RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 HIST2H2BCQ6DN03 193 aa17.37■□□□□ 0.37
DDX41-202ENST00000503078 CHCHD5Q9BSY4 110 aa17.37■□□□□ 0.37
DDX41-202ENST00000503078 IMUPQ9GZP8 106 aa17.37■□□□□ 0.37
DDX41-202ENST00000503078 PF4P02776 101 aa17.36■□□□□ 0.37
DDX41-202ENST00000503078 TRAV13-2A0A0B4J235 113 aa17.36■□□□□ 0.37
DDX41-202ENST00000503078 LRRC75A-AS1Q8N1F1 130 aa17.36■□□□□ 0.37
DDX41-202ENST00000503078 NOP10Q9NPE3 64 aaKnown RBP17.36■□□□□ 0.37
DDX41-202ENST00000503078 C22orf24Q9Y442 160 aa17.35■□□□□ 0.37
DDX41-202ENST00000503078 FAM222AQ5U5X8 452 aa17.35■□□□□ 0.37
DDX41-202ENST00000503078 SMCR5Q8TEV8 140 aa17.35■□□□□ 0.37
DDX41-202ENST00000503078 RPL28P46779 137 aaKnown RBP17.34■□□□□ 0.37
DDX41-202ENST00000503078 LINC00643Q86TS7 51 aa17.33■□□□□ 0.37
DDX41-202ENST00000503078 COX7B2Q8TF08 81 aa17.33■□□□□ 0.36
DDX41-202ENST00000503078 CRPP02741 224 aa17.32■□□□□ 0.36
DDX41-202ENST00000503078 MIR7-3HGQ8N6C7 128 aa17.31■□□□□ 0.36
DDX41-202ENST00000503078 SDIM1Q6ZPB5 146 aa17.31■□□□□ 0.36
DDX41-202ENST00000503078 MYO9AB2RTY4 2548 aa17.3■□□□□ 0.36
DDX41-202ENST00000503078 FAM236AA0A1B0GUQ0 79 aa17.3■□□□□ 0.36
DDX41-202ENST00000503078 FAM236BA0A1B0GV22 79 aa17.3■□□□□ 0.36
DDX41-202ENST00000503078 LINC00337Q8N6G1 96 aa17.3■□□□□ 0.36
DDX41-202ENST00000503078 A0A1W2PRX2 142 aa17.29■□□□□ 0.36
DDX41-202ENST00000503078 INAFM2P0DMQ5 153 aa17.29■□□□□ 0.36
DDX41-202ENST00000503078 LOC100131303A0A0U1RQF7 123 aa17.29■□□□□ 0.36
DDX41-202ENST00000503078 SND1-IT1Q9HBX3 110 aa17.29■□□□□ 0.36
DDX41-202ENST00000503078 IGKV2-28A0A075B6P5 120 aa17.28■□□□□ 0.36
DDX41-202ENST00000503078 TRGV2A0A075B6R0 118 aa17.28■□□□□ 0.36
DDX41-202ENST00000503078 CCL24O00175 119 aa17.28■□□□□ 0.36
DDX41-202ENST00000503078 IGKV2D-28P01615 120 aa17.28■□□□□ 0.36
DDX41-202ENST00000503078 C11orf44Q8N8P7 122 aa17.28■□□□□ 0.36
DDX41-202ENST00000503078 Q9HAA7 133 aa17.28■□□□□ 0.36
DDX41-202ENST00000503078 TEX15Q9BXT5 2789 aa17.28■□□□□ 0.36
DDX41-202ENST00000503078 APCP25054 2843 aa17.28■□□□□ 0.36
DDX41-202ENST00000503078 KRTAP1-3Q8IUG1 177 aa17.28■□□□□ 0.36
DDX41-202ENST00000503078 TOMM7Q9P0U1 55 aa17.28■□□□□ 0.36
DDX41-202ENST00000503078 PLAC8L1A1L4L8 177 aa17.27■□□□□ 0.36
DDX41-202ENST00000503078 MALP21145 153 aa17.27■□□□□ 0.36
DDX41-202ENST00000503078 TMEM86BQ8N661 226 aa17.27■□□□□ 0.36
DDX41-202ENST00000503078 C16orf74Q96GX8 76 aa17.27■□□□□ 0.36
DDX41-202ENST00000503078 TRBV6-4A0A1B0GX49 114 aa17.26■□□□□ 0.35
DDX41-202ENST00000503078 GIG44P09565 113 aaPredicted RBP17.26■□□□□ 0.35
DDX41-202ENST00000503078 OVOL2Q9BRP0 275 aa17.25■□□□□ 0.35
DDX41-202ENST00000503078 AKAP9Q99996 3911 aa17.25■□□□□ 0.35
DDX41-202ENST00000503078 IGKV3OR2-268A0A0C4DH90 116 aa17.24■□□□□ 0.35
DDX41-202ENST00000503078 LINC00158P58513 81 aa17.24■□□□□ 0.35
DDX41-202ENST00000503078 CHD6Q8TD26 2715 aa17.23■□□□□ 0.35
DDX41-202ENST00000503078 GAGE2AQ6NT46 116 aa17.22■□□□□ 0.35
DDX41-202ENST00000503078 SMIM11BQ8TCY0 68 aa17.22■□□□□ 0.35
DDX41-202ENST00000503078 IGLV4-60A0A075B6I1 120 aa17.21■□□□□ 0.35
DDX41-202ENST00000503078 IGHV3OR16-9A0A0B4J2B5 98 aa17.21■□□□□ 0.35
DDX41-202ENST00000503078 TRGV4A0A0C4DH28 118 aa17.21■□□□□ 0.35
DDX41-202ENST00000503078 WNK1Q9H4A3 2382 aa17.21■□□□□ 0.35
DDX41-202ENST00000503078 CCL18P55774 89 aa17.21■□□□□ 0.34
DDX41-202ENST00000503078 CMC4P56277 68 aaPredicted RBP17.21■□□□□ 0.34
DDX41-202ENST00000503078 DNAL4O96015 105 aa17.2■□□□□ 0.34
DDX41-202ENST00000503078 A0A087WYN8 130 aa17.2■□□□□ 0.34
DDX41-202ENST00000503078 CXCL5P42830 114 aa17.2■□□□□ 0.34
DDX41-202ENST00000503078 TRBV6-8A0A0A6YYG3 113 aa17.19■□□□□ 0.34
DDX41-202ENST00000503078 DNAJC9-AS1A6NH13 148 aa17.19■□□□□ 0.34
DDX41-202ENST00000503078 IBA57-AS1B1ANH7 110 aa17.19■□□□□ 0.34
DDX41-202ENST00000503078 C2CD3Q4AC94 2353 aa17.18■□□□□ 0.34
DDX41-202ENST00000503078 H0YGX0 51 aa17.18■□□□□ 0.34
DDX41-202ENST00000503078 WFDC10AQ9H1F0 79 aa17.18■□□□□ 0.34
DDX41-202ENST00000503078 RPL35AP18077 110 aaKnown RBP17.17■□□□□ 0.34
DDX41-202ENST00000503078 C5orf38Q86SI9 138 aa17.17■□□□□ 0.34
DDX41-202ENST00000503078 A0A087WZ39 114 aa17.17■□□□□ 0.34
DDX41-202ENST00000503078 SMIM20Q8N5G0 67 aa17.16■□□□□ 0.34
DDX41-202ENST00000503078 TENM4Q6N022 2769 aa17.16■□□□□ 0.34
DDX41-202ENST00000503078 ATP5G1P05496 136 aa17.16■□□□□ 0.34
DDX41-202ENST00000503078 TMEM126AQ9H061 195 aa17.16■□□□□ 0.34
DDX41-202ENST00000503078 ITPR3Q14573 2671 aa17.15■□□□□ 0.34
DDX41-202ENST00000503078 FHL2Q14192 279 aa17.15■□□□□ 0.34
DDX41-202ENST00000503078 NOTCH3Q9UM47 2321 aa17.15■□□□□ 0.34
DDX41-202ENST00000503078 CSNK1G2-AS1Q8NCQ2 148 aa17.14■□□□□ 0.33
DDX41-202ENST00000503078 PLA2G2AP14555 144 aa17.14■□□□□ 0.33
DDX41-202ENST00000503078 PFN2P35080 140 aa17.14■□□□□ 0.33
DDX41-202ENST00000503078 ZNF469Q96JG9 3925 aaPredicted RBP17.13■□□□□ 0.33
DDX41-202ENST00000503078 WFDC11Q8NEX6 87 aa17.13■□□□□ 0.33
DDX41-202ENST00000503078 FAM110AQ9BQ89 295 aa17.13■□□□□ 0.33
DDX41-202ENST00000503078 C3orf56Q8N813 242 aa17.13■□□□□ 0.33
DDX41-202ENST00000503078 C19orf73Q9NVV2 129 aa17.12■□□□□ 0.33
DDX41-202ENST00000503078 TLN2Q9Y4G6 2542 aa17.12■□□□□ 0.33
DDX41-202ENST00000503078 C9orf129Q5T035 196 aaKnown RBP17.11■□□□□ 0.33
DDX41-202ENST00000503078 C3orf22Q8N5N4 141 aa17.11■□□□□ 0.33
DDX41-202ENST00000503078 NBPF19A0A087WUL8 3843 aa17.11■□□□□ 0.33
DDX41-202ENST00000503078 PAX4O43316 350 aa17.11■□□□□ 0.33
DDX41-202ENST00000503078 OBSCN-AS1Q96MR7 158 aa17.1■□□□□ 0.33
DDX41-202ENST00000503078 C14orf132Q9NPU4 83 aa17.1■□□□□ 0.33
DDX41-202ENST00000503078 ESM1Q9NQ30 184 aa17.1■□□□□ 0.33
DDX41-202ENST00000503078 LECT2O14960 151 aa17.09■□□□□ 0.33
DDX41-202ENST00000503078 LINC00959A0A1B0GUT2 108 aa17.09■□□□□ 0.33
DDX41-202ENST00000503078 UQCRQO14949 82 aa17.09■□□□□ 0.33
DDX41-202ENST00000503078 IGLV1-51P01701 117 aa17.08■□□□□ 0.32
DDX41-202ENST00000503078 C9orf153Q5TBE3 101 aa17.08■□□□□ 0.32
DDX41-202ENST00000503078 OR13C6PQ8NH95 151 aa17.08■□□□□ 0.32
DDX41-202ENST00000503078 C6orf226Q5I0X4 101 aa17.07■□□□□ 0.32
DDX41-202ENST00000503078 KLK5Q9Y337 293 aaPredicted RBP17.06■□□□□ 0.32
DDX41-202ENST00000503078 LY6G6DO95868 133 aa17.04■□□□□ 0.32
DDX41-202ENST00000503078 LINC00526Q96FQ7 95 aa17.04■□□□□ 0.32
DDX41-202ENST00000503078 C11orf68Q9H3H3 251 aaKnown RBP17.04■□□□□ 0.32
DDX41-202ENST00000503078 SETXQ7Z333 2677 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms