RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 A0A1B0GUT8 65 aa6.9□□□□□ -1.3
CACNA1C-228ENST00000492150 M0QXV9 152 aa6.9□□□□□ -1.3
CACNA1C-228ENST00000492150 TSPAN13O95857 204 aa6.9□□□□□ -1.3
CACNA1C-228ENST00000492150 CFC1BP0CG36 223 aa6.9□□□□□ -1.3
CACNA1C-228ENST00000492150 UBE2BP63146 152 aa6.9□□□□□ -1.3
CACNA1C-228ENST00000492150 TMEM241Q24JQ0 296 aa6.9□□□□□ -1.3
CACNA1C-228ENST00000492150 RGS21Q2M5E4 152 aa6.9□□□□□ -1.3
CACNA1C-228ENST00000492150 CT83Q5H943 113 aa6.9□□□□□ -1.3
CACNA1C-228ENST00000492150 HIGD1CA8MV81 97 aa6.89□□□□□ -1.31
CACNA1C-228ENST00000492150 TAGLN2P37802 199 aaKnown RBP6.89□□□□□ -1.31
CACNA1C-228ENST00000492150 SUMO2P61956 95 aaKnown RBP6.89□□□□□ -1.31
CACNA1C-228ENST00000492150 BORCS7Q96B45 105 aa6.89□□□□□ -1.31
CACNA1C-228ENST00000492150 KIAA0087Q14695 138 aa6.88□□□□□ -1.31
CACNA1C-228ENST00000492150 KIR2DL4Q99706 377 aa6.88□□□□□ -1.31
CACNA1C-228ENST00000492150 BATF3Q9NR55 127 aa6.88□□□□□ -1.31
CACNA1C-228ENST00000492150 TMEM250H0YL14 139 aa6.87□□□□□ -1.31
CACNA1C-228ENST00000492150 ZNF861PO60384 105 aa6.87□□□□□ -1.31
CACNA1C-228ENST00000492150 RPL39P62891 51 aaKnown RBP6.87□□□□□ -1.31
CACNA1C-228ENST00000492150 C9orf129Q5T035 196 aaKnown RBP6.87□□□□□ -1.31
CACNA1C-228ENST00000492150 TMEM18Q96B42 140 aa6.87□□□□□ -1.31
CACNA1C-228ENST00000492150 PPP1R17O96001 155 aa6.86□□□□□ -1.31
CACNA1C-228ENST00000492150 A0A087X002 238 aa6.85□□□□□ -1.31
CACNA1C-228ENST00000492150 PPP1R2P9O14990 202 aa6.85□□□□□ -1.31
CACNA1C-228ENST00000492150 CRYGAP11844 174 aa6.85□□□□□ -1.31
CACNA1C-228ENST00000492150 TPRXLQ17RH7 258 aa6.85□□□□□ -1.31
CACNA1C-228ENST00000492150 CDIP1Q9H305 208 aa6.85□□□□□ -1.31
CACNA1C-228ENST00000492150 TRBV30A0A0K0K1B3 111 aa6.84□□□□□ -1.31
CACNA1C-228ENST00000492150 NDUFC2-KCTD14E9PQ53 114 aa6.84□□□□□ -1.31
CACNA1C-228ENST00000492150 LORP23490 312 aaPredicted RBP6.84□□□□□ -1.31
CACNA1C-228ENST00000492150 MRPS36P82909 103 aaKnown RBP6.84□□□□□ -1.31
CACNA1C-228ENST00000492150 MRPL51Q4U2R6 128 aaKnown RBP6.84□□□□□ -1.31
CACNA1C-228ENST00000492150 C2orf82Q6UX34 121 aa6.84□□□□□ -1.31
CACNA1C-228ENST00000492150 IFITM10A6NMD0 228 aa6.83□□□□□ -1.32
CACNA1C-228ENST00000492150 RPL32P62910 135 aaKnown RBP6.83□□□□□ -1.32
CACNA1C-228ENST00000492150 RIGQ13278 110 aa6.83□□□□□ -1.32
CACNA1C-228ENST00000492150 FAM104BQ5XKR9 115 aa6.83□□□□□ -1.32
CACNA1C-228ENST00000492150 LINC01551Q86U37 167 aa6.83□□□□□ -1.32
CACNA1C-228ENST00000492150 C20orf78Q9BR46 151 aa6.83□□□□□ -1.32
CACNA1C-228ENST00000492150 OSTCQ9NRP0 149 aa6.83□□□□□ -1.32
CACNA1C-228ENST00000492150 SPANXA1Q9NS26 97 aa6.83□□□□□ -1.32
CACNA1C-228ENST00000492150 SSPOA2VEC9 5147 aa6.82□□□□□ -1.32
CACNA1C-228ENST00000492150 TRBV24-1A0A075B6N3 115 aa6.82□□□□□ -1.32
CACNA1C-228ENST00000492150 NUPR1O60356 82 aa6.82□□□□□ -1.32
CACNA1C-228ENST00000492150 CEBPGP53567 150 aa6.82□□□□□ -1.32
CACNA1C-228ENST00000492150 HBBP68871 147 aa6.82□□□□□ -1.32
CACNA1C-228ENST00000492150 SLC51BQ86UW2 128 aa6.82□□□□□ -1.32
CACNA1C-228ENST00000492150 V9GYV3 84 aa6.82□□□□□ -1.32
CACNA1C-228ENST00000492150 TGIF2-C20orf24A0A0A6YYL0 155 aa6.81□□□□□ -1.32
CACNA1C-228ENST00000492150 TYMSOSQ8TAI1 123 aa6.81□□□□□ -1.32
CACNA1C-228ENST00000492150 SMIM7Q9BQ49 75 aa6.81□□□□□ -1.32
CACNA1C-228ENST00000492150 CTDSP1Q9GZU7 261 aa6.81□□□□□ -1.32
CACNA1C-228ENST00000492150 C22orf24Q9Y442 160 aa6.81□□□□□ -1.32
CACNA1C-228ENST00000492150 LINC00862A6NCI5 91 aa6.8□□□□□ -1.32
CACNA1C-228ENST00000492150 TCAPO15273 167 aa6.8□□□□□ -1.32
CACNA1C-228ENST00000492150 TNFRSF6BO95407 300 aa6.8□□□□□ -1.32
CACNA1C-228ENST00000492150 LINC00242Q5T6M2 205 aa6.8□□□□□ -1.32
CACNA1C-228ENST00000492150 PACRGQ96M98 296 aaPredicted RBP6.8□□□□□ -1.32
CACNA1C-228ENST00000492150 RETNLBQ9BQ08 111 aa6.8□□□□□ -1.32
CACNA1C-228ENST00000492150 SMIM2Q9BVW6 85 aa6.8□□□□□ -1.32
CACNA1C-228ENST00000492150 CKS2P33552 79 aa6.79□□□□□ -1.32
CACNA1C-228ENST00000492150 LINC00469Q8N7U9 141 aa6.79□□□□□ -1.32
CACNA1C-228ENST00000492150 SYNE2Q8WXH0 6885 aaKnown RBP6.78□□□□□ -1.32
CACNA1C-228ENST00000492150 ZNF727A8MUV8 499 aa6.78□□□□□ -1.32
CACNA1C-228ENST00000492150 KRTAP13-2Q52LG2 175 aa6.78□□□□□ -1.32
CACNA1C-228ENST00000492150 LCE2CQ5TA81 110 aa6.78□□□□□ -1.32
CACNA1C-228ENST00000492150 ANAPC11Q9NYG5 84 aa6.78□□□□□ -1.32
CACNA1C-228ENST00000492150 IGLV4-3A0A075B6K6 122 aa6.77□□□□□ -1.33
CACNA1C-228ENST00000492150 BCE1O60756 84 aa6.77□□□□□ -1.33
CACNA1C-228ENST00000492150 RPL28P46779 137 aaKnown RBP6.77□□□□□ -1.33
CACNA1C-228ENST00000492150 BLOC1S1P78537 153 aa6.77□□□□□ -1.33
CACNA1C-228ENST00000492150 FAM74A3Q4VXF1 159 aa6.77□□□□□ -1.33
CACNA1C-228ENST00000492150 LBHQ53QV2 105 aaPredicted RBP6.77□□□□□ -1.33
CACNA1C-228ENST00000492150 LINC01561Q8N1V8 128 aa6.77□□□□□ -1.33
CACNA1C-228ENST00000492150 XAGE1AQ9HD64 81 aa6.77□□□□□ -1.33
CACNA1C-228ENST00000492150 NAT8BQ9UHF3 227 aa6.77□□□□□ -1.33
CACNA1C-228ENST00000492150 FCGBPQ9Y6R7 5405 aaPredicted RBP6.76□□□□□ -1.33
CACNA1C-228ENST00000492150 D6R8Y8 96 aa6.76□□□□□ -1.33
CACNA1C-228ENST00000492150 NPYP01303 97 aa6.76□□□□□ -1.33
CACNA1C-228ENST00000492150 KRTAP10-6P60371 365 aaPredicted RBP6.76□□□□□ -1.33
CACNA1C-228ENST00000492150 MT1HP80294 61 aa6.76□□□□□ -1.33
CACNA1C-228ENST00000492150 PYGO1Q9Y3Y4 419 aa6.76□□□□□ -1.33
CACNA1C-228ENST00000492150 SMIM27A0A1W2PRY6 76 aa6.75□□□□□ -1.33
CACNA1C-228ENST00000492150 SRP19P09132 144 aaKnown RBP6.75□□□□□ -1.33
CACNA1C-228ENST00000492150 IFI27P40305 119 aaPredicted RBP6.75□□□□□ -1.33
CACNA1C-228ENST00000492150 ALKAL2Q6UX46 152 aa6.75□□□□□ -1.33
CACNA1C-228ENST00000492150 TCTE3Q8IZS6 198 aa6.75□□□□□ -1.33
CACNA1C-228ENST00000492150 EIF5A2Q9GZV4 153 aaKnown RBP6.75□□□□□ -1.33
CACNA1C-228ENST00000492150 TP73-AS1Q9UF72 201 aa6.75□□□□□ -1.33
CACNA1C-228ENST00000492150 USH2AO75445 5202 aa6.75□□□□□ -1.33
CACNA1C-228ENST00000492150 IGLV7-46A0A075B6I9 117 aa6.74□□□□□ -1.33
CACNA1C-228ENST00000492150 ZC2HC1BQ5TFG8 222 aa6.74□□□□□ -1.33
CACNA1C-228ENST00000492150 MRPL55Q7Z7F7 128 aaKnown RBP6.74□□□□□ -1.33
CACNA1C-228ENST00000492150 TMEM141Q96I45 108 aa6.74□□□□□ -1.33
CACNA1C-228ENST00000492150 KRTAP4-1Q9BYQ7 146 aa6.74□□□□□ -1.33
CACNA1C-228ENST00000492150 A0A1B0GW15 77 aa6.73□□□□□ -1.33
CACNA1C-228ENST00000492150 CKS1BP61024 79 aa6.73□□□□□ -1.33
CACNA1C-228ENST00000492150 RPL23P62829 140 aaKnown RBP6.73□□□□□ -1.33
CACNA1C-228ENST00000492150 ASB16-AS1Q495Z4 193 aa6.73□□□□□ -1.33
CACNA1C-228ENST00000492150 Q6ZN92 141 aa6.73□□□□□ -1.33
CACNA1C-228ENST00000492150 LINC00173Q6ZV60 143 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms