RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 C14orf132Q9NPU4 83 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 PLCE1Q9P212 2302 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 MED13LQ71F56 2210 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 NBASA2RRP1 2371 aa1.96□□□□□ -2.09
MDC1-208ENST00000494654 LRBAP50851 2863 aa1.96□□□□□ -2.09
MDC1-208ENST00000494654 POLEQ07864 2286 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 AHCTF1Q8WYP5 2266 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 SETD2Q9BYW2 2564 aaPredicted RBP1.96□□□□□ -2.1
MDC1-208ENST00000494654 CENPEQ02224 2701 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 TRAV23DV6A0A075B6W5 121 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 TRBV7-4A0A0J9YYF1 115 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 A0A0U1RQV1 116 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 A0A0U1RRA0 63 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 A0A1W2PNU3 283 aaPredicted RBP1.96□□□□□ -2.1
MDC1-208ENST00000494654 H0YGX0 51 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 M0QY20 66 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 LY6G6DO95868 133 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 CCL4P13236 92 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 HILS1P60008 231 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 SNRPD3P62318 126 aaKnown RBP1.96□□□□□ -2.1
MDC1-208ENST00000494654 RBM3P98179 157 aaKnown RBP1.96□□□□□ -2.1
MDC1-208ENST00000494654 PMAIP1Q13794 54 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 SS18Q15532 418 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 ATP1A1-AS1Q5TC04 95 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 Q8N1X5 172 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 FAM104AQ969W3 186 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 KRTAP4-2Q9BYR5 136 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 SIRPDQ9H106 197 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 DEFB127Q9H1M4 99 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 C11orf68Q9H3H3 251 aaKnown RBP1.96□□□□□ -2.1
MDC1-208ENST00000494654 ORMDL1Q9P0S3 153 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 S4R3C0 116 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 USP9YO00507 2555 aaPredicted RBP1.96□□□□□ -2.1
MDC1-208ENST00000494654 ITPR2Q14571 2701 aa1.96□□□□□ -2.1
MDC1-208ENST00000494654 CRYBG3Q68DQ2 2970 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 LRRK2Q5S007 2527 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 A0A087WYN8 130 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 IGHV3-16A0A0C4DH30 117 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 A0A1W2PRX2 142 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 IGKV2-29A2NJV5 120 aaPredicted RBP1.95□□□□□ -2.1
MDC1-208ENST00000494654 A8MZ25 164 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 SMIM1B2RUZ4 78 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 F5H697 171 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 CCL21O00585 134 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 IGHV3-23P01764 117 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 MIFP14174 115 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 COX7A1P24310 79 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 ZFP36P26651 326 aaKnown RBP1.95□□□□□ -2.1
MDC1-208ENST00000494654 ESRGQ1W209 222 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 C9orf129Q5T035 196 aaKnown RBP1.95□□□□□ -2.1
MDC1-208ENST00000494654 LYPD2Q6UXB3 125 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 IL17DQ8TAD2 202 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 RMI2Q96E14 147 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 ZNF625Q96I27 306 aaPredicted RBP1.95□□□□□ -2.1
MDC1-208ENST00000494654 CHCHD7Q9BUK0 85 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 UBL5Q9BZL1 73 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 Q9H8V8 135 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 Q9HAA7 133 aa1.95□□□□□ -2.1
MDC1-208ENST00000494654 CSMD2Q7Z408 3487 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 CELSR2Q9HCU4 2923 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 LOC110117498A0A087WWA1 95 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 A0A087WWL8 130 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 IGHV7-81A0A0B4J1V7 117 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 E7EQL1 145 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 F6UB75 175 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 NDUFA4O00483 81 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 PRYO14603 147 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 NCR3O14931 201 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 LECT2O14960 151 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 GNRH2O43555 120 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 SAA4P35542 130 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 CXCL6P80162 114 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 NREPQ16612 68 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 FAM229BQ4G0N7 80 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 C19orf54Q5BKX5 351 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 PIK3CD-AS1Q5SR53 167 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 FAM74A4Q5TZK3 123 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 IGFL2Q6UWQ7 119 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 ENHOQ6UWT2 76 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 MIR7-3HGQ8N6C7 128 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 LINC00337Q8N6G1 96 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 SMIM11BQ8TCY0 68 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 DYNLRB2Q8TF09 96 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 KRTAP4-11Q9BYQ6 195 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 DPM3Q9P2X0 92 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 LINC00474Q9P2X8 69 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 CDKN2A-AS1Q9UH64 79 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 MOB4Q9Y3A3 225 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 SPTBN1Q01082 2364 aaKnown RBP1.94□□□□□ -2.1
MDC1-208ENST00000494654 NF1P21359 2839 aa1.94□□□□□ -2.1
MDC1-208ENST00000494654 ABCA1O95477 2261 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 F8P00451 2351 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 FBN3Q75N90 2809 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 CELSR1Q9NYQ6 3014 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 IGKV2-28A0A075B6P5 120 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 IGHV1OR15-1A0A075B7D0 117 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 IGHV3OR16-8A0A075B7F1 116 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 IGHV3-66A0A0C4DH42 116 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 ATP6V0E1O15342 81 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 IGKV2D-28P01615 120 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms