RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 FAM19A3Q7Z5A8 133 aa13.65□□□□□ -0.22
ACTN4-208ENST00000497637 HIGD1BQ9P298 99 aa13.65□□□□□ -0.22
ACTN4-208ENST00000497637 TRAV8-6A0A0B4J262 113 aa13.64□□□□□ -0.23
ACTN4-208ENST00000497637 MRPL23Q16540 153 aaKnown RBP13.64□□□□□ -0.23
ACTN4-208ENST00000497637 CHCHD5Q9BSY4 110 aa13.64□□□□□ -0.23
ACTN4-208ENST00000497637 TTTY13Q9BZ97 58 aa13.64□□□□□ -0.23
ACTN4-208ENST00000497637 HTN3P15516 51 aa13.63□□□□□ -0.23
ACTN4-208ENST00000497637 MYMXA0A1B0GTQ4 84 aa13.62□□□□□ -0.23
ACTN4-208ENST00000497637 HERC1Q15751 4861 aa13.62□□□□□ -0.23
ACTN4-208ENST00000497637 DNAH6Q9C0G6 4158 aa13.62□□□□□ -0.23
ACTN4-208ENST00000497637 FAT2Q9NYQ8 4349 aa13.61□□□□□ -0.23
ACTN4-208ENST00000497637 LEPROTO15243 131 aa13.61□□□□□ -0.23
ACTN4-208ENST00000497637 HINT1P49773 126 aaPredicted RBP13.61□□□□□ -0.23
ACTN4-208ENST00000497637 SEC11AP67812 179 aa13.61□□□□□ -0.23
ACTN4-208ENST00000497637 ICOSQ9Y6W8 199 aa13.61□□□□□ -0.23
ACTN4-208ENST00000497637 DNAH11Q96DT5 4516 aa13.6□□□□□ -0.23
ACTN4-208ENST00000497637 IGLV5-45A0A087WSX0 123 aa13.6□□□□□ -0.23
ACTN4-208ENST00000497637 H3BNG1 76 aa13.6□□□□□ -0.23
ACTN4-208ENST00000497637 PLEKHB2Q96CS7 222 aa13.6□□□□□ -0.23
ACTN4-208ENST00000497637 GEMIN7Q9H840 131 aaKnown RBP13.6□□□□□ -0.23
ACTN4-208ENST00000497637 HSD52Q0P140 79 aa13.59□□□□□ -0.23
ACTN4-208ENST00000497637 BATFQ16520 125 aa13.59□□□□□ -0.23
ACTN4-208ENST00000497637 MPV17L2Q567V2 206 aa13.59□□□□□ -0.23
ACTN4-208ENST00000497637 DYNC1H1Q14204 4646 aaKnown RBP13.59□□□□□ -0.23
ACTN4-208ENST00000497637 A0A096LPF7 62 aa13.58□□□□□ -0.24
ACTN4-208ENST00000497637 A0A1B0GUV1 79 aa13.58□□□□□ -0.24
ACTN4-208ENST00000497637 HERVK_113P63121 156 aa13.58□□□□□ -0.24
ACTN4-208ENST00000497637 BVES-AS1Q5T3Y7 98 aa13.58□□□□□ -0.24
ACTN4-208ENST00000497637 LINC00242Q5T6M2 205 aa13.58□□□□□ -0.24
ACTN4-208ENST00000497637 DNAH2Q9P225 4427 aa13.58□□□□□ -0.24
ACTN4-208ENST00000497637 COL5A1-AS1Q5SY13 56 aa13.57□□□□□ -0.24
ACTN4-208ENST00000497637 LINC00469Q8N7U9 141 aa13.57□□□□□ -0.24
ACTN4-208ENST00000497637 IGLV4-60A0A075B6I1 120 aa13.56□□□□□ -0.24
ACTN4-208ENST00000497637 ZNF815PA8K554 130 aa13.56□□□□□ -0.24
ACTN4-208ENST00000497637 H3BRM9 83 aa13.56□□□□□ -0.24
ACTN4-208ENST00000497637 J3QQQ9 107 aa13.56□□□□□ -0.24
ACTN4-208ENST00000497637 TRAV13-1A0A0B4J241 112 aa13.55□□□□□ -0.24
ACTN4-208ENST00000497637 IGHV1-58A0A0C4DH39 117 aa13.55□□□□□ -0.24
ACTN4-208ENST00000497637 LGALS3P17931 250 aaKnown RBP13.55□□□□□ -0.24
ACTN4-208ENST00000497637 TSPEAR-AS2P59090 65 aa13.55□□□□□ -0.24
ACTN4-208ENST00000497637 COX6A2Q02221 97 aa13.55□□□□□ -0.24
ACTN4-208ENST00000497637 Q6ZTC4 211 aa13.55□□□□□ -0.24
ACTN4-208ENST00000497637 C11orf45Q8TAV5 145 aa13.55□□□□□ -0.24
ACTN4-208ENST00000497637 RBX1P62877 108 aa13.54□□□□□ -0.24
ACTN4-208ENST00000497637 TAL2Q16559 108 aa13.54□□□□□ -0.24
ACTN4-208ENST00000497637 LELP1Q5T871 98 aa13.54□□□□□ -0.24
ACTN4-208ENST00000497637 TMEM262E9PQX1 116 aa13.53□□□□□ -0.24
ACTN4-208ENST00000497637 NANOS2P60321 138 aaKnown RBP13.53□□□□□ -0.24
ACTN4-208ENST00000497637 CDKN2A-AS1Q9UH64 79 aa13.53□□□□□ -0.24
ACTN4-208ENST00000497637 IGHV3-30-3P0DP02 117 aa13.52□□□□□ -0.25
ACTN4-208ENST00000497637 HSPG2P98160 4391 aa13.52□□□□□ -0.25
ACTN4-208ENST00000497637 ORAOV1Q8WV07 137 aa13.51□□□□□ -0.25
ACTN4-208ENST00000497637 DNAH17Q9UFH2 4485 aa13.51□□□□□ -0.25
ACTN4-208ENST00000497637 IGHV3-64A0A075B6Q5 118 aa13.5□□□□□ -0.25
ACTN4-208ENST00000497637 SPINK8P0C7L1 97 aa13.5□□□□□ -0.25
ACTN4-208ENST00000497637 DEFB131BA0A096LNP1 70 aa13.49□□□□□ -0.25
ACTN4-208ENST00000497637 TRAV8-3A0A0A6YYJ7 113 aa13.49□□□□□ -0.25
ACTN4-208ENST00000497637 IGLV5-39A0A0G2JS06 123 aa13.49□□□□□ -0.25
ACTN4-208ENST00000497637 LYPD5Q6UWN5 251 aa13.49□□□□□ -0.25
ACTN4-208ENST00000497637 DMBT1Q9UGM3 2413 aaPredicted RBP13.49□□□□□ -0.25
ACTN4-208ENST00000497637 APLNQ9ULZ1 77 aa13.48□□□□□ -0.25
ACTN4-208ENST00000497637 LINC00959A0A1B0GUT2 108 aa13.47□□□□□ -0.25
ACTN4-208ENST00000497637 RTL8CO15255 209 aa13.47□□□□□ -0.25
ACTN4-208ENST00000497637 CCL25O15444 150 aa13.47□□□□□ -0.25
ACTN4-208ENST00000497637 CDK2AP2O75956 126 aa13.47□□□□□ -0.25
ACTN4-208ENST00000497637 SCGB1D4Q6XE38 83 aa13.47□□□□□ -0.25
ACTN4-208ENST00000497637 TM2D2Q9BX73 214 aa13.47□□□□□ -0.25
ACTN4-208ENST00000497637 PKD1P98161 4303 aa13.46□□□□□ -0.25
ACTN4-208ENST00000497637 A0A1B0GV90 55 aa13.46□□□□□ -0.25
ACTN4-208ENST00000497637 CEND1Q8N111 149 aa13.46□□□□□ -0.25
ACTN4-208ENST00000497637 TRAV10A0A0B4J240 114 aa13.45□□□□□ -0.26
ACTN4-208ENST00000497637 SMIM1B2RUZ4 78 aa13.45□□□□□ -0.26
ACTN4-208ENST00000497637 IGLL5B9A064 214 aa13.45□□□□□ -0.26
ACTN4-208ENST00000497637 HIST1H4GQ99525 98 aa13.45□□□□□ -0.26
ACTN4-208ENST00000497637 SPANXB1Q9NS25 103 aaPredicted RBP13.45□□□□□ -0.26
ACTN4-208ENST00000497637 IGKV3OR2-268A0A0C4DH90 116 aa13.44□□□□□ -0.26
ACTN4-208ENST00000497637 GCSHP23434 173 aa13.44□□□□□ -0.26
ACTN4-208ENST00000497637 SS18Q15532 418 aa13.44□□□□□ -0.26
ACTN4-208ENST00000497637 NDUFA12Q9UI09 145 aa13.44□□□□□ -0.26
ACTN4-208ENST00000497637 IGHV3OR16-9A0A0B4J2B5 98 aa13.43□□□□□ -0.26
ACTN4-208ENST00000497637 A6NDN8 102 aa13.43□□□□□ -0.26
ACTN4-208ENST00000497637 C10orf126Q8N4M7 172 aa13.42□□□□□ -0.26
ACTN4-208ENST00000497637 A0A0J9YXY3 114 aa13.41□□□□□ -0.26
ACTN4-208ENST00000497637 FXYD2P54710 66 aa13.41□□□□□ -0.26
ACTN4-208ENST00000497637 LINC01561Q8N1V8 128 aa13.41□□□□□ -0.26
ACTN4-208ENST00000497637 A0A087WZ39 114 aa13.4□□□□□ -0.26
ACTN4-208ENST00000497637 TAX1BP3O14907 124 aa13.4□□□□□ -0.26
ACTN4-208ENST00000497637 NDUFA1O15239 70 aa13.4□□□□□ -0.26
ACTN4-208ENST00000497637 ANGP03950 147 aaKnown RBP13.4□□□□□ -0.26
ACTN4-208ENST00000497637 SRSF9Q13242 221 aaKnown RBP eCLIP13.4□□□□□ -0.26
ACTN4-208ENST00000497637 Q8N1X5 172 aa13.4□□□□□ -0.26
ACTN4-208ENST00000497637 LINC00269Q8N2A0 174 aa13.4□□□□□ -0.26
ACTN4-208ENST00000497637 PTTG1IPP53801 180 aa13.38□□□□□ -0.27
ACTN4-208ENST00000497637 ESRGQ1W209 222 aa13.38□□□□□ -0.27
ACTN4-208ENST00000497637 Q8N3U1 123 aa13.38□□□□□ -0.27
ACTN4-208ENST00000497637 C15orf53Q8NAA6 179 aa13.38□□□□□ -0.27
ACTN4-208ENST00000497637 TIMM17BO60830 172 aa13.37□□□□□ -0.27
ACTN4-208ENST00000497637 REG3AQ06141 175 aa13.37□□□□□ -0.27
ACTN4-208ENST00000497637 TMEM238C9JI98 176 aa13.36□□□□□ -0.27
ACTN4-208ENST00000497637 K7EP13 123 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms