RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 IGHV1-58A0A0C4DH39 117 aa11.37□□□□□ -0.59
CBX4-204ENST00000495122 ATP5G1P05496 136 aa11.37□□□□□ -0.59
CBX4-204ENST00000495122 PLECQ15149 4684 aaKnown RBP11.37□□□□□ -0.59
CBX4-204ENST00000495122 LOC100131303A0A0U1RQF7 123 aa11.36□□□□□ -0.59
CBX4-204ENST00000495122 SMIM13P0DJ93 91 aa11.36□□□□□ -0.59
CBX4-204ENST00000495122 PTTG1IPP53801 180 aa11.36□□□□□ -0.59
CBX4-204ENST00000495122 LINC00469Q8N7U9 141 aa11.36□□□□□ -0.59
CBX4-204ENST00000495122 A0A0J9YY99 117 aa11.35□□□□□ -0.59
CBX4-204ENST00000495122 PAX4O43316 350 aa11.35□□□□□ -0.59
CBX4-204ENST00000495122 GYPEP15421 78 aa11.35□□□□□ -0.59
CBX4-204ENST00000495122 VSIG2Q96IQ7 327 aa11.35□□□□□ -0.59
CBX4-204ENST00000495122 C9orf118A6NHY6 69 aa11.34□□□□□ -0.59
CBX4-204ENST00000495122 IGHV3-30-3P0DP02 117 aa11.34□□□□□ -0.59
CBX4-204ENST00000495122 FXYD2P54710 66 aa11.34□□□□□ -0.59
CBX4-204ENST00000495122 TSPEAR-AS2P59090 65 aa11.34□□□□□ -0.59
CBX4-204ENST00000495122 A0A1B0GUV1 79 aa11.33□□□□□ -0.6
CBX4-204ENST00000495122 A0A1B0GWB2 263 aa11.33□□□□□ -0.6
CBX4-204ENST00000495122 C11orf68Q9H3H3 251 aaKnown RBP11.33□□□□□ -0.6
CBX4-204ENST00000495122 TMEM238C9JI98 176 aa11.32□□□□□ -0.6
CBX4-204ENST00000495122 CCL25O15444 150 aa11.32□□□□□ -0.6
CBX4-204ENST00000495122 SRSF9Q13242 221 aaKnown RBP eCLIP11.32□□□□□ -0.6
CBX4-204ENST00000495122 RNASE13Q5GAN3 156 aaKnown RBP11.32□□□□□ -0.6
CBX4-204ENST00000495122 LINC00242Q5T6M2 205 aa11.32□□□□□ -0.6
CBX4-204ENST00000495122 Q6ZVH6 145 aa11.32□□□□□ -0.6
CBX4-204ENST00000495122 CHCHD5Q9BSY4 110 aa11.32□□□□□ -0.6
CBX4-204ENST00000495122 IGLV5-39A0A0G2JS06 123 aa11.31□□□□□ -0.6
CBX4-204ENST00000495122 BIRC6Q9NR09 4857 aa11.31□□□□□ -0.6
CBX4-204ENST00000495122 H3BNG1 76 aa11.3□□□□□ -0.6
CBX4-204ENST00000495122 TIMM17BO60830 172 aa11.3□□□□□ -0.6
CBX4-204ENST00000495122 UBE2V1Q13404 147 aa11.3□□□□□ -0.6
CBX4-204ENST00000495122 MRPL23Q16540 153 aaKnown RBP11.29□□□□□ -0.6
CBX4-204ENST00000495122 CDKN2A-AS1Q9UH64 79 aa11.29□□□□□ -0.6
CBX4-204ENST00000495122 GAGE6Q13070 117 aa11.28□□□□□ -0.6
CBX4-204ENST00000495122 VAMP3Q15836 100 aa11.28□□□□□ -0.6
CBX4-204ENST00000495122 NHP2Q9NX24 153 aaKnown RBP11.28□□□□□ -0.6
CBX4-204ENST00000495122 NDUFA12Q9UI09 145 aa11.28□□□□□ -0.6
CBX4-204ENST00000495122 A0A0J9YXY3 114 aa11.27□□□□□ -0.61
CBX4-204ENST00000495122 NDUFA1O15239 70 aa11.27□□□□□ -0.61
CBX4-204ENST00000495122 IGHV3-30P01768 117 aa11.27□□□□□ -0.61
CBX4-204ENST00000495122 IGHV3-30-5P0DP03 117 aa11.27□□□□□ -0.61
CBX4-204ENST00000495122 C12orf74Q32Q52 190 aa11.27□□□□□ -0.61
CBX4-204ENST00000495122 CELA1Q9UNI1 258 aa11.27□□□□□ -0.61
CBX4-204ENST00000495122 ICOSQ9Y6W8 199 aa11.27□□□□□ -0.61
CBX4-204ENST00000495122 TRAV13-1A0A0B4J241 112 aa11.26□□□□□ -0.61
CBX4-204ENST00000495122 SPINK8P0C7L1 97 aa11.26□□□□□ -0.61
CBX4-204ENST00000495122 GTF2H5Q6ZYL4 71 aa11.26□□□□□ -0.61
CBX4-204ENST00000495122 LINC01561Q8N1V8 128 aa11.26□□□□□ -0.61
CBX4-204ENST00000495122 C10orf126Q8N4M7 172 aa11.26□□□□□ -0.61
CBX4-204ENST00000495122 SPANXDQ9BXN6 97 aa11.26□□□□□ -0.61
CBX4-204ENST00000495122 SPANXCQ9NY87 97 aa11.26□□□□□ -0.61
CBX4-204ENST00000495122 TRAV8-3A0A0A6YYJ7 113 aa11.25□□□□□ -0.61
CBX4-204ENST00000495122 SMIM1B2RUZ4 78 aa11.25□□□□□ -0.61
CBX4-204ENST00000495122 DEFB4AO15263 64 aa11.25□□□□□ -0.61
CBX4-204ENST00000495122 RPL24P83731 157 aaKnown RBP11.25□□□□□ -0.61
CBX4-204ENST00000495122 SFTA2Q6UW10 78 aa11.25□□□□□ -0.61
CBX4-204ENST00000495122 IGHV3-64A0A075B6Q5 118 aa11.24□□□□□ -0.61
CBX4-204ENST00000495122 A0A1W2PPM0 123 aa11.24□□□□□ -0.61
CBX4-204ENST00000495122 F5H768 121 aa11.24□□□□□ -0.61
CBX4-204ENST00000495122 FABP2P12104 132 aa11.24□□□□□ -0.61
CBX4-204ENST00000495122 HERV-K104P63124 156 aa11.24□□□□□ -0.61
CBX4-204ENST00000495122 COX6A2Q02221 97 aa11.24□□□□□ -0.61
CBX4-204ENST00000495122 COPS9Q8WXC6 57 aa11.24□□□□□ -0.61
CBX4-204ENST00000495122 PPDPFQ9H3Y8 114 aa11.24□□□□□ -0.61
CBX4-204ENST00000495122 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.23□□□□□ -0.61
CBX4-204ENST00000495122 H3BUT2 72 aa11.23□□□□□ -0.61
CBX4-204ENST00000495122 IFITM1P13164 125 aa11.23□□□□□ -0.61
CBX4-204ENST00000495122 CIRBPQ14011 172 aaKnown RBP11.23□□□□□ -0.61
CBX4-204ENST00000495122 IGLV4-60A0A075B6I1 120 aa11.22□□□□□ -0.61
CBX4-204ENST00000495122 A0A0J9YWU9 116 aa11.22□□□□□ -0.61
CBX4-204ENST00000495122 K7EP13 123 aa11.22□□□□□ -0.61
CBX4-204ENST00000495122 RBX1P62877 108 aa11.22□□□□□ -0.61
CBX4-204ENST00000495122 LELP1Q5T871 98 aa11.22□□□□□ -0.61
CBX4-204ENST00000495122 K7EP34 96 aa11.21□□□□□ -0.61
CBX4-204ENST00000495122 SS18Q15532 418 aa11.21□□□□□ -0.61
CBX4-204ENST00000495122 RAB37Q96AX2 223 aa11.21□□□□□ -0.61
CBX4-204ENST00000495122 LITAFQ99732 161 aa11.21□□□□□ -0.61
CBX4-204ENST00000495122 A0A087WZ39 114 aa11.2□□□□□ -0.62
CBX4-204ENST00000495122 GAGE10A6NGK3 116 aa11.2□□□□□ -0.62
CBX4-204ENST00000495122 IGLL5B9A064 214 aa11.2□□□□□ -0.62
CBX4-204ENST00000495122 MIAQ16674 131 aa11.2□□□□□ -0.62
CBX4-204ENST00000495122 LYRM7Q5U5X0 104 aa11.2□□□□□ -0.62
CBX4-204ENST00000495122 IGHV3OR16-9A0A0B4J2B5 98 aa11.19□□□□□ -0.62
CBX4-204ENST00000495122 A0A0B4J2C4 111 aa11.19□□□□□ -0.62
CBX4-204ENST00000495122 LINC00959A0A1B0GUT2 108 aa11.19□□□□□ -0.62
CBX4-204ENST00000495122 TMEM262E9PQX1 116 aa11.19□□□□□ -0.62
CBX4-204ENST00000495122 K7ERJ3 54 aa11.18□□□□□ -0.62
CBX4-204ENST00000495122 LINC00476Q8WZB0 136 aa11.18□□□□□ -0.62
CBX4-204ENST00000495122 ZNF625Q96I27 306 aaPredicted RBP11.18□□□□□ -0.62
CBX4-204ENST00000495122 A0A096LPF7 62 aa11.17□□□□□ -0.62
CBX4-204ENST00000495122 NUPR2A6NF83 97 aa11.17□□□□□ -0.62
CBX4-204ENST00000495122 COX7B2Q8TF08 81 aa11.16□□□□□ -0.62
CBX4-204ENST00000495122 Q9H8V8 135 aa11.16□□□□□ -0.62
CBX4-204ENST00000495122 SPCS1Q9Y6A9 102 aa11.16□□□□□ -0.62
CBX4-204ENST00000495122 FRAS1Q86XX4 4008 aa11.16□□□□□ -0.62
CBX4-204ENST00000495122 KMT2AQ03164 3969 aa11.16□□□□□ -0.62
CBX4-204ENST00000495122 DNAH6Q9C0G6 4158 aa11.15□□□□□ -0.62
CBX4-204ENST00000495122 HTN3P15516 51 aa11.15□□□□□ -0.62
CBX4-204ENST00000495122 MUSTN1Q8IVN3 82 aa11.15□□□□□ -0.62
CBX4-204ENST00000495122 PRO1854Q9UHT4 67 aa11.15□□□□□ -0.62
CBX4-204ENST00000495122 A4D1N5 150 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms