RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 BOD1L2Q8IYS8 172 aa10.99□□□□□ -0.65
LMNA-217ENST00000498722 C6orf223Q8N319 242 aa10.99□□□□□ -0.65
LMNA-217ENST00000498722 KRTAP1-5Q9BYS1 174 aa10.99□□□□□ -0.65
LMNA-217ENST00000498722 CDC42SE2Q9NRR3 84 aa10.99□□□□□ -0.65
LMNA-217ENST00000498722 A0A0J9YXV3 536 aa10.98□□□□□ -0.65
LMNA-217ENST00000498722 RTL8CO15255 209 aa10.98□□□□□ -0.65
LMNA-217ENST00000498722 UBE2D1P51668 147 aa10.98□□□□□ -0.65
LMNA-217ENST00000498722 TIRAPP58753 221 aa10.98□□□□□ -0.65
LMNA-217ENST00000498722 RNASE13Q5GAN3 156 aaKnown RBP10.98□□□□□ -0.65
LMNA-217ENST00000498722 LELP1Q5T871 98 aa10.97□□□□□ -0.65
LMNA-217ENST00000498722 FAM19A3Q7Z5A8 133 aa10.97□□□□□ -0.65
LMNA-217ENST00000498722 IGKV2D-26A0A0A0MRZ7 120 aa10.96□□□□□ -0.65
LMNA-217ENST00000498722 A0A1B0GUV1 79 aa10.96□□□□□ -0.65
LMNA-217ENST00000498722 ZNF22P17026 224 aaPredicted RBP10.96□□□□□ -0.65
LMNA-217ENST00000498722 GEMIN7Q9H840 131 aaKnown RBP10.96□□□□□ -0.65
LMNA-217ENST00000498722 TMEM223A0PJW6 202 aa10.95□□□□□ -0.66
LMNA-217ENST00000498722 HERVK_113P63121 156 aa10.95□□□□□ -0.66
LMNA-217ENST00000498722 CTAG1AP78358 180 aa10.95□□□□□ -0.66
LMNA-217ENST00000498722 FRAS1Q86XX4 4008 aa10.95□□□□□ -0.66
LMNA-217ENST00000498722 TMEM262E9PQX1 116 aa10.94□□□□□ -0.66
LMNA-217ENST00000498722 IGHV3-30P01768 117 aa10.94□□□□□ -0.66
LMNA-217ENST00000498722 IGHV3-33P01772 117 aa10.94□□□□□ -0.66
LMNA-217ENST00000498722 DNAH10OSP0CZ25 163 aa10.94□□□□□ -0.66
LMNA-217ENST00000498722 IGHV3-30-3P0DP02 117 aa10.94□□□□□ -0.66
LMNA-217ENST00000498722 IGHV3-30-5P0DP03 117 aa10.94□□□□□ -0.66
LMNA-217ENST00000498722 PCP2Q8IVA1 136 aa10.94□□□□□ -0.66
LMNA-217ENST00000498722 H3BRM9 83 aa10.93□□□□□ -0.66
LMNA-217ENST00000498722 M0R143 59 aa10.93□□□□□ -0.66
LMNA-217ENST00000498722 LEPROTO15243 131 aa10.92□□□□□ -0.66
LMNA-217ENST00000498722 C10orf126Q8N4M7 172 aa10.92□□□□□ -0.66
LMNA-217ENST00000498722 PLEKHB2Q96CS7 222 aa10.92□□□□□ -0.66
LMNA-217ENST00000498722 DNAH10Q8IVF4 4471 aa10.91□□□□□ -0.66
LMNA-217ENST00000498722 IGLV4-60A0A075B6I1 120 aa10.91□□□□□ -0.66
LMNA-217ENST00000498722 IGLV5-45A0A087WSX0 123 aa10.91□□□□□ -0.66
LMNA-217ENST00000498722 LINC01556Q5JQF7 62 aa10.91□□□□□ -0.66
LMNA-217ENST00000498722 LINC00469Q8N7U9 141 aa10.91□□□□□ -0.66
LMNA-217ENST00000498722 HIGD1BQ9P298 99 aa10.91□□□□□ -0.66
LMNA-217ENST00000498722 TRAV13-1A0A0B4J241 112 aa10.9□□□□□ -0.66
LMNA-217ENST00000498722 MYMXA0A1B0GTQ4 84 aa10.9□□□□□ -0.66
LMNA-217ENST00000498722 K7EP13 123 aa10.9□□□□□ -0.66
LMNA-217ENST00000498722 LGALS3P17931 250 aaKnown RBP10.9□□□□□ -0.66
LMNA-217ENST00000498722 RBX1P62877 108 aa10.9□□□□□ -0.66
LMNA-217ENST00000498722 LBHQ53QV2 105 aaPredicted RBP10.9□□□□□ -0.66
LMNA-217ENST00000498722 LINC00242Q5T6M2 205 aa10.9□□□□□ -0.66
LMNA-217ENST00000498722 C2orf91Q6ZV80 131 aa10.9□□□□□ -0.66
LMNA-217ENST00000498722 CCL25O15444 150 aa10.89□□□□□ -0.67
LMNA-217ENST00000498722 MPV17L2Q567V2 206 aa10.89□□□□□ -0.67
LMNA-217ENST00000498722 TP73-AS1Q9UF72 201 aa10.89□□□□□ -0.67
LMNA-217ENST00000498722 IGHV1-58A0A0C4DH39 117 aa10.88□□□□□ -0.67
LMNA-217ENST00000498722 ZNF815PA8K554 130 aa10.88□□□□□ -0.67
LMNA-217ENST00000498722 J3QQQ9 107 aa10.88□□□□□ -0.67
LMNA-217ENST00000498722 TNP2Q05952 138 aa10.88□□□□□ -0.67
LMNA-217ENST00000498722 Q8N3U1 123 aa10.88□□□□□ -0.67
LMNA-217ENST00000498722 MAPKAPK5-AS1Q8N8E1 139 aa10.88□□□□□ -0.67
LMNA-217ENST00000498722 SNHG12Q9BXW3 62 aa10.87□□□□□ -0.67
LMNA-217ENST00000498722 TTTY13Q9BZ97 58 aa10.87□□□□□ -0.67
LMNA-217ENST00000498722 Q9HAA7 133 aa10.87□□□□□ -0.67
LMNA-217ENST00000498722 CDKN2A-AS1Q9UH64 79 aa10.87□□□□□ -0.67
LMNA-217ENST00000498722 COX6A2Q02221 97 aa10.86□□□□□ -0.67
LMNA-217ENST00000498722 HSD52Q0P140 79 aa10.86□□□□□ -0.67
LMNA-217ENST00000498722 SS18Q15532 418 aa10.86□□□□□ -0.67
LMNA-217ENST00000498722 DNAH2Q9P225 4427 aa10.85□□□□□ -0.67
LMNA-217ENST00000498722 LINC00959A0A1B0GUT2 108 aa10.85□□□□□ -0.67
LMNA-217ENST00000498722 IGKV3OR2-268A0A0C4DH90 116 aa10.84□□□□□ -0.67
LMNA-217ENST00000498722 EREGO14944 169 aa10.84□□□□□ -0.67
LMNA-217ENST00000498722 SPINK8P0C7L1 97 aa10.84□□□□□ -0.67
LMNA-217ENST00000498722 HINT1P49773 126 aaPredicted RBP10.84□□□□□ -0.67
LMNA-217ENST00000498722 TAL2Q16559 108 aa10.84□□□□□ -0.67
LMNA-217ENST00000498722 IGHV3-64A0A075B6Q5 118 aa10.84□□□□□ -0.67
LMNA-217ENST00000498722 A0A1B0GVY2 172 aa10.84□□□□□ -0.67
LMNA-217ENST00000498722 IBA57-AS1B1ANH7 110 aa10.84□□□□□ -0.67
LMNA-217ENST00000498722 PSCAO43653 123 aa10.84□□□□□ -0.67
LMNA-217ENST00000498722 ANGP03950 147 aaKnown RBP10.84□□□□□ -0.67
LMNA-217ENST00000498722 TSPEAR-AS2P59090 65 aa10.84□□□□□ -0.67
LMNA-217ENST00000498722 BATFQ16520 125 aa10.84□□□□□ -0.67
LMNA-217ENST00000498722 SCGB1D4Q6XE38 83 aa10.84□□□□□ -0.67
LMNA-217ENST00000498722 TRAV8-3A0A0A6YYJ7 113 aa10.83□□□□□ -0.68
LMNA-217ENST00000498722 Q6ZRN7 208 aaPredicted RBP10.83□□□□□ -0.68
LMNA-217ENST00000498722 REG3AQ06141 175 aa10.82□□□□□ -0.68
LMNA-217ENST00000498722 BVES-AS1Q5T3Y7 98 aa10.82□□□□□ -0.68
LMNA-217ENST00000498722 KLK12Q9UKR0 248 aa10.82□□□□□ -0.68
LMNA-217ENST00000498722 DNAH17Q9UFH2 4485 aa10.81□□□□□ -0.68
LMNA-217ENST00000498722 IGLV5-39A0A0G2JS06 123 aa10.81□□□□□ -0.68
LMNA-217ENST00000498722 SMIM1B2RUZ4 78 aa10.81□□□□□ -0.68
LMNA-217ENST00000498722 LINC01561Q8N1V8 128 aa10.81□□□□□ -0.68
LMNA-217ENST00000498722 LINC00269Q8N2A0 174 aa10.81□□□□□ -0.68
LMNA-217ENST00000498722 COL5A1-AS1Q5SY13 56 aa10.8□□□□□ -0.68
LMNA-217ENST00000498722 HECTD4Q9Y4D8 3996 aa10.79□□□□□ -0.68
LMNA-217ENST00000498722 IGHV3OR16-9A0A0B4J2B5 98 aa10.79□□□□□ -0.68
LMNA-217ENST00000498722 ORAOV1Q8WV07 137 aa10.79□□□□□ -0.68
LMNA-217ENST00000498722 UBE2WQ96B02 151 aa10.79□□□□□ -0.68
LMNA-217ENST00000498722 HIST1H4GQ99525 98 aa10.79□□□□□ -0.68
LMNA-217ENST00000498722 NDUFA12Q9UI09 145 aa10.79□□□□□ -0.68
LMNA-217ENST00000498722 FAT2Q9NYQ8 4349 aa10.79□□□□□ -0.68
LMNA-217ENST00000498722 A0A087WZ39 114 aa10.78□□□□□ -0.68
LMNA-217ENST00000498722 CRPP02741 224 aa10.78□□□□□ -0.68
LMNA-217ENST00000498722 CLPSL2Q6UWE3 100 aa10.78□□□□□ -0.68
LMNA-217ENST00000498722 TM2D2Q9BX73 214 aa10.78□□□□□ -0.68
LMNA-217ENST00000498722 SPANXB1Q9NS25 103 aaPredicted RBP10.78□□□□□ -0.68
LMNA-217ENST00000498722 NDUFA1O15239 70 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms