RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 IGHV3-30P01768 117 aa0.4□□□□□ -2.35
VTA1-204ENST00000491881 IGHV3-30-5P0DP03 117 aa0.4□□□□□ -2.35
VTA1-204ENST00000491881 CAV3P56539 151 aa0.4□□□□□ -2.35
VTA1-204ENST00000491881 RBM3P98179 157 aaKnown RBP0.4□□□□□ -2.35
VTA1-204ENST00000491881 DEFB112Q30KQ8 113 aa0.4□□□□□ -2.35
VTA1-204ENST00000491881 KRTAP8-1Q8IUC2 63 aa0.4□□□□□ -2.35
VTA1-204ENST00000491881 PRELID3AQ96N28 172 aa0.4□□□□□ -2.35
VTA1-204ENST00000491881 CIB3Q96Q77 187 aaPredicted RBP0.4□□□□□ -2.35
VTA1-204ENST00000491881 CCDC32Q9BV29 185 aa0.4□□□□□ -2.35
VTA1-204ENST00000491881 BBIP1A8MTZ0 92 aa0.39□□□□□ -2.35
VTA1-204ENST00000491881 H7BYZ3 331 aa0.39□□□□□ -2.35
VTA1-204ENST00000491881 BCL2P10415 239 aa0.39□□□□□ -2.35
VTA1-204ENST00000491881 S100A11P31949 105 aa0.39□□□□□ -2.35
VTA1-204ENST00000491881 NCMAPQ5T1S8 102 aa0.39□□□□□ -2.35
VTA1-204ENST00000491881 DEFB108BQ8NET1 73 aa0.39□□□□□ -2.35
VTA1-204ENST00000491881 CLEC2BQ92478 149 aa0.39□□□□□ -2.35
VTA1-204ENST00000491881 FAM103A1Q9BTL3 118 aaKnown RBP0.39□□□□□ -2.35
VTA1-204ENST00000491881 DPH3P1Q9H4G8 78 aa0.39□□□□□ -2.35
VTA1-204ENST00000491881 LOC107984156A0A0G2JMH3 177 aa0.38□□□□□ -2.35
VTA1-204ENST00000491881 SAA1P0DJI8 122 aaPredicted RBP0.38□□□□□ -2.35
VTA1-204ENST00000491881 MAXP61244 160 aa0.38□□□□□ -2.35
VTA1-204ENST00000491881 SNRPD3P62318 126 aaKnown RBP0.38□□□□□ -2.35
VTA1-204ENST00000491881 QRFPP83859 136 aa0.38□□□□□ -2.35
VTA1-204ENST00000491881 TFAMQ00059 246 aaKnown RBP0.38□□□□□ -2.35
VTA1-204ENST00000491881 C3orf62Q6ZUJ4 267 aa0.38□□□□□ -2.35
VTA1-204ENST00000491881 LINC00305Q7Z4B0 112 aa0.38□□□□□ -2.35
VTA1-204ENST00000491881 STX12Q86Y82 276 aa0.38□□□□□ -2.35
VTA1-204ENST00000491881 ARL17AQ8IVW1 177 aa0.38□□□□□ -2.35
VTA1-204ENST00000491881 TMEM229BQ8NBD8 167 aa0.38□□□□□ -2.35
VTA1-204ENST00000491881 TSKUQ8WUA8 353 aa0.38□□□□□ -2.35
VTA1-204ENST00000491881 LPAR5Q9H1C0 372 aa0.38□□□□□ -2.35
VTA1-204ENST00000491881 NBDYA0A0U1RRE5 68 aa0.37□□□□□ -2.35
VTA1-204ENST00000491881 TFF1P04155 84 aa0.37□□□□□ -2.35
VTA1-204ENST00000491881 GYPBP06028 91 aa0.37□□□□□ -2.35
VTA1-204ENST00000491881 RPS3P23396 243 aaKnown RBP eCLIP0.37□□□□□ -2.35
VTA1-204ENST00000491881 XAF1Q6GPH4 301 aa0.37□□□□□ -2.35
VTA1-204ENST00000491881 PCBD2Q9H0N5 130 aa0.37□□□□□ -2.35
VTA1-204ENST00000491881 ATPIF1Q9UII2 106 aa0.37□□□□□ -2.35
VTA1-204ENST00000491881 A0A1W2PPB8 328 aa0.36□□□□□ -2.35
VTA1-204ENST00000491881 A0A1W2PRS3 328 aa0.36□□□□□ -2.35
VTA1-204ENST00000491881 PRORSD1PA6NEY8 169 aa0.36□□□□□ -2.35
VTA1-204ENST00000491881 KIR3DP1A8MWS1 328 aa0.36□□□□□ -2.35
VTA1-204ENST00000491881 TNFP01375 233 aa0.36□□□□□ -2.35
VTA1-204ENST00000491881 TMEM78Q5T7P6 136 aa0.36□□□□□ -2.35
VTA1-204ENST00000491881 HRCT1Q6UXD1 115 aa0.36□□□□□ -2.35
VTA1-204ENST00000491881 IZUMO2Q6UXV1 221 aa0.36□□□□□ -2.35
VTA1-204ENST00000491881 TCTEX1D1Q8N7M0 179 aa0.36□□□□□ -2.35
VTA1-204ENST00000491881 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.36□□□□□ -2.35
VTA1-204ENST00000491881 LXNQ9BS40 222 aa0.36□□□□□ -2.35
VTA1-204ENST00000491881 FKBP11Q9NYL4 201 aa0.36□□□□□ -2.35
VTA1-204ENST00000491881 DSPPQ9NZW4 1301 aa0.36□□□□□ -2.35
VTA1-204ENST00000491881 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.35□□□□□ -2.35
VTA1-204ENST00000491881 TRAV13-1A0A0B4J241 112 aa0.35□□□□□ -2.35
VTA1-204ENST00000491881 TRBV27A0A0K0K1C4 114 aa0.35□□□□□ -2.35
VTA1-204ENST00000491881 LOC107986453A0A1B0GWG9 222 aa0.35□□□□□ -2.35
VTA1-204ENST00000491881 E7EQ34 232 aa0.35□□□□□ -2.35
VTA1-204ENST00000491881 DNAJB13P59910 316 aa0.35□□□□□ -2.35
VTA1-204ENST00000491881 CSAG1Q6PB30 78 aa0.35□□□□□ -2.35
VTA1-204ENST00000491881 C10orf99Q6UWK7 81 aa0.35□□□□□ -2.35
VTA1-204ENST00000491881 A0A1W2PRE2 83 aa0.34□□□□□ -2.36
VTA1-204ENST00000491881 H3BMG7 143 aa0.34□□□□□ -2.36
VTA1-204ENST00000491881 FAM107AO95990 144 aa0.34□□□□□ -2.36
VTA1-204ENST00000491881 IFNA21P01568 189 aa0.34□□□□□ -2.36
VTA1-204ENST00000491881 IFNA17P01571 189 aa0.34□□□□□ -2.36
VTA1-204ENST00000491881 EVI2AP22794 236 aa0.34□□□□□ -2.36
VTA1-204ENST00000491881 DCDP81605 110 aaKnown RBP0.34□□□□□ -2.36
VTA1-204ENST00000491881 SPINK13Q1W4C9 94 aa0.34□□□□□ -2.36
VTA1-204ENST00000491881 MPC1Q9Y5U8 109 aa0.34□□□□□ -2.36
VTA1-204ENST00000491881 UQCRHP07919 91 aa0.33□□□□□ -2.36
VTA1-204ENST00000491881 SRP9P49458 86 aaKnown RBP0.33□□□□□ -2.36
VTA1-204ENST00000491881 LSM3P62310 102 aaKnown RBP0.33□□□□□ -2.36
VTA1-204ENST00000491881 CCSMST1Q4G0I0 132 aa0.33□□□□□ -2.36
VTA1-204ENST00000491881 GLYATL3Q5SZD4 288 aa0.33□□□□□ -2.36
VTA1-204ENST00000491881 TRAPPC2LQ9UL33 140 aa0.33□□□□□ -2.36
VTA1-204ENST00000491881 MED31Q9Y3C7 131 aa0.33□□□□□ -2.36
VTA1-204ENST00000491881 A0A087WTM6 91 aa0.32□□□□□ -2.36
VTA1-204ENST00000491881 GTF2A1P52655 376 aaPredicted RBP0.32□□□□□ -2.36
VTA1-204ENST00000491881 UBE2DNLQ8IWF7 75 aa0.32□□□□□ -2.36
VTA1-204ENST00000491881 MORN4Q8NDC4 146 aa0.32□□□□□ -2.36
VTA1-204ENST00000491881 THEM6Q8WUY1 208 aa0.32□□□□□ -2.36
VTA1-204ENST00000491881 MRPL36Q9P0J6 103 aaKnown RBP0.32□□□□□ -2.36
VTA1-204ENST00000491881 V9GYQ6 96 aa0.32□□□□□ -2.36
VTA1-204ENST00000491881 A0A1B0GV72 72 aa0.31□□□□□ -2.36
VTA1-204ENST00000491881 IFITM5A6NNB3 132 aa0.31□□□□□ -2.36
VTA1-204ENST00000491881 SLC25A4P12235 298 aa0.31□□□□□ -2.36
VTA1-204ENST00000491881 RPL7P18124 248 aaKnown RBP0.31□□□□□ -2.36
VTA1-204ENST00000491881 ETV6P41212 452 aa0.31□□□□□ -2.36
VTA1-204ENST00000491881 BLCAPP62952 87 aa0.31□□□□□ -2.36
VTA1-204ENST00000491881 OR8J3Q8NGG0 315 aa0.31□□□□□ -2.36
VTA1-204ENST00000491881 OR51A4Q8NGJ6 313 aa0.31□□□□□ -2.36
VTA1-204ENST00000491881 LINC00208Q96KT6 92 aa0.31□□□□□ -2.36
VTA1-204ENST00000491881 C19orf12Q9NSK7 152 aa0.31□□□□□ -2.36
VTA1-204ENST00000491881 MRPL35Q9NZE8 188 aaKnown RBP0.31□□□□□ -2.36
VTA1-204ENST00000491881 TRBV7-6A0A0J9YX20 115 aa0.3□□□□□ -2.36
VTA1-204ENST00000491881 LOC107984640A0A0U1RRK4 108 aa0.3□□□□□ -2.36
VTA1-204ENST00000491881 TMEM189A5PLL7 270 aa0.3□□□□□ -2.36
VTA1-204ENST00000491881 M0QZK8 103 aa0.3□□□□□ -2.36
VTA1-204ENST00000491881 CDC42EP2O14613 210 aa0.3□□□□□ -2.36
VTA1-204ENST00000491881 EDF1O60869 148 aaKnown RBP0.3□□□□□ -2.36
VTA1-204ENST00000491881 FABP1P07148 127 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms