RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 ODF3Q96PU9 254 aa3.57□□□□□ -1.84
CSMD3-208ENST00000497026 TM2D3Q9BRN9 247 aa3.57□□□□□ -1.84
CSMD3-208ENST00000497026 CHCHD5Q9BSY4 110 aa3.57□□□□□ -1.84
CSMD3-208ENST00000497026 EDA2RQ9HAV5 297 aa3.57□□□□□ -1.84
CSMD3-208ENST00000497026 DAZ1Q9NQZ3 744 aaKnown RBP3.57□□□□□ -1.84
CSMD3-208ENST00000497026 TGP01266 2768 aa3.56□□□□□ -1.84
CSMD3-208ENST00000497026 IGKV1D-37A0A075B6S9 117 aa3.56□□□□□ -1.84
CSMD3-208ENST00000497026 SMKR1H3BMG3 65 aa3.56□□□□□ -1.84
CSMD3-208ENST00000497026 K7EMT4 169 aa3.56□□□□□ -1.84
CSMD3-208ENST00000497026 IGKV1-17P01599 117 aa3.56□□□□□ -1.84
CSMD3-208ENST00000497026 TRACP01848 142 aa3.56□□□□□ -1.84
CSMD3-208ENST00000497026 COX6CP09669 75 aa3.56□□□□□ -1.84
CSMD3-208ENST00000497026 CRYGAP11844 174 aa3.56□□□□□ -1.84
CSMD3-208ENST00000497026 COX7CP15954 63 aa3.56□□□□□ -1.84
CSMD3-208ENST00000497026 SFTA2Q6UW10 78 aa3.56□□□□□ -1.84
CSMD3-208ENST00000497026 C2orf82Q6UX34 121 aa3.56□□□□□ -1.84
CSMD3-208ENST00000497026 ZFP2Q6ZN57 461 aa3.56□□□□□ -1.84
CSMD3-208ENST00000497026 IGHV3OR16-13A0A075B7E8 117 aa3.55□□□□□ -1.84
CSMD3-208ENST00000497026 IGHV3-49A0A0A0MS15 119 aa3.55□□□□□ -1.84
CSMD3-208ENST00000497026 IGHV3-74A0A0B4J1X5 117 aa3.55□□□□□ -1.84
CSMD3-208ENST00000497026 IGHV7-4-1A0A0J9YVY3 117 aa3.55□□□□□ -1.84
CSMD3-208ENST00000497026 RBAKDNA6NC62 111 aa3.55□□□□□ -1.84
CSMD3-208ENST00000497026 RBMY1BA6NDE4 496 aaKnown RBP3.55□□□□□ -1.84
CSMD3-208ENST00000497026 RBMY1EA6NEQ0 496 aaKnown RBP3.55□□□□□ -1.84
CSMD3-208ENST00000497026 RBMY1DP0C7P1 496 aaKnown RBP3.55□□□□□ -1.84
CSMD3-208ENST00000497026 IGLC6P0CF74 106 aa3.55□□□□□ -1.84
CSMD3-208ENST00000497026 CFC1BP0CG36 223 aa3.55□□□□□ -1.84
CSMD3-208ENST00000497026 CFC1P0CG37 223 aa3.55□□□□□ -1.84
CSMD3-208ENST00000497026 LYZP61626 148 aa3.55□□□□□ -1.84
CSMD3-208ENST00000497026 PDE6HQ13956 83 aa3.55□□□□□ -1.84
CSMD3-208ENST00000497026 COX8CQ7Z4L0 72 aa3.55□□□□□ -1.84
CSMD3-208ENST00000497026 LINC00643Q86TS7 51 aa3.55□□□□□ -1.84
CSMD3-208ENST00000497026 SCGB3A1Q96QR1 104 aa3.55□□□□□ -1.84
CSMD3-208ENST00000497026 RHPN1-AS1Q9BWJ2 59 aa3.55□□□□□ -1.84
CSMD3-208ENST00000497026 CNFNQ9BYD5 112 aa3.55□□□□□ -1.84
CSMD3-208ENST00000497026 TRBV19A0A075B6N1 114 aa3.54□□□□□ -1.84
CSMD3-208ENST00000497026 A0A0J9YY99 117 aa3.54□□□□□ -1.84
CSMD3-208ENST00000497026 H3BRN7 92 aa3.54□□□□□ -1.84
CSMD3-208ENST00000497026 MRPS12O15235 138 aaKnown RBP3.54□□□□□ -1.84
CSMD3-208ENST00000497026 IGHV3-30P01768 117 aa3.54□□□□□ -1.84
CSMD3-208ENST00000497026 CRYGDP07320 174 aa3.54□□□□□ -1.84
CSMD3-208ENST00000497026 IGHV3-30-5P0DP03 117 aa3.54□□□□□ -1.84
CSMD3-208ENST00000497026 LGALS3P17931 250 aaKnown RBP3.54□□□□□ -1.84
CSMD3-208ENST00000497026 TRPT1Q86TN4 253 aaKnown RBP3.54□□□□□ -1.84
CSMD3-208ENST00000497026 EXOC3-AS1Q8N2X6 119 aa3.54□□□□□ -1.84
CSMD3-208ENST00000497026 RNF185Q96GF1 192 aa3.54□□□□□ -1.84
CSMD3-208ENST00000497026 SMIM2Q9BVW6 85 aa3.54□□□□□ -1.84
CSMD3-208ENST00000497026 RETNQ9HD89 108 aa3.54□□□□□ -1.84
CSMD3-208ENST00000497026 COL7A1Q02388 2944 aa3.54□□□□□ -1.84
CSMD3-208ENST00000497026 IGLV2-18A0A075B6J9 118 aa3.53□□□□□ -1.84
CSMD3-208ENST00000497026 IGHV3-66A0A0C4DH42 116 aa3.53□□□□□ -1.84
CSMD3-208ENST00000497026 TRBV30A0A0K0K1B3 111 aa3.53□□□□□ -1.84
CSMD3-208ENST00000497026 LOC107984640A0A0U1RRK4 108 aa3.53□□□□□ -1.84
CSMD3-208ENST00000497026 H3BTX0 84 aa3.53□□□□□ -1.84
CSMD3-208ENST00000497026 M0R3E3 92 aa3.53□□□□□ -1.84
CSMD3-208ENST00000497026 PPP1R17O96001 155 aa3.53□□□□□ -1.84
CSMD3-208ENST00000497026 IGHV3-33P01772 117 aa3.53□□□□□ -1.84
CSMD3-208ENST00000497026 SIGLEC15Q6ZMC9 328 aa3.53□□□□□ -1.84
CSMD3-208ENST00000497026 TOMM6Q96B49 74 aa3.53□□□□□ -1.84
CSMD3-208ENST00000497026 METTL26Q96S19 204 aa3.53□□□□□ -1.84
CSMD3-208ENST00000497026 SLC50A1Q9BRV3 221 aa3.53□□□□□ -1.84
CSMD3-208ENST00000497026 SHANK2-AS3Q9BTD1 123 aa3.53□□□□□ -1.84
CSMD3-208ENST00000497026 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
CSMD3-208ENST00000497026 IGKV3-7A0A075B6H7 116 aa3.53□□□□□ -1.85
CSMD3-208ENST00000497026 TEX49A0A1B0GTD5 131 aa3.53□□□□□ -1.85
CSMD3-208ENST00000497026 C11orf86A6NJI1 115 aa3.53□□□□□ -1.85
CSMD3-208ENST00000497026 NDUFC2-KCTD14E9PQ53 114 aa3.53□□□□□ -1.85
CSMD3-208ENST00000497026 APRG1Q8IVJ8 170 aa3.53□□□□□ -1.85
CSMD3-208ENST00000497026 POM121L12Q8N7R1 296 aa3.53□□□□□ -1.85
CSMD3-208ENST00000497026 SLC25A29Q8N8R3 303 aa3.53□□□□□ -1.85
CSMD3-208ENST00000497026 DCANP1Q8TF63 244 aa3.53□□□□□ -1.85
CSMD3-208ENST00000497026 TMEM263Q8WUH6 116 aaKnown RBP3.53□□□□□ -1.85
CSMD3-208ENST00000497026 PLEKHB2Q96CS7 222 aa3.53□□□□□ -1.85
CSMD3-208ENST00000497026 KMT2CQ8NEZ4 4911 aaKnown RBP3.52□□□□□ -1.85
CSMD3-208ENST00000497026 TENM3Q9P273 2699 aa3.52□□□□□ -1.85
CSMD3-208ENST00000497026 TRAV13-1A0A0B4J241 112 aa3.52□□□□□ -1.85
CSMD3-208ENST00000497026 SDHAF1A6NFY7 115 aa3.52□□□□□ -1.85
CSMD3-208ENST00000497026 M0R381 172 aa3.52□□□□□ -1.85
CSMD3-208ENST00000497026 INAFM2P0DMQ5 153 aa3.52□□□□□ -1.85
CSMD3-208ENST00000497026 CRIP1P50238 77 aa3.52□□□□□ -1.85
CSMD3-208ENST00000497026 KRTAP10-5P60370 271 aa3.52□□□□□ -1.85
CSMD3-208ENST00000497026 ZNF415Q09FC8 603 aa3.52□□□□□ -1.85
CSMD3-208ENST00000497026 ERCC8Q13216 396 aa3.52□□□□□ -1.85
CSMD3-208ENST00000497026 COPS9Q8WXC6 57 aa3.52□□□□□ -1.85
CSMD3-208ENST00000497026 RNF125Q96EQ8 232 aa3.52□□□□□ -1.85
CSMD3-208ENST00000497026 ICOSQ9Y6W8 199 aa3.52□□□□□ -1.85
CSMD3-208ENST00000497026 A0A0J9YX75 114 aa3.51□□□□□ -1.85
CSMD3-208ENST00000497026 H7C2G1 150 aa3.51□□□□□ -1.85
CSMD3-208ENST00000497026 K7EQG2 157 aa3.51□□□□□ -1.85
CSMD3-208ENST00000497026 LEPROTO15243 131 aa3.51□□□□□ -1.85
CSMD3-208ENST00000497026 RPL18AQ02543 176 aaKnown RBP3.51□□□□□ -1.85
CSMD3-208ENST00000497026 MUC7Q8TAX7 377 aa3.51□□□□□ -1.85
CSMD3-208ENST00000497026 TMEM141Q96I45 108 aa3.51□□□□□ -1.85
CSMD3-208ENST00000497026 OVOL2Q9BRP0 275 aa3.51□□□□□ -1.85
CSMD3-208ENST00000497026 STARD9Q9P2P6 4700 aa3.51□□□□□ -1.85
CSMD3-208ENST00000497026 STAB2Q8WWQ8 2551 aa3.5□□□□□ -1.85
CSMD3-208ENST00000497026 J3QQQ9 107 aa3.5□□□□□ -1.85
CSMD3-208ENST00000497026 LST1O00453 97 aa3.5□□□□□ -1.85
CSMD3-208ENST00000497026 NDUFC2O95298 119 aa3.5□□□□□ -1.85
CSMD3-208ENST00000497026 RPL35AP18077 110 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms