.62□□□□□ -1.67
TOPBP1-203ENST00000503464 UBE2WQ96B02 151 aa4.62□□□□□ -1.67
TOPBP1-203ENST00000503464 DNAH10Q8IVF4 4471 aa4.62□□□□□ -1.67
TOPBP1-203ENST00000503464 TENM2Q9NT68 2774 aa4.62□□□□□ -1.67
TOPBP1-203ENST00000503464 GAGE12HA6NDE8 117 aa4.61□□□□□ -1.67
TOPBP1-203ENST00000503464 ZNF815PA8K554 130 aa4.61□□□□□ -1.67
TOPBP1-203ENST00000503464 EREGO14944 169 aa4.61□□□□□ -1.67
TOPBP1-203ENST00000503464 CTAG1AP78358 180 aa4.61□□□□□ -1.67
TOPBP1-203ENST00000503464 ZNF625Q96I27 306 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-203ENST00000503464 KLK5Q9Y337 293 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-203ENST00000503464 IBA57-AS1B1ANH7 110 aa4.6□□□□□ -1.67
TOPBP1-203ENST00000503464 CRPP02741 224 aa4.6□□□□□ -1.67
TOPBP1-203ENST00000503464 LGALS3P17931 250 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-203ENST00000503464 TNP2Q05952 138 aa4.6□□□□□ -1.67
TOPBP1-203ENST00000503464 KIAA0087Q14695 138 aa4.6□□□□□ -1.67
TOPBP1-203ENST00000503464 MIAQ16674 131 aa4.6□□□□□ -1.67
TOPBP1-203ENST00000503464 LINC01561Q8N1V8 128 aa4.6□□□□□ -1.67
TOPBP1-203ENST00000503464 MUC7Q8TAX7 377 aa4.6□□□□□ -1.67
TOPBP1-203ENST00000503464 LITAFQ99732 161 aa4.6□□□□□ -1.67
TOPBP1-203ENST00000503464 SNHG12Q9BXW3 62 aa4.6□□□□□ -1.67
TOPBP1-203ENST00000503464 Q9H8V8 135 aa4.6□□□□□ -1.67
TOPBP1-203ENST00000503464 HIGD1BQ9P298 99 aa4.6□□□□□ -1.67
TOPBP1-203ENST00000503464 TRAV8-4A0A0B4J246 113 aa4.59□□□□□ -1.67
TOPBP1-203ENST00000503464 A0A0J9YXY3 114 aa4.59□□□□□ -1.67
TOPBP1-203ENST00000503464 COX7A2LO14548 114 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms