RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 A0A0J9YWU9 116 aa12.58□□□□□ -0.4
LINC00535-201ENST00000501400 A0A0J9YXY3 114 aa12.58□□□□□ -0.4
LINC00535-201ENST00000501400 Q6ZTC4 211 aa12.58□□□□□ -0.4
LINC00535-201ENST00000501400 NDUFA12Q9UI09 145 aa12.58□□□□□ -0.4
LINC00535-201ENST00000501400 ICOSQ9Y6W8 199 aa12.58□□□□□ -0.4
LINC00535-201ENST00000501400 IGKV3OR2-268A0A0C4DH90 116 aa12.57□□□□□ -0.4
LINC00535-201ENST00000501400 KPRPQ5T749 579 aaPredicted RBP12.57□□□□□ -0.4
LINC00535-201ENST00000501400 HUWE1Q7Z6Z7 4374 aaKnown RBP12.56□□□□□ -0.4
LINC00535-201ENST00000501400 TMEM262E9PQX1 116 aa12.56□□□□□ -0.4
LINC00535-201ENST00000501400 IGHV3-30P01768 117 aa12.56□□□□□ -0.4
LINC00535-201ENST00000501400 IGHV3-30-5P0DP03 117 aa12.56□□□□□ -0.4
LINC00535-201ENST00000501400 SRSF9Q13242 221 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC00535-201ENST00000501400 Q8N3U1 123 aa12.56□□□□□ -0.4
LINC00535-201ENST00000501400 RAB37Q96AX2 223 aa12.56□□□□□ -0.4
LINC00535-201ENST00000501400 LITAFQ99732 161 aa12.56□□□□□ -0.4
LINC00535-201ENST00000501400 A0A1B0GWB2 263 aa12.54□□□□□ -0.4
LINC00535-201ENST00000501400 C9orf118A6NHY6 69 aa12.54□□□□□ -0.4
LINC00535-201ENST00000501400 SMIM13P0DJ93 91 aa12.54□□□□□ -0.4
LINC00535-201ENST00000501400 LINC00959A0A1B0GUT2 108 aa12.54□□□□□ -0.4
LINC00535-201ENST00000501400 NAA38Q9BRA0 125 aaKnown RBP12.54□□□□□ -0.4
LINC00535-201ENST00000501400 IGHV3OR16-9A0A0B4J2B5 98 aa12.53□□□□□ -0.4
LINC00535-201ENST00000501400 SH2D6Q7Z4S9 175 aa12.53□□□□□ -0.4
LINC00535-201ENST00000501400 TM2D3Q9BRN9 247 aa12.53□□□□□ -0.4
LINC00535-201ENST00000501400 NDUFA1O15239 70 aa12.52□□□□□ -0.4
LINC00535-201ENST00000501400 LELP1Q5T871 98 aa12.52□□□□□ -0.4
LINC00535-201ENST00000501400 NANOS2P60321 138 aaKnown RBP12.52□□□□□ -0.41
LINC00535-201ENST00000501400 CLPSL2Q6UWE3 100 aa12.52□□□□□ -0.41
LINC00535-201ENST00000501400 TMEM238C9JI98 176 aa12.51□□□□□ -0.41
LINC00535-201ENST00000501400 H3BNG1 76 aa12.51□□□□□ -0.41
LINC00535-201ENST00000501400 H3BUT2 72 aa12.51□□□□□ -0.41
LINC00535-201ENST00000501400 SPATA25Q9BR10 227 aa12.5□□□□□ -0.41
LINC00535-201ENST00000501400 VAMP3Q15836 100 aa12.5□□□□□ -0.41
LINC00535-201ENST00000501400 ADAMTSL4-AS1Q5T5F5 129 aa12.49□□□□□ -0.41
LINC00535-201ENST00000501400 ZNF625Q96I27 306 aaPredicted RBP12.49□□□□□ -0.41
LINC00535-201ENST00000501400 Q9H8V8 135 aa12.49□□□□□ -0.41
LINC00535-201ENST00000501400 TMEM238LA0A1B0GVL6 79 aa12.49□□□□□ -0.41
LINC00535-201ENST00000501400 A6NJY4 79 aa12.49□□□□□ -0.41
LINC00535-201ENST00000501400 LYPD5Q6UWN5 251 aa12.49□□□□□ -0.41
LINC00535-201ENST00000501400 C11orf45Q8TAV5 145 aa12.49□□□□□ -0.41
LINC00535-201ENST00000501400 A0A087WZ39 114 aa12.48□□□□□ -0.41
LINC00535-201ENST00000501400 LINC00269Q8N2A0 174 aa12.48□□□□□ -0.41
LINC00535-201ENST00000501400 MRAPQ8TCY5 172 aa12.48□□□□□ -0.41
LINC00535-201ENST00000501400 CCL25O15444 150 aa12.47□□□□□ -0.41
LINC00535-201ENST00000501400 UBE2V1Q13404 147 aa12.47□□□□□ -0.41
LINC00535-201ENST00000501400 SPANXDQ9BXN6 97 aa12.47□□□□□ -0.41
LINC00535-201ENST00000501400 SPANXCQ9NY87 97 aa12.47□□□□□ -0.41
LINC00535-201ENST00000501400 DEFB121Q5J5C9 76 aa12.47□□□□□ -0.41
LINC00535-201ENST00000501400 A0A1W2PPM0 123 aa12.46□□□□□ -0.42
LINC00535-201ENST00000501400 TIMM17BO60830 172 aa12.46□□□□□ -0.42
LINC00535-201ENST00000501400 ANGP03950 147 aaKnown RBP12.46□□□□□ -0.42
LINC00535-201ENST00000501400 XCL1P47992 114 aa12.46□□□□□ -0.42
LINC00535-201ENST00000501400 C5orf38Q86SI9 138 aa12.46□□□□□ -0.42
LINC00535-201ENST00000501400 MUSTN1Q8IVN3 82 aa12.46□□□□□ -0.42
LINC00535-201ENST00000501400 DEFB131BA0A096LNP1 70 aa12.45□□□□□ -0.42
LINC00535-201ENST00000501400 IGLL5B9A064 214 aa12.45□□□□□ -0.42
LINC00535-201ENST00000501400 EIF4EBP3O60516 100 aaPredicted RBP12.45□□□□□ -0.42
LINC00535-201ENST00000501400 SS18Q15532 418 aa12.45□□□□□ -0.42
LINC00535-201ENST00000501400 MIAQ16674 131 aa12.45□□□□□ -0.42
LINC00535-201ENST00000501400 A4D1N5 150 aa12.44□□□□□ -0.42
LINC00535-201ENST00000501400 CFC1BP0CG36 223 aa12.44□□□□□ -0.42
LINC00535-201ENST00000501400 CFC1P0CG37 223 aa12.44□□□□□ -0.42
LINC00535-201ENST00000501400 REG3AQ06141 175 aa12.44□□□□□ -0.42
LINC00535-201ENST00000501400 COX7B2Q8TF08 81 aa12.44□□□□□ -0.42
LINC00535-201ENST00000501400 APOMO95445 188 aa12.43□□□□□ -0.42
LINC00535-201ENST00000501400 DNAH9Q9NYC9 4486 aa12.42□□□□□ -0.42
LINC00535-201ENST00000501400 DAND5Q8N907 189 aa12.42□□□□□ -0.42
LINC00535-201ENST00000501400 RPL24P83731 157 aaKnown RBP12.41□□□□□ -0.42
LINC00535-201ENST00000501400 TOMM7Q9P0U1 55 aa12.41□□□□□ -0.42
LINC00535-201ENST00000501400 IGLV10-54A0A075B6I4 117 aa12.41□□□□□ -0.42
LINC00535-201ENST00000501400 WFDC10BQ8IUB3 73 aa12.41□□□□□ -0.42
LINC00535-201ENST00000501400 CHCHD10Q8WYQ3 142 aaPredicted RBP12.41□□□□□ -0.42
LINC00535-201ENST00000501400 PRR34Q9NV39 138 aa12.41□□□□□ -0.42
LINC00535-201ENST00000501400 PGPEP1Q9NXJ5 209 aa12.41□□□□□ -0.42
LINC00535-201ENST00000501400 HERV-K104P63124 156 aa12.4□□□□□ -0.42
LINC00535-201ENST00000501400 K7EP34 96 aa12.39□□□□□ -0.43
LINC00535-201ENST00000501400 TSPAN13O95857 204 aa12.39□□□□□ -0.43
LINC00535-201ENST00000501400 PRSS2P07478 247 aa12.39□□□□□ -0.43
LINC00535-201ENST00000501400 NPC2P61916 151 aa12.39□□□□□ -0.43
LINC00535-201ENST00000501400 CD164L2Q6UWJ8 174 aa12.39□□□□□ -0.43
LINC00535-201ENST00000501400 FABP2P12104 132 aa12.39□□□□□ -0.43
LINC00535-201ENST00000501400 ESRGQ1W209 222 aa12.39□□□□□ -0.43
LINC00535-201ENST00000501400 KLK12Q9UKR0 248 aa12.39□□□□□ -0.43
LINC00535-201ENST00000501400 COL7A1Q02388 2944 aa12.38□□□□□ -0.43
LINC00535-201ENST00000501400 LINC01561Q8N1V8 128 aa12.38□□□□□ -0.43
LINC00535-201ENST00000501400 SPCS1Q9Y6A9 102 aa12.38□□□□□ -0.43
LINC00535-201ENST00000501400 A0A0B4J2C4 111 aa12.37□□□□□ -0.43
LINC00535-201ENST00000501400 A0A0U1RRA0 63 aa12.37□□□□□ -0.43
LINC00535-201ENST00000501400 GAGE10A6NGK3 116 aa12.37□□□□□ -0.43
LINC00535-201ENST00000501400 IGHV3-33P01772 117 aa12.37□□□□□ -0.43
LINC00535-201ENST00000501400 FOXI1Q12951 378 aa12.37□□□□□ -0.43
LINC00535-201ENST00000501400 CIRBPQ14011 172 aaKnown RBP12.37□□□□□ -0.43
LINC00535-201ENST00000501400 MEIG1Q5JSS6 88 aa12.37□□□□□ -0.43
LINC00535-201ENST00000501400 ENHOQ6UWT2 76 aa12.37□□□□□ -0.43
LINC00535-201ENST00000501400 TRAV10A0A0B4J240 114 aa12.36□□□□□ -0.43
LINC00535-201ENST00000501400 IFITM1P13164 125 aa12.35□□□□□ -0.43
LINC00535-201ENST00000501400 SOSTDC1Q6X4U4 206 aa12.35□□□□□ -0.43
LINC00535-201ENST00000501400 LINC00308Q8TCZ7 52 aa12.35□□□□□ -0.43
LINC00535-201ENST00000501400 PRO1854Q9UHT4 67 aa12.35□□□□□ -0.43
LINC00535-201ENST00000501400 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.35□□□□□ -0.43
LINC00535-201ENST00000501400 COX7A2LO14548 114 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms