RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 TRAV4A0A0B4J268 109 aa8.29□□□□□ -1.08
USP46-204ENST00000503060 BRK1Q8WUW1 75 aa8.29□□□□□ -1.08
USP46-204ENST00000503060 LAMTOR3Q9UHA4 124 aa8.29□□□□□ -1.08
USP46-204ENST00000503060 CRYGAP11844 174 aa8.29□□□□□ -1.08
USP46-204ENST00000503060 WFDC2Q14508 124 aa8.29□□□□□ -1.08
USP46-204ENST00000503060 RBM12B-AS1Q9P1G2 102 aa8.29□□□□□ -1.08
USP46-204ENST00000503060 IGLV4-3A0A075B6K6 122 aa8.28□□□□□ -1.08
USP46-204ENST00000503060 PRYO14603 147 aa8.28□□□□□ -1.08
USP46-204ENST00000503060 Q6ZTI0 123 aa8.28□□□□□ -1.08
USP46-204ENST00000503060 CSNK1G2-AS1Q8NCQ2 148 aa8.28□□□□□ -1.08
USP46-204ENST00000503060 C8orf87E5RJ46 101 aa8.28□□□□□ -1.08
USP46-204ENST00000503060 MYMXA0A1B0GTQ4 84 aa8.27□□□□□ -1.09
USP46-204ENST00000503060 PAX4O43316 350 aa8.27□□□□□ -1.09
USP46-204ENST00000503060 HERVK_113P61574 105 aa8.27□□□□□ -1.09
USP46-204ENST00000503060 NFE4Q86UQ8 179 aa8.27□□□□□ -1.09
USP46-204ENST00000503060 C16orf74Q96GX8 76 aa8.27□□□□□ -1.09
USP46-204ENST00000503060 CHCHD7Q9BUK0 85 aa8.27□□□□□ -1.09
USP46-204ENST00000503060 NOP10Q9NPE3 64 aaKnown RBP8.27□□□□□ -1.09
USP46-204ENST00000503060 PLAC8L1A1L4L8 177 aa8.27□□□□□ -1.09
USP46-204ENST00000503060 INSL3P51460 131 aa8.27□□□□□ -1.09
USP46-204ENST00000503060 FN1P02751 2386 aaKnown RBP8.26□□□□□ -1.09
USP46-204ENST00000503060 TRAV13-1A0A0B4J241 112 aa8.26□□□□□ -1.09
USP46-204ENST00000503060 IGHV3-38A0A0C4DH36 116 aa8.26□□□□□ -1.09
USP46-204ENST00000503060 SH2D6Q7Z4S9 175 aa8.26□□□□□ -1.09
USP46-204ENST00000503060 PRR15Q8IV56 129 aa8.26□□□□□ -1.09
USP46-204ENST00000503060 PHLDA1Q8WV24 401 aaPredicted RBP8.26□□□□□ -1.09
USP46-204ENST00000503060 JMJD1CQ15652 2540 aa8.26□□□□□ -1.09
USP46-204ENST00000503060 TMEM170BQ5T4T1 132 aa8.25□□□□□ -1.09
USP46-204ENST00000503060 FAM104AQ969W3 186 aa8.25□□□□□ -1.09
USP46-204ENST00000503060 C2CD3Q4AC94 2353 aa8.25□□□□□ -1.09
USP46-204ENST00000503060 FXYD2P54710 66 aa8.25□□□□□ -1.09
USP46-204ENST00000503060 RAB37Q96AX2 223 aa8.25□□□□□ -1.09
USP46-204ENST00000503060 KLK5Q9Y337 293 aaPredicted RBP8.25□□□□□ -1.09
USP46-204ENST00000503060 NSD1Q96L73 2696 aaPredicted RBP8.25□□□□□ -1.09
USP46-204ENST00000503060 H3BMG7 143 aa8.24□□□□□ -1.09
USP46-204ENST00000503060 J3QL48 77 aa8.24□□□□□ -1.09
USP46-204ENST00000503060 K7EQD1 137 aa8.24□□□□□ -1.09
USP46-204ENST00000503060 CEND1Q8N111 149 aa8.24□□□□□ -1.09
USP46-204ENST00000503060 AMELXQ99217 191 aa8.24□□□□□ -1.09
USP46-204ENST00000503060 TRBV10-1A0A0K0K1A3 114 aa8.24□□□□□ -1.09
USP46-204ENST00000503060 ZNF815PA8K554 130 aa8.24□□□□□ -1.09
USP46-204ENST00000503060 TRACP01848 142 aa8.24□□□□□ -1.09
USP46-204ENST00000503060 C9orf66Q5T8R8 295 aa8.24□□□□□ -1.09
USP46-204ENST00000503060 CEMP1Q6PRD7 247 aaPredicted RBP8.24□□□□□ -1.09
USP46-204ENST00000503060 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.24□□□□□ -1.09
USP46-204ENST00000503060 OVOL2Q9BRP0 275 aa8.24□□□□□ -1.09
USP46-204ENST00000503060 TRBV7-3A0A075B6L6 115 aa8.23□□□□□ -1.09
USP46-204ENST00000503060 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.23□□□□□ -1.09
USP46-204ENST00000503060 A0A0J9YXV3 536 aa8.23□□□□□ -1.09
USP46-204ENST00000503060 IGKV2-29A2NJV5 120 aaPredicted RBP8.23□□□□□ -1.09
USP46-204ENST00000503060 UBE2D4Q9Y2X8 147 aa8.23□□□□□ -1.09
USP46-204ENST00000503060 RPL36AP83881 106 aaKnown RBP8.23□□□□□ -1.09
USP46-204ENST00000503060 RPL36ALQ969Q0 106 aaKnown RBP8.23□□□□□ -1.09
USP46-204ENST00000503060 NIPBLQ6KC79 2804 aaeCLIP8.23□□□□□ -1.09
USP46-204ENST00000503060 EIF4EBP3O60516 100 aaPredicted RBP8.22□□□□□ -1.09
USP46-204ENST00000503060 ZNF22P17026 224 aaPredicted RBP8.22□□□□□ -1.09
USP46-204ENST00000503060 TNP2Q05952 138 aa8.22□□□□□ -1.09
USP46-204ENST00000503060 PPDPFLQ8WWR9 84 aa8.22□□□□□ -1.09
USP46-204ENST00000503060 HIST1H4GQ99525 98 aa8.22□□□□□ -1.09
USP46-204ENST00000503060 TRGV2A0A075B6R0 118 aa8.22□□□□□ -1.09
USP46-204ENST00000503060 TMEM223A0PJW6 202 aa8.22□□□□□ -1.09
USP46-204ENST00000503060 EPM2AB3EWF7 344 aa8.22□□□□□ -1.09
USP46-204ENST00000503060 SMIM13P0DJ93 91 aa8.22□□□□□ -1.09
USP46-204ENST00000503060 TSPEAR-AS2P59090 65 aa8.22□□□□□ -1.09
USP46-204ENST00000503060 GAGE13Q4V321 117 aa8.22□□□□□ -1.09
USP46-204ENST00000503060 SLC25A29Q8N8R3 303 aa8.22□□□□□ -1.09
USP46-204ENST00000503060 HIVEP1P15822 2718 aa8.21□□□□□ -1.09
USP46-204ENST00000503060 UBE2D3P61077 147 aa8.21□□□□□ -1.1
USP46-204ENST00000503060 UBE2D2P62837 147 aa8.21□□□□□ -1.1
USP46-204ENST00000503060 RNASE13Q5GAN3 156 aaKnown RBP8.21□□□□□ -1.1
USP46-204ENST00000503060 SCGB1D4Q6XE38 83 aa8.21□□□□□ -1.1
USP46-204ENST00000503060 TRAV8-4A0A0B4J246 113 aa8.2□□□□□ -1.1
USP46-204ENST00000503060 MRPS36P82909 103 aaKnown RBP8.2□□□□□ -1.1
USP46-204ENST00000503060 LEPROTO15243 131 aa8.2□□□□□ -1.1
USP46-204ENST00000503060 MDFIQ99750 246 aa8.2□□□□□ -1.1
USP46-204ENST00000503060 TIMM21Q9BVV7 248 aa8.2□□□□□ -1.1
USP46-204ENST00000503060 PRO0461Q9UI25 63 aa8.2□□□□□ -1.1
USP46-204ENST00000503060 NOTCH3Q9UM47 2321 aa8.19□□□□□ -1.1
USP46-204ENST00000503060 NHP2Q9NX24 153 aaKnown RBP8.19□□□□□ -1.1
USP46-204ENST00000503060 K7ERJ3 54 aa8.19□□□□□ -1.1
USP46-204ENST00000503060 LGALS3P17931 250 aaKnown RBP8.19□□□□□ -1.1
USP46-204ENST00000503060 A0A0J9YY99 117 aa8.18□□□□□ -1.1
USP46-204ENST00000503060 TRBV6-4A0A1B0GX49 114 aa8.18□□□□□ -1.1
USP46-204ENST00000503060 NTM-AS1Q6ZSK4 140 aa8.18□□□□□ -1.1
USP46-204ENST00000503060 TRGV4A0A0C4DH28 118 aa8.18□□□□□ -1.1
USP46-204ENST00000503060 CHCHD5Q9BSY4 110 aa8.18□□□□□ -1.1
USP46-204ENST00000503060 IGHV3-64A0A075B6Q5 118 aa8.17□□□□□ -1.1
USP46-204ENST00000503060 COX7CP15954 63 aa8.17□□□□□ -1.1
USP46-204ENST00000503060 FHL2Q14192 279 aa8.17□□□□□ -1.1
USP46-204ENST00000503060 SBSPONQ8IVN8 264 aa8.17□□□□□ -1.1
USP46-204ENST00000503060 FAM30AQ9NZY2 134 aa8.17□□□□□ -1.1
USP46-204ENST00000503060 LOC100131303A0A0U1RQF7 123 aa8.16□□□□□ -1.1
USP46-204ENST00000503060 UBE2D1P51668 147 aa8.16□□□□□ -1.1
USP46-204ENST00000503060 SRSF9Q13242 221 aaKnown RBP eCLIP8.16□□□□□ -1.1
USP46-204ENST00000503060 LINC00612Q8N6U2 182 aa8.16□□□□□ -1.1
USP46-204ENST00000503060 DSCR8Q96T75 97 aa8.15□□□□□ -1.1
USP46-204ENST00000503060 TRBV7-6A0A0J9YX20 115 aa8.15□□□□□ -1.1
USP46-204ENST00000503060 WFDC9Q8NEX5 89 aa8.15□□□□□ -1.1
USP46-204ENST00000503060 SMIM26A0A096LP01 95 aa8.14□□□□□ -1.11
USP46-204ENST00000503060 IGHV3-30-3P0DP02 117 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms