RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 Q6ZTI0 123 aa14.07□□□□□ -0.16
NKX2-1-202ENST00000498187 CCL24O00175 119 aa14.07□□□□□ -0.16
NKX2-1-202ENST00000498187 RPL36AP83881 106 aaKnown RBP14.07□□□□□ -0.16
NKX2-1-202ENST00000498187 PRIMA1Q86XR5 153 aa14.07□□□□□ -0.16
NKX2-1-202ENST00000498187 RPL36ALQ969Q0 106 aaKnown RBP14.07□□□□□ -0.16
NKX2-1-202ENST00000498187 TLN2Q9Y4G6 2542 aa14.06□□□□□ -0.16
NKX2-1-202ENST00000498187 K7EQD1 137 aa14.06□□□□□ -0.16
NKX2-1-202ENST00000498187 HERV-K104P63124 156 aa14.06□□□□□ -0.16
NKX2-1-202ENST00000498187 UNC79Q9P2D8 2635 aa14.06□□□□□ -0.16
NKX2-1-202ENST00000498187 TRAV13-1A0A0B4J241 112 aa14.06□□□□□ -0.16
NKX2-1-202ENST00000498187 NDUFA7O95182 113 aa14.06□□□□□ -0.16
NKX2-1-202ENST00000498187 SOSTDC1Q6X4U4 206 aa14.06□□□□□ -0.16
NKX2-1-202ENST00000498187 TRBV10-1A0A0K0K1A3 114 aa14.05□□□□□ -0.16
NKX2-1-202ENST00000498187 TRACP01848 142 aa14.05□□□□□ -0.16
NKX2-1-202ENST00000498187 DAZ2Q13117 558 aaKnown RBP14.05□□□□□ -0.16
NKX2-1-202ENST00000498187 DAZ4Q86SG3 579 aaKnown RBP14.05□□□□□ -0.16
NKX2-1-202ENST00000498187 DAZ3Q9NR90 486 aaKnown RBP14.05□□□□□ -0.16
NKX2-1-202ENST00000498187 ZNF469Q96JG9 3925 aaPredicted RBP14.05□□□□□ -0.16
NKX2-1-202ENST00000498187 NTM-AS1Q6ZSK4 140 aa14.04□□□□□ -0.16
NKX2-1-202ENST00000498187 AKAP9Q99996 3911 aa14.04□□□□□ -0.16
NKX2-1-202ENST00000498187 CCDC168Q8NDH2 2452 aa14.04□□□□□ -0.16
NKX2-1-202ENST00000498187 IMUPQ9GZP8 106 aa14.04□□□□□ -0.16
NKX2-1-202ENST00000498187 PPDPFQ9H3Y8 114 aa14.04□□□□□ -0.16
NKX2-1-202ENST00000498187 ESM1Q9NQ30 184 aa14.02□□□□□ -0.16
NKX2-1-202ENST00000498187 SONP18583 2426 aaKnown RBP14.02□□□□□ -0.16
NKX2-1-202ENST00000498187 WFDC11Q8NEX6 87 aa14.02□□□□□ -0.17
NKX2-1-202ENST00000498187 CDC42SE2Q9NRR3 84 aa14.02□□□□□ -0.17
NKX2-1-202ENST00000498187 F5H768 121 aa14.01□□□□□ -0.17
NKX2-1-202ENST00000498187 NOP10Q9NPE3 64 aaKnown RBP14.01□□□□□ -0.17
NKX2-1-202ENST00000498187 BAALC-AS2P0C853 105 aa13.99□□□□□ -0.17
NKX2-1-202ENST00000498187 PF4P02776 101 aa13.99□□□□□ -0.17
NKX2-1-202ENST00000498187 CHCHD5Q9BSY4 110 aa13.99□□□□□ -0.17
NKX2-1-202ENST00000498187 PDZD2O15018 2839 aa13.98□□□□□ -0.17
NKX2-1-202ENST00000498187 LINC00643Q86TS7 51 aa13.98□□□□□ -0.17
NKX2-1-202ENST00000498187 ITPR3Q14573 2671 aa13.97□□□□□ -0.17
NKX2-1-202ENST00000498187 TRAV13-2A0A0B4J235 113 aa13.97□□□□□ -0.17
NKX2-1-202ENST00000498187 GIG44P09565 113 aaPredicted RBP13.97□□□□□ -0.17
NKX2-1-202ENST00000498187 FAM222AQ5U5X8 452 aa13.97□□□□□ -0.17
NKX2-1-202ENST00000498187 WFDC10AQ9H1F0 79 aa13.97□□□□□ -0.17
NKX2-1-202ENST00000498187 UBE2L6O14933 153 aa13.96□□□□□ -0.17
NKX2-1-202ENST00000498187 PLAC8L1A1L4L8 177 aa13.95□□□□□ -0.18
NKX2-1-202ENST00000498187 INAFM2P0DMQ5 153 aa13.95□□□□□ -0.18
NKX2-1-202ENST00000498187 TMEM243Q9BU79 118 aa13.95□□□□□ -0.18
NKX2-1-202ENST00000498187 NOTCH2Q04721 2471 aa13.94□□□□□ -0.18
NKX2-1-202ENST00000498187 FAM236AA0A1B0GUQ0 79 aa13.94□□□□□ -0.18
NKX2-1-202ENST00000498187 FAM236BA0A1B0GV22 79 aa13.94□□□□□ -0.18
NKX2-1-202ENST00000498187 RPL28P46779 137 aaKnown RBP13.94□□□□□ -0.18
NKX2-1-202ENST00000498187 C16orf74Q96GX8 76 aa13.94□□□□□ -0.18
NKX2-1-202ENST00000498187 TRGV2A0A075B6R0 118 aa13.93□□□□□ -0.18
NKX2-1-202ENST00000498187 RPL35AP18077 110 aaKnown RBP13.93□□□□□ -0.18
NKX2-1-202ENST00000498187 FAM218AQ96MZ4 157 aa13.93□□□□□ -0.18
NKX2-1-202ENST00000498187 NOTCH3Q9UM47 2321 aa13.93□□□□□ -0.18
NKX2-1-202ENST00000498187 LOC100131303A0A0U1RQF7 123 aa13.93□□□□□ -0.18
NKX2-1-202ENST00000498187 CRPP02741 224 aa13.93□□□□□ -0.18
NKX2-1-202ENST00000498187 SDIM1Q6ZPB5 146 aa13.93□□□□□ -0.18
NKX2-1-202ENST00000498187 SMCR5Q8TEV8 140 aa13.93□□□□□ -0.18
NKX2-1-202ENST00000498187 LINC01006Q8NI28 216 aa13.92□□□□□ -0.18
NKX2-1-202ENST00000498187 CMC4P56277 68 aaPredicted RBP13.92□□□□□ -0.18
NKX2-1-202ENST00000498187 OVOL2Q9BRP0 275 aa13.91□□□□□ -0.18
NKX2-1-202ENST00000498187 NF1P21359 2839 aa13.91□□□□□ -0.18
NKX2-1-202ENST00000498187 COX7B2Q8TF08 81 aa13.91□□□□□ -0.18
NKX2-1-202ENST00000498187 FAM110AQ9BQ89 295 aa13.91□□□□□ -0.18
NKX2-1-202ENST00000498187 C22orf24Q9Y442 160 aa13.91□□□□□ -0.18
NKX2-1-202ENST00000498187 CUBNO60494 3623 aa13.9□□□□□ -0.18
NKX2-1-202ENST00000498187 MALP21145 153 aa13.9□□□□□ -0.18
NKX2-1-202ENST00000498187 MIR7-3HGQ8N6C7 128 aa13.89□□□□□ -0.19
NKX2-1-202ENST00000498187 TMEM126AQ9H061 195 aa13.89□□□□□ -0.19
NKX2-1-202ENST00000498187 C19orf73Q9NVV2 129 aa13.89□□□□□ -0.19
NKX2-1-202ENST00000498187 TRBV6-4A0A1B0GX49 114 aa13.89□□□□□ -0.19
NKX2-1-202ENST00000498187 SND1-IT1Q9HBX3 110 aa13.89□□□□□ -0.19
NKX2-1-202ENST00000498187 IGLV1-51P01701 117 aa13.88□□□□□ -0.19
NKX2-1-202ENST00000498187 CXCL5P42830 114 aa13.88□□□□□ -0.19
NKX2-1-202ENST00000498187 C2CD3Q4AC94 2353 aa13.88□□□□□ -0.19
NKX2-1-202ENST00000498187 FLNAP21333 2647 aaKnown RBP13.87□□□□□ -0.19
NKX2-1-202ENST00000498187 TRGV4A0A0C4DH28 118 aa13.87□□□□□ -0.19
NKX2-1-202ENST00000498187 ATP5G1P05496 136 aa13.87□□□□□ -0.19
NKX2-1-202ENST00000498187 Q9HAA7 133 aa13.87□□□□□ -0.19
NKX2-1-202ENST00000498187 JMJD1CQ15652 2540 aa13.87□□□□□ -0.19
NKX2-1-202ENST00000498187 SMIM20Q8N5G0 67 aa13.87□□□□□ -0.19
NKX2-1-202ENST00000498187 LINC00337Q8N6G1 96 aa13.87□□□□□ -0.19
NKX2-1-202ENST00000498187 CSNK1G2-AS1Q8NCQ2 148 aa13.87□□□□□ -0.19
NKX2-1-202ENST00000498187 GAGE2AQ6NT46 116 aa13.86□□□□□ -0.19
NKX2-1-202ENST00000498187 C16orf95Q9H693 158 aa13.86□□□□□ -0.19
NKX2-1-202ENST00000498187 SETXQ7Z333 2677 aaKnown RBP13.86□□□□□ -0.19
NKX2-1-202ENST00000498187 DNAL4O96015 105 aa13.86□□□□□ -0.19
NKX2-1-202ENST00000498187 TOMM7Q9P0U1 55 aa13.86□□□□□ -0.19
NKX2-1-202ENST00000498187 IGKV2-28A0A075B6P5 120 aa13.85□□□□□ -0.19
NKX2-1-202ENST00000498187 IGKV2D-28P01615 120 aa13.85□□□□□ -0.19
NKX2-1-202ENST00000498187 RNASE1P07998 156 aaKnown RBP13.85□□□□□ -0.19
NKX2-1-202ENST00000498187 KRTAP1-1Q07627 177 aa13.85□□□□□ -0.19
NKX2-1-202ENST00000498187 IGKV3OR2-268A0A0C4DH90 116 aa13.85□□□□□ -0.19
NKX2-1-202ENST00000498187 LINC00158P58513 81 aa13.85□□□□□ -0.19
NKX2-1-202ENST00000498187 H0YGX0 51 aa13.84□□□□□ -0.19
NKX2-1-202ENST00000498187 SETD2Q9BYW2 2564 aaPredicted RBP13.84□□□□□ -0.19
NKX2-1-202ENST00000498187 ACANP16112 2415 aa13.84□□□□□ -0.19
NKX2-1-202ENST00000498187 FLNBO75369 2602 aaKnown RBP13.84□□□□□ -0.19
NKX2-1-202ENST00000498187 C5orf38Q86SI9 138 aa13.84□□□□□ -0.19
NKX2-1-202ENST00000498187 SMIM11BQ8TCY0 68 aa13.82□□□□□ -0.2
NKX2-1-202ENST00000498187 IGLV4-60A0A075B6I1 120 aa13.82□□□□□ -0.2
NKX2-1-202ENST00000498187 FHL2Q14192 279 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms