RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 ZFAND2AQ8N6M9 145 aa5.27□□□□□ -1.57
SMARCE1-211ENST00000493660 RETNQ9HD89 108 aa5.27□□□□□ -1.57
SMARCE1-211ENST00000493660 ODF3L2Q3SX64 289 aa5.26□□□□□ -1.57
SMARCE1-211ENST00000493660 TMEM243Q9BU79 118 aa5.26□□□□□ -1.57
SMARCE1-211ENST00000493660 TRAV21A0A0B4J279 112 aa5.26□□□□□ -1.57
SMARCE1-211ENST00000493660 PRB4P10163 310 aaPredicted RBP5.26□□□□□ -1.57
SMARCE1-211ENST00000493660 ZNF80P51504 273 aaPredicted RBP5.26□□□□□ -1.57
SMARCE1-211ENST00000493660 DEFB1P60022 68 aa5.26□□□□□ -1.57
SMARCE1-211ENST00000493660 ICOSQ9Y6W8 199 aa5.26□□□□□ -1.57
SMARCE1-211ENST00000493660 WNK1Q9H4A3 2382 aa5.26□□□□□ -1.57
SMARCE1-211ENST00000493660 H7C2G1 150 aa5.25□□□□□ -1.57
SMARCE1-211ENST00000493660 EIF4EBP3O60516 100 aaPredicted RBP5.25□□□□□ -1.57
SMARCE1-211ENST00000493660 Q6JHZ5 121 aa5.25□□□□□ -1.57
SMARCE1-211ENST00000493660 CNFNQ9BYD5 112 aa5.25□□□□□ -1.57
SMARCE1-211ENST00000493660 LAMTOR3Q9UHA4 124 aa5.25□□□□□ -1.57
SMARCE1-211ENST00000493660 FHL2Q14192 279 aa5.25□□□□□ -1.57
SMARCE1-211ENST00000493660 ORMDL2Q53FV1 153 aa5.25□□□□□ -1.57
SMARCE1-211ENST00000493660 PRR9Q5T870 116 aa5.25□□□□□ -1.57
SMARCE1-211ENST00000493660 TOMM6Q96B49 74 aa5.25□□□□□ -1.57
SMARCE1-211ENST00000493660 SCGB3A1Q96QR1 104 aa5.25□□□□□ -1.57
SMARCE1-211ENST00000493660 TIMM21Q9BVV7 248 aa5.25□□□□□ -1.57
SMARCE1-211ENST00000493660 RHOHQ15669 191 aa5.24□□□□□ -1.57
SMARCE1-211ENST00000493660 FP248Q71RG6 208 aaPredicted RBP5.24□□□□□ -1.57
SMARCE1-211ENST00000493660 STHQ8IWL8 128 aa5.24□□□□□ -1.57
SMARCE1-211ENST00000493660 C19orf73Q9NVV2 129 aa5.24□□□□□ -1.57
SMARCE1-211ENST00000493660 TEP1Q99973 2627 aaKnown RBP5.24□□□□□ -1.57
SMARCE1-211ENST00000493660 MED14OSP0DP75 135 aa5.23□□□□□ -1.57
SMARCE1-211ENST00000493660 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
SMARCE1-211ENST00000493660 USP17L23D6RBM5 183 aa5.23□□□□□ -1.57
SMARCE1-211ENST00000493660 INAFM2P0DMQ5 153 aa5.23□□□□□ -1.57
SMARCE1-211ENST00000493660 RNASE4P34096 147 aaKnown RBP5.23□□□□□ -1.57
SMARCE1-211ENST00000493660 C4orf48Q5BLP8 95 aa5.23□□□□□ -1.57
SMARCE1-211ENST00000493660 SPATA3Q8NHX4 192 aa5.23□□□□□ -1.57
SMARCE1-211ENST00000493660 TRAV26-2A0A0B4J265 109 aa5.22□□□□□ -1.57
SMARCE1-211ENST00000493660 IGKV3D-20A0A0C4DH25 116 aa5.22□□□□□ -1.57
SMARCE1-211ENST00000493660 RBMY1BA6NDE4 496 aaKnown RBP5.22□□□□□ -1.57
SMARCE1-211ENST00000493660 RBMY1EA6NEQ0 496 aaKnown RBP5.22□□□□□ -1.57
SMARCE1-211ENST00000493660 C11orf86A6NJI1 115 aa5.22□□□□□ -1.57
SMARCE1-211ENST00000493660 RBMY1DP0C7P1 496 aaKnown RBP5.22□□□□□ -1.57
SMARCE1-211ENST00000493660 SPINK13Q1W4C9 94 aa5.22□□□□□ -1.57
SMARCE1-211ENST00000493660 PRR15Q8IV56 129 aa5.22□□□□□ -1.57
SMARCE1-211ENST00000493660 LINC00467Q9BRT7 94 aa5.22□□□□□ -1.57
SMARCE1-211ENST00000493660 C11orf21Q9P2W6 132 aa5.22□□□□□ -1.57
SMARCE1-211ENST00000493660 SETD2Q9BYW2 2564 aaPredicted RBP5.22□□□□□ -1.57
SMARCE1-211ENST00000493660 IGKV3-20P01619 116 aa5.22□□□□□ -1.57
SMARCE1-211ENST00000493660 ATP5EP56381 51 aaPredicted RBP5.22□□□□□ -1.57
SMARCE1-211ENST00000493660 MUSTN1Q8IVN3 82 aa5.22□□□□□ -1.57
SMARCE1-211ENST00000493660 NRACQ8N912 160 aa5.22□□□□□ -1.57
SMARCE1-211ENST00000493660 NIPBLQ6KC79 2804 aaeCLIP5.21□□□□□ -1.57
SMARCE1-211ENST00000493660 JMJD1CQ15652 2540 aa5.21□□□□□ -1.57
SMARCE1-211ENST00000493660 INSP01308 110 aa5.21□□□□□ -1.58
SMARCE1-211ENST00000493660 LGALS3P17931 250 aaKnown RBP5.21□□□□□ -1.58
SMARCE1-211ENST00000493660 Q6ZRU5 148 aa5.21□□□□□ -1.58
SMARCE1-211ENST00000493660 ZNF575Q86XF7 245 aa5.21□□□□□ -1.58
SMARCE1-211ENST00000493660 VSIG2Q96IQ7 327 aa5.21□□□□□ -1.58
SMARCE1-211ENST00000493660 AMELXQ99217 191 aa5.21□□□□□ -1.58
SMARCE1-211ENST00000493660 IGHV1OR15-1A0A075B7D0 117 aa5.21□□□□□ -1.58
SMARCE1-211ENST00000493660 TRAV12-3A0A0B4J271 114 aa5.21□□□□□ -1.58
SMARCE1-211ENST00000493660 SDHAF1A6NFY7 115 aa5.21□□□□□ -1.58
SMARCE1-211ENST00000493660 SPRY2O43597 315 aa5.21□□□□□ -1.58
SMARCE1-211ENST00000493660 GAS8-AS1O95177 125 aa5.21□□□□□ -1.58
SMARCE1-211ENST00000493660 RBMY1A1P0DJD3 496 aaKnown RBP5.21□□□□□ -1.58
SMARCE1-211ENST00000493660 RBMY1CP0DJD4 496 aa5.21□□□□□ -1.58
SMARCE1-211ENST00000493660 RBMY1FQ15415 496 aaKnown RBP5.21□□□□□ -1.58
SMARCE1-211ENST00000493660 KRTAP9-2Q9BYQ4 174 aa5.21□□□□□ -1.58
SMARCE1-211ENST00000493660 EGFEM1PQ0D2K5 195 aa5.2□□□□□ -1.58
SMARCE1-211ENST00000493660 FAM222AQ5U5X8 452 aa5.2□□□□□ -1.58
SMARCE1-211ENST00000493660 SMIM2Q9BVW6 85 aa5.2□□□□□ -1.58
SMARCE1-211ENST00000493660 ATRQ13535 2644 aa5.2□□□□□ -1.58
SMARCE1-211ENST00000493660 IGHV4-4A0A075B6R2 117 aa5.2□□□□□ -1.58
SMARCE1-211ENST00000493660 TRAV8-3A0A0A6YYJ7 113 aa5.2□□□□□ -1.58
SMARCE1-211ENST00000493660 BCE1O60756 84 aa5.2□□□□□ -1.58
SMARCE1-211ENST00000493660 GATA1P15976 413 aaPredicted RBP5.2□□□□□ -1.58
SMARCE1-211ENST00000493660 DAZ4Q86SG3 579 aaKnown RBP5.2□□□□□ -1.58
SMARCE1-211ENST00000493660 C14orf178Q8N769 122 aaPredicted RBP5.2□□□□□ -1.58
SMARCE1-211ENST00000493660 SORL1Q92673 2214 aa5.19□□□□□ -1.58
SMARCE1-211ENST00000493660 KRTAP9-6A0A140TA67 174 aa5.19□□□□□ -1.58
SMARCE1-211ENST00000493660 LEPROTO15243 131 aa5.19□□□□□ -1.58
SMARCE1-211ENST00000493660 XCL1P47992 114 aa5.19□□□□□ -1.58
SMARCE1-211ENST00000493660 TSPEAR-AS2P59090 65 aa5.19□□□□□ -1.58
SMARCE1-211ENST00000493660 CLEC2BQ92478 149 aa5.19□□□□□ -1.58
SMARCE1-211ENST00000493660 XCL2Q9UBD3 114 aa5.19□□□□□ -1.58
SMARCE1-211ENST00000493660 TENM1Q9UKZ4 2725 aa5.19□□□□□ -1.58
SMARCE1-211ENST00000493660 IGLV4-69A0A075B6H9 119 aa5.18□□□□□ -1.58
SMARCE1-211ENST00000493660 PLAC8L1A1L4L8 177 aa5.18□□□□□ -1.58
SMARCE1-211ENST00000493660 NXPH4O95158 308 aa5.18□□□□□ -1.58
SMARCE1-211ENST00000493660 S100A4P26447 101 aaKnown RBP5.18□□□□□ -1.58
SMARCE1-211ENST00000493660 WFDC10AQ9H1F0 79 aa5.18□□□□□ -1.58
SMARCE1-211ENST00000493660 IGHV3-16A0A0C4DH30 117 aa5.18□□□□□ -1.58
SMARCE1-211ENST00000493660 H7BZZ5 65 aa5.18□□□□□ -1.58
SMARCE1-211ENST00000493660 I3L3M4 83 aa5.18□□□□□ -1.58
SMARCE1-211ENST00000493660 PRSS2P07478 247 aa5.18□□□□□ -1.58
SMARCE1-211ENST00000493660 RNASE3P12724 160 aaKnown RBP5.18□□□□□ -1.58
SMARCE1-211ENST00000493660 TRBV7-6A0A0J9YX20 115 aa5.17□□□□□ -1.58
SMARCE1-211ENST00000493660 GNRH2O43555 120 aa5.17□□□□□ -1.58
SMARCE1-211ENST00000493660 PIK3CD-AS1Q5SR53 167 aa5.17□□□□□ -1.58
SMARCE1-211ENST00000493660 MSRB1Q9NZV6 116 aa5.17□□□□□ -1.58
SMARCE1-211ENST00000493660 UBE2D4Q9Y2X8 147 aa5.17□□□□□ -1.58
SMARCE1-211ENST00000493660 GHRHP01286 108 aa5.17□□□□□ -1.58
SMARCE1-211ENST00000493660 GIG44P09565 113 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms