RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 TOMM7Q9P0U1 55 aa13.22□□□□□ -0.29
SCARB2-203ENST00000502908 COX7A2LO14548 114 aa13.22□□□□□ -0.29
SCARB2-203ENST00000502908 GAGE6Q13070 117 aa13.22□□□□□ -0.29
SCARB2-203ENST00000502908 FAM218AQ96MZ4 157 aa13.22□□□□□ -0.29
SCARB2-203ENST00000502908 BBC3Q96PG8 261 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-203ENST00000502908 UBE2L6O14933 153 aa13.21□□□□□ -0.29
SCARB2-203ENST00000502908 RPL35AP18077 110 aaKnown RBP13.21□□□□□ -0.29
SCARB2-203ENST00000502908 DAZ2Q13117 558 aaKnown RBP13.21□□□□□ -0.3
SCARB2-203ENST00000502908 DEFB113Q30KQ7 82 aa13.21□□□□□ -0.3
SCARB2-203ENST00000502908 DAZ4Q86SG3 579 aaKnown RBP13.21□□□□□ -0.3
SCARB2-203ENST00000502908 DAZ3Q9NR90 486 aaKnown RBP13.21□□□□□ -0.3
SCARB2-203ENST00000502908 CCL24O00175 119 aa13.2□□□□□ -0.3
SCARB2-203ENST00000502908 MTORP42345 2549 aa13.2□□□□□ -0.3
SCARB2-203ENST00000502908 ACANP16112 2415 aa13.2□□□□□ -0.3
SCARB2-203ENST00000502908 TRGV2A0A075B6R0 118 aa13.2□□□□□ -0.3
SCARB2-203ENST00000502908 FN1P02751 2386 aaKnown RBP13.19□□□□□ -0.3
SCARB2-203ENST00000502908 SHISA2Q6UWI4 295 aa13.19□□□□□ -0.3
SCARB2-203ENST00000502908 Q9HAA7 133 aa13.18□□□□□ -0.3
SCARB2-203ENST00000502908 TRBV10-1A0A0K0K1A3 114 aa13.18□□□□□ -0.3
SCARB2-203ENST00000502908 DNAJC9-AS1A6NH13 148 aa13.18□□□□□ -0.3
SCARB2-203ENST00000502908 GIG44P09565 113 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-203ENST00000502908 TMEM243Q9BU79 118 aa13.18□□□□□ -0.3
SCARB2-203ENST00000502908 CSDC2Q9Y534 153 aaKnown RBP13.18□□□□□ -0.3
SCARB2-203ENST00000502908 DEFB121Q5J5C9 76 aa13.17□□□□□ -0.3
SCARB2-203ENST00000502908 CHCHD5Q9BSY4 110 aa13.17□□□□□ -0.3
SCARB2-203ENST00000502908 FAM19A3Q7Z5A8 133 aa13.16□□□□□ -0.3
SCARB2-203ENST00000502908 ESM1Q9NQ30 184 aa13.16□□□□□ -0.3
SCARB2-203ENST00000502908 Q6Q795 121 aa13.16□□□□□ -0.3
SCARB2-203ENST00000502908 MIR7-3HGQ8N6C7 128 aa13.16□□□□□ -0.3
SCARB2-203ENST00000502908 IGLV4-60A0A075B6I1 120 aa13.15□□□□□ -0.3
SCARB2-203ENST00000502908 PLAC8L1A1L4L8 177 aa13.15□□□□□ -0.3
SCARB2-203ENST00000502908 SMCR5Q8TEV8 140 aa13.15□□□□□ -0.3
SCARB2-203ENST00000502908 NBEAL2Q6ZNJ1 2754 aa13.14□□□□□ -0.31
SCARB2-203ENST00000502908 BAALC-AS2P0C853 105 aa13.14□□□□□ -0.31
SCARB2-203ENST00000502908 LINC00337Q8N6G1 96 aa13.14□□□□□ -0.31
SCARB2-203ENST00000502908 FAM240AA0A1B0GVK7 77 aa13.13□□□□□ -0.31
SCARB2-203ENST00000502908 KRTAP1-3Q8IUG1 177 aa13.13□□□□□ -0.31
SCARB2-203ENST00000502908 C11orf68Q9H3H3 251 aaKnown RBP13.13□□□□□ -0.31
SCARB2-203ENST00000502908 C3orf56Q8N813 242 aa13.13□□□□□ -0.31
SCARB2-203ENST00000502908 WFDC11Q8NEX6 87 aa13.13□□□□□ -0.31
SCARB2-203ENST00000502908 C22orf24Q9Y442 160 aa13.13□□□□□ -0.31
SCARB2-203ENST00000502908 GCN1Q92616 2671 aaKnown RBP13.12□□□□□ -0.31
SCARB2-203ENST00000502908 TRGV4A0A0C4DH28 118 aa13.12□□□□□ -0.31
SCARB2-203ENST00000502908 COX7B2Q8TF08 81 aa13.12□□□□□ -0.31
SCARB2-203ENST00000502908 TRAV25A0A0B4J276 109 aa13.12□□□□□ -0.31
SCARB2-203ENST00000502908 HERV-K104P63124 156 aa13.12□□□□□ -0.31
SCARB2-203ENST00000502908 IGKV2-28A0A075B6P5 120 aa13.11□□□□□ -0.31
SCARB2-203ENST00000502908 IGKV2D-28P01615 120 aa13.11□□□□□ -0.31
SCARB2-203ENST00000502908 LINC00158P58513 81 aa13.11□□□□□ -0.31
SCARB2-203ENST00000502908 COPS9Q8WXC6 57 aa13.11□□□□□ -0.31
SCARB2-203ENST00000502908 PFN2P35080 140 aa13.1□□□□□ -0.31
SCARB2-203ENST00000502908 C5orf38Q86SI9 138 aa13.1□□□□□ -0.31
SCARB2-203ENST00000502908 SND1-IT1Q9HBX3 110 aa13.1□□□□□ -0.31
SCARB2-203ENST00000502908 CRPP02741 224 aa13.1□□□□□ -0.31
SCARB2-203ENST00000502908 HIST2H2BCQ6DN03 193 aa13.09□□□□□ -0.31
SCARB2-203ENST00000502908 TENM4Q6N022 2769 aa13.08□□□□□ -0.32
SCARB2-203ENST00000502908 C16orf74Q96GX8 76 aa13.08□□□□□ -0.32
SCARB2-203ENST00000502908 A0A087WYN8 130 aa13.07□□□□□ -0.32
SCARB2-203ENST00000502908 FAM236AA0A1B0GUQ0 79 aa13.07□□□□□ -0.32
SCARB2-203ENST00000502908 FAM236BA0A1B0GV22 79 aa13.07□□□□□ -0.32
SCARB2-203ENST00000502908 TRACP01848 142 aa13.07□□□□□ -0.32
SCARB2-203ENST00000502908 MRPL23Q16540 153 aaKnown RBP13.07□□□□□ -0.32
SCARB2-203ENST00000502908 C9orf129Q5T035 196 aaKnown RBP13.07□□□□□ -0.32
SCARB2-203ENST00000502908 ATP5G1P05496 136 aa13.06□□□□□ -0.32
SCARB2-203ENST00000502908 DEFB130BP0DP73 79 aa13.06□□□□□ -0.32
SCARB2-203ENST00000502908 DEFB130AP0DP74 79 aa13.06□□□□□ -0.32
SCARB2-203ENST00000502908 GAGE2AQ6NT46 116 aa13.06□□□□□ -0.32
SCARB2-203ENST00000502908 SMIM11BQ8TCY0 68 aa13.06□□□□□ -0.32
SCARB2-203ENST00000502908 TRBV7-7A0A0K0K1E9 115 aa13.05□□□□□ -0.32
SCARB2-203ENST00000502908 TRAV13-2A0A0B4J235 113 aa13.05□□□□□ -0.32
SCARB2-203ENST00000502908 TRBV6-4A0A1B0GX49 114 aa13.05□□□□□ -0.32
SCARB2-203ENST00000502908 CCL18P55774 89 aa13.05□□□□□ -0.32
SCARB2-203ENST00000502908 CLPSL2Q6UWE3 100 aa13.05□□□□□ -0.32
SCARB2-203ENST00000502908 TRBV6-8A0A0A6YYG3 113 aa13.04□□□□□ -0.32
SCARB2-203ENST00000502908 ZNF843Q8N446 348 aa13.04□□□□□ -0.32
SCARB2-203ENST00000502908 IGHV3OR16-9A0A0B4J2B5 98 aa13.04□□□□□ -0.32
SCARB2-203ENST00000502908 FHL2Q14192 279 aa13.04□□□□□ -0.32
SCARB2-203ENST00000502908 C19orf73Q9NVV2 129 aa13.04□□□□□ -0.32
SCARB2-203ENST00000502908 RPL28P46779 137 aaKnown RBP13.03□□□□□ -0.32
SCARB2-203ENST00000502908 CSNK1G2-AS1Q8NCQ2 148 aa13.03□□□□□ -0.32
SCARB2-203ENST00000502908 LINC01006Q8NI28 216 aa13.03□□□□□ -0.32
SCARB2-203ENST00000502908 ANK3Q12955 4377 aaKnown RBP13.03□□□□□ -0.32
SCARB2-203ENST00000502908 A0A096LPF7 62 aa13.03□□□□□ -0.32
SCARB2-203ENST00000502908 MALP21145 153 aa13.03□□□□□ -0.32
SCARB2-203ENST00000502908 TMEM86BQ8N661 226 aa13.02□□□□□ -0.33
SCARB2-203ENST00000502908 LRRC75A-AS1Q8N1F1 130 aa13.01□□□□□ -0.33
SCARB2-203ENST00000502908 OR13C6PQ8NH95 151 aa13.01□□□□□ -0.33
SCARB2-203ENST00000502908 PAX4O43316 350 aa13.01□□□□□ -0.33
SCARB2-203ENST00000502908 ACYP1P07311 99 aa13.01□□□□□ -0.33
SCARB2-203ENST00000502908 XCL1P47992 114 aa13.01□□□□□ -0.33
SCARB2-203ENST00000502908 SLPIP03973 132 aa13□□□□□ -0.33
SCARB2-203ENST00000502908 DNAL4O96015 105 aa12.99□□□□□ -0.33
SCARB2-203ENST00000502908 C14orf132Q9NPU4 83 aa12.99□□□□□ -0.33
SCARB2-203ENST00000502908 IGLV1-51P01701 117 aa12.99□□□□□ -0.33
SCARB2-203ENST00000502908 ITPR2Q14571 2701 aa12.98□□□□□ -0.33
SCARB2-203ENST00000502908 OVOL2Q9BRP0 275 aa12.98□□□□□ -0.33
SCARB2-203ENST00000502908 LECT2O14960 151 aa12.98□□□□□ -0.33
SCARB2-203ENST00000502908 FAM222AQ5U5X8 452 aa12.98□□□□□ -0.33
SCARB2-203ENST00000502908 PF4P02776 101 aa12.97□□□□□ -0.33
SCARB2-203ENST00000502908 LINC00643Q86TS7 51 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms