RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 ABCA6Q8N139 1617 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 RAPGEF6Q8TEU7 1601 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 ARFGEF3Q5TH69 2177 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 PTPRDP23468 1912 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 PATJQ8NI35 1801 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 A0A087WVE0 104 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 PIGBOS1A0A0B4J2F0 54 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 LINC01549A6NIU2 74 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 ZNF815PA8K554 130 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 H3BVH4 76 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 HMGN4O00479 90 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 DNAL4O96015 105 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 PPYP01298 95 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 IGLV3-1P01715 115 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 ARMS2P0C7Q2 107 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 CAV3P56539 151 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 EDDM3BP56851 147 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 PLGLAQ15195 96 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 MYO7BQ6PIF6 2116 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 NMES1Q9C002 83 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 CMC2Q9NRP2 79 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 NDUFA4L2Q9NRX3 87 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 PLXNA2O75051 1894 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 LAMC1P11047 1609 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 RNF17Q9BXT8 1623 aaKnown RBP0.81□□□□□ -2.28
LMNB1-207ENST00000494185 PTPN23Q9H3S7 1636 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 MYH8P13535 1937 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 TCHHQ07283 1943 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 CEP192Q8TEP8 1941 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 DNAJC13O75165 2243 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 UNC13CQ8NB66 2214 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 MROH2AA6NES4 1674 aa0.81□□□□□ -2.28
LMNB1-207ENST00000494185 PPRC1Q5VV67 1664 aaKnown RBP0.81□□□□□ -2.28
LMNB1-207ENST00000494185 A0A1B0GUL6 1792 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 PPLO60437 1756 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 ESPL1Q14674 2120 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 ATP7BP35670 1465 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 KIF20BQ96Q89 1820 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 TNRC6BQ9UPQ9 1833 aaKnown RBP0.8□□□□□ -2.28
LMNB1-207ENST00000494185 SYCP2Q9BX26 1530 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 DOCK1Q14185 1865 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 UNC13BO14795 1591 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 TRBV7-4A0A0J9YYF1 115 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 LEPROTL1O95214 131 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 Q6ZSA8 131 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 SMIM4Q8WVI0 70 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 PRR15LQ9BU68 103 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 WFDC10AQ9H1F0 79 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 MRPL36Q9P0J6 103 aaKnown RBP0.8□□□□□ -2.28
LMNB1-207ENST00000494185 TOPAZ1Q8N9V7 1692 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 RGPD2P0DJD1 1756 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 ANKRD17O75179 2603 aaKnown RBP0.8□□□□□ -2.28
LMNB1-207ENST00000494185 MYO7AQ13402 2215 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 SPAG17Q6Q759 2223 aa0.8□□□□□ -2.28
LMNB1-207ENST00000494185 AGLP35573 1532 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 CDC42BPGQ6DT37 1551 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 PEAK1Q9H792 1746 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 MUC22E2RYF6 1773 aaPredicted RBP0.79□□□□□ -2.28
LMNB1-207ENST00000494185 TRAV23DV6A0A075B6W5 121 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 TRBV30A0A0K0K1B3 111 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 NUPR2A6NF83 97 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 D6R8Y8 96 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 M0R135 149 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 COX6CP09669 75 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 SAA2P0DJI9 122 aaPredicted RBP0.79□□□□□ -2.28
LMNB1-207ENST00000494185 LYNX1P0DP58 116 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 SPINK7P58062 85 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 ATXN8Q156A1 80 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 DEFB132Q7Z7B7 95 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 MUSTN1Q8IVN3 82 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 FDCSPQ8NFU4 85 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 DMAC1Q96GE9 116 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 GNG13Q9P2W3 67 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 LINC01558Q9Y6Z2 57 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 TANC1Q9C0D5 1861 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 EFCAB6Q5THR3 1501 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 ZMYM4Q5VZL5 1548 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 MED12Q93074 2177 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 UGGT1Q9NYU2 1555 aa0.79□□□□□ -2.28
LMNB1-207ENST00000494185 BIVM-ERCC5R4GMW8 1640 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 CROCC2H7BZ55 1655 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 RGPD1P0DJD0 1748 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 ITSN1Q15811 1721 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 XRN1Q8IZH2 1706 aaKnown RBP0.78□□□□□ -2.28
LMNB1-207ENST00000494185 NWD2Q9ULI1 1742 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 SIPA1L3O60292 1781 aaPredicted RBP0.78□□□□□ -2.28
LMNB1-207ENST00000494185 LAMB1P07942 1786 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 SCN11AQ9UI33 1791 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 DLG5Q8TDM6 1919 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 A0A087WTM6 91 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 TRBV10-1A0A0K0K1A3 114 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 M0R3E3 92 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 PPP1R17O96001 155 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 PRH1P02810 166 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 ZNF137PP52743 207 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 SPAG11BQ08648 103 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 SPAG11AQ6PDA7 123 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 SPATA8Q6RVD6 105 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 Q86TA4 180 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 TMEM263Q8WUH6 116 aaKnown RBP0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms