RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 C5orf38Q86SI9 138 aa9.75□□□□□ -0.85
SS18L1-204ENST00000491916 LINC00526Q96FQ7 95 aa9.75□□□□□ -0.85
SS18L1-204ENST00000491916 SMCO4Q9NRQ5 59 aa9.75□□□□□ -0.85
SS18L1-204ENST00000491916 A0A096LNJ9 63 aa9.74□□□□□ -0.85
SS18L1-204ENST00000491916 COX7A2LO14548 114 aa9.74□□□□□ -0.85
SS18L1-204ENST00000491916 UBE2D1P51668 147 aa9.74□□□□□ -0.85
SS18L1-204ENST00000491916 LINC00242Q5T6M2 205 aa9.74□□□□□ -0.85
SS18L1-204ENST00000491916 SRRM2Q9UQ35 2752 aaKnown RBP9.74□□□□□ -0.85
SS18L1-204ENST00000491916 SCXQ7RTU7 201 aa9.73□□□□□ -0.85
SS18L1-204ENST00000491916 TIMM17AQ99595 171 aa9.73□□□□□ -0.85
SS18L1-204ENST00000491916 SMR3BP02814 79 aaPredicted RBP9.72□□□□□ -0.85
SS18L1-204ENST00000491916 CIRBPQ14011 172 aaKnown RBP9.72□□□□□ -0.85
SS18L1-204ENST00000491916 TEX43Q6ZNM6 134 aa9.72□□□□□ -0.85
SS18L1-204ENST00000491916 FAM19A3Q7Z5A8 133 aa9.72□□□□□ -0.85
SS18L1-204ENST00000491916 CHAC1Q9BUX1 264 aa9.72□□□□□ -0.85
SS18L1-204ENST00000491916 AP5S1Q9NUS5 200 aa9.72□□□□□ -0.85
SS18L1-204ENST00000491916 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.72□□□□□ -0.85
SS18L1-204ENST00000491916 FA2HQ7L5A8 372 aa9.71□□□□□ -0.86
SS18L1-204ENST00000491916 ERASQ7Z444 233 aa9.71□□□□□ -0.86
SS18L1-204ENST00000491916 CIRBP-AS1Q8TBR5 109 aa9.71□□□□□ -0.86
SS18L1-204ENST00000491916 IGHV3-64A0A075B6Q5 118 aa9.7□□□□□ -0.86
SS18L1-204ENST00000491916 COLCA2A8K830 154 aa9.7□□□□□ -0.86
SS18L1-204ENST00000491916 LINC00614P0C842 121 aa9.7□□□□□ -0.86
SS18L1-204ENST00000491916 G0S2P27469 103 aa9.7□□□□□ -0.86
SS18L1-204ENST00000491916 VCX2Q9H322 139 aa9.7□□□□□ -0.86
SS18L1-204ENST00000491916 PKHD1L1Q86WI1 4243 aa9.7□□□□□ -0.86
SS18L1-204ENST00000491916 IGLV4-69A0A075B6H9 119 aa9.69□□□□□ -0.86
SS18L1-204ENST00000491916 A0A087WZ39 114 aa9.69□□□□□ -0.86
SS18L1-204ENST00000491916 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.69□□□□□ -0.86
SS18L1-204ENST00000491916 MALP21145 153 aa9.69□□□□□ -0.86
SS18L1-204ENST00000491916 SCGB3A1Q96QR1 104 aa9.69□□□□□ -0.86
SS18L1-204ENST00000491916 Q6ZN92 141 aa9.68□□□□□ -0.86
SS18L1-204ENST00000491916 ZNF561-AS1K7EIQ3 104 aa9.67□□□□□ -0.86
SS18L1-204ENST00000491916 CHTF8P0CG12 524 aa9.67□□□□□ -0.86
SS18L1-204ENST00000491916 KIAA0087Q14695 138 aa9.67□□□□□ -0.86
SS18L1-204ENST00000491916 Q6ZRU5 148 aa9.67□□□□□ -0.86
SS18L1-204ENST00000491916 C2orf88Q9BSF0 95 aa9.67□□□□□ -0.86
SS18L1-204ENST00000491916 LINC01549A6NIU2 74 aa9.66□□□□□ -0.86
SS18L1-204ENST00000491916 TRGC2P03986 189 aa9.66□□□□□ -0.86
SS18L1-204ENST00000491916 SYCNQ0VAF6 134 aa9.66□□□□□ -0.86
SS18L1-204ENST00000491916 PMCHL1Q16048 86 aa9.66□□□□□ -0.86
SS18L1-204ENST00000491916 PDZD11Q5EBL8 140 aa9.66□□□□□ -0.86
SS18L1-204ENST00000491916 Q5VSD8 79 aa9.66□□□□□ -0.86
SS18L1-204ENST00000491916 OR10D4PQ8NGN7 298 aa9.66□□□□□ -0.86
SS18L1-204ENST00000491916 C2orf48Q96LS8 159 aa9.66□□□□□ -0.86
SS18L1-204ENST00000491916 CARD19Q96LW7 228 aa9.66□□□□□ -0.86
SS18L1-204ENST00000491916 MYCBP2O75592 4640 aa9.65□□□□□ -0.86
SS18L1-204ENST00000491916 A0A0J9YXV3 536 aa9.65□□□□□ -0.86
SS18L1-204ENST00000491916 EPM2AB3EWF7 344 aa9.65□□□□□ -0.86
SS18L1-204ENST00000491916 SCO1O75880 301 aa9.65□□□□□ -0.86
SS18L1-204ENST00000491916 APOMO95445 188 aa9.65□□□□□ -0.86
SS18L1-204ENST00000491916 SPAG11BQ08648 103 aa9.65□□□□□ -0.86
SS18L1-204ENST00000491916 PAPPA-AS1Q5QFB9 102 aa9.65□□□□□ -0.86
SS18L1-204ENST00000491916 LINC01561Q8N1V8 128 aa9.65□□□□□ -0.86
SS18L1-204ENST00000491916 SPACA4Q8TDM5 124 aa9.65□□□□□ -0.86
SS18L1-204ENST00000491916 ORAOV1Q8WV07 137 aa9.65□□□□□ -0.86
SS18L1-204ENST00000491916 CST9LQ9H4G1 147 aa9.65□□□□□ -0.86
SS18L1-204ENST00000491916 KRTAP10-4P60372 401 aaPredicted RBP9.64□□□□□ -0.87
SS18L1-204ENST00000491916 A0A096LNI7 61 aa9.63□□□□□ -0.87
SS18L1-204ENST00000491916 HBDP02042 147 aa9.63□□□□□ -0.87
SS18L1-204ENST00000491916 LINC00310P59036 64 aa9.63□□□□□ -0.87
SS18L1-204ENST00000491916 C10orf25Q5T742 122 aa9.63□□□□□ -0.87
SS18L1-204ENST00000491916 CDKN2A-AS1Q9UH64 79 aa9.63□□□□□ -0.87
SS18L1-204ENST00000491916 RAB5BP61020 215 aa9.62□□□□□ -0.87
SS18L1-204ENST00000491916 LINC00528Q8N1L1 170 aa9.62□□□□□ -0.87
SS18L1-204ENST00000491916 CAMK2N2Q96S95 79 aa9.62□□□□□ -0.87
SS18L1-204ENST00000491916 IGLV5-45A0A087WSX0 123 aa9.61□□□□□ -0.87
SS18L1-204ENST00000491916 A0A087WYN8 130 aa9.61□□□□□ -0.87
SS18L1-204ENST00000491916 TINCRA0A1B0GVN0 87 aa9.61□□□□□ -0.87
SS18L1-204ENST00000491916 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.61□□□□□ -0.87
SS18L1-204ENST00000491916 HERVK_113P63121 156 aa9.61□□□□□ -0.87
SS18L1-204ENST00000491916 PMVKQ15126 192 aa9.61□□□□□ -0.87
SS18L1-204ENST00000491916 UNQ6190/PRO20217Q6UXQ8 127 aa9.61□□□□□ -0.87
SS18L1-204ENST00000491916 CHCHD1Q96BP2 118 aaKnown RBP9.61□□□□□ -0.87
SS18L1-204ENST00000491916 PLAC8Q9NZF1 115 aa9.61□□□□□ -0.87
SS18L1-204ENST00000491916 F8WDY8 70 aa9.6□□□□□ -0.87
SS18L1-204ENST00000491916 SEC11AP67812 179 aa9.6□□□□□ -0.87
SS18L1-204ENST00000491916 RNF151Q2KHN1 245 aa9.6□□□□□ -0.87
SS18L1-204ENST00000491916 MRPL35Q9NZE8 188 aaKnown RBP9.6□□□□□ -0.87
SS18L1-204ENST00000491916 FAM229AH3BQW9 127 aa9.59□□□□□ -0.87
SS18L1-204ENST00000491916 IGKV2-24A0A0C4DH68 120 aa9.58□□□□□ -0.88
SS18L1-204ENST00000491916 NUPR1O60356 82 aa9.58□□□□□ -0.88
SS18L1-204ENST00000491916 C2orf82Q6UX34 121 aa9.58□□□□□ -0.88
SS18L1-204ENST00000491916 C6orf48Q9UBA6 75 aa9.58□□□□□ -0.88
SS18L1-204ENST00000491916 FLG2Q5D862 2391 aaPredicted RBP9.57□□□□□ -0.88
SS18L1-204ENST00000491916 FAT3Q8TDW7 4589 aa9.57□□□□□ -0.88
SS18L1-204ENST00000491916 LOC107984640A0A0U1RRK4 108 aa9.57□□□□□ -0.88
SS18L1-204ENST00000491916 SMIM1B2RUZ4 78 aa9.57□□□□□ -0.88
SS18L1-204ENST00000491916 IGLC3P0DOY3 106 aa9.57□□□□□ -0.88
SS18L1-204ENST00000491916 PTTG1IPP53801 180 aa9.57□□□□□ -0.88
SS18L1-204ENST00000491916 MAJINQ3KP22 176 aa9.57□□□□□ -0.88
SS18L1-204ENST00000491916 GEMIN7Q9H840 131 aaKnown RBP9.57□□□□□ -0.88
SS18L1-204ENST00000491916 LRP1Q07954 4544 aaKnown RBP9.56□□□□□ -0.88
SS18L1-204ENST00000491916 NDUFA1O15239 70 aa9.56□□□□□ -0.88
SS18L1-204ENST00000491916 ATP5LO75964 103 aa9.56□□□□□ -0.88
SS18L1-204ENST00000491916 FAM19A2Q8N3H0 131 aa9.56□□□□□ -0.88
SS18L1-204ENST00000491916 LINC00469Q8N7U9 141 aa9.56□□□□□ -0.88
SS18L1-204ENST00000491916 SERF1AO75920 110 aa9.55□□□□□ -0.88
SS18L1-204ENST00000491916 TLX1NBP0CAT3 122 aa9.55□□□□□ -0.88
SS18L1-204ENST00000491916 BAGE3Q86Y29 109 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms