RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 LINC00242Q5T6M2 205 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 FAM222AQ5U5X8 452 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 TMEM61Q8N0U2 210 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 LINC01561Q8N1V8 128 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 Q8N2B8 174 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 C3orf22Q8N5N4 141 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 TMEM86BQ8N661 226 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 DAND5Q8N907 189 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 DEFB104AQ8WTQ1 72 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 CCL19Q99731 98 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 Q9H8V8 135 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 CDKN2A-AS1Q9UH64 79 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 FREM2Q5SZK8 3169 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 DOPEY2Q9Y3R5 2298 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 DMXL2Q8TDJ6 3036 aa1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 RP1L1Q8IWN7 2480 aaPredicted RBP1.43□□□□□ -2.18
SNRNP40-207ENST00000491106 PIEZO2Q9H5I5 2752 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 CACNA1HO95180 2353 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 SPTBN5Q9NRC6 3674 aaKnown RBP1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 EYSQ5T1H1 3165 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 IGHV3-64A0A075B6Q5 118 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 IGHV3OR16-12A0A075B7B8 117 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 IGHV4-30-2A0A087WSY4 118 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 IGHV3-73A0A0B4J1V6 119 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 SMIM9A6NGZ8 99 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 KNCNA6PVL3 124 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 IBA57-AS1B1ANH7 110 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 JMJD7-PLA2G4BH0Y9G9 81 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 C19orf84I3L1E1 186 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 TMEM256-PLSCR3K7ERE1 68 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 UBE2L6O14933 153 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 CDK2AP2O75956 126 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 RPL35AP18077 110 aaKnown RBP1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 LINC00158P58513 81 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 COX17Q14061 63 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 SS18Q15532 418 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 CEMP1Q6PRD7 247 aaPredicted RBP1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 LYPD5Q6UWN5 251 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 STHQ8IWL8 128 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 C1orf158Q8N1D5 194 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 LRRC75A-AS1Q8N1F1 130 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 Q8N377 158 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 LINC00612Q8N6U2 182 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 C11orf72Q8NBR9 251 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 MUC7Q8TAX7 377 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 LINC00526Q96FQ7 95 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 ZNF625Q96I27 306 aaPredicted RBP1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 OBSCN-AS1Q96MR7 158 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 CHCHD5Q9BSY4 110 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 TMEM243Q9BU79 118 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 Q9UF83 564 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 VPREB3Q9UKI3 123 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 CELA1Q9UNI1 258 aa1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 KLK5Q9Y337 293 aaPredicted RBP1.42□□□□□ -2.18
SNRNP40-207ENST00000491106 PTPRZ1P23471 2315 aaPredicted RBP1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 AKAP6Q13023 2319 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 EP300Q09472 2414 aaPredicted RBP1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 GPR179Q6PRD1 2367 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 A0A087WZ39 114 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 TRAV13-1A0A0B4J241 112 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 IGHV3OR16-9A0A0B4J2B5 98 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 TRBV10-3A0A0K0K1G6 114 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 IGKV2-29A2NJV5 120 aaPredicted RBP1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 A8MU10 97 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 A8MZ25 164 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 F5H768 121 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 CCDC179H3BU77 68 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 K7EQD1 137 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 CCL24O00175 119 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 ATOX1O00244 68 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 NDUFC2O95298 119 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 DNAL4O96015 105 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 INSP01308 110 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 CCKP06307 115 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 IGHV4-31P0DP07 118 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 CRYGAP11844 174 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 COX7CP15954 63 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 PDE6GP18545 87 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 RBMY1FQ15415 496 aaKnown RBP1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 TMEM95Q3KNT9 176 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 KRTAP5-4Q6L8H1 288 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 Q6ZRP5 223 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 NTM-AS1Q6ZSK4 140 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 KIR2DL5BQ8NHK3 375 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 COX7B2Q8TF08 81 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 C4orf3Q8WVX3 66 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 CLEC2BQ92478 149 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 ZNF702PQ9H963 129 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 SND1-IT1Q9HBX3 110 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 XCL2Q9UBD3 114 aa1.41□□□□□ -2.18
SNRNP40-207ENST00000491106 CR1P17927 2039 aa1.4□□□□□ -2.18
SNRNP40-207ENST00000491106 TRGV1A0A0A0MS02 117 aa1.4□□□□□ -2.19
SNRNP40-207ENST00000491106 TRBV6-8A0A0A6YYG3 113 aa1.4□□□□□ -2.19
SNRNP40-207ENST00000491106 TRGV4A0A0C4DH28 118 aa1.4□□□□□ -2.19
SNRNP40-207ENST00000491106 IGHV3-38A0A0C4DH36 116 aa1.4□□□□□ -2.19
SNRNP40-207ENST00000491106 A0A0U1RRA0 63 aa1.4□□□□□ -2.19
SNRNP40-207ENST00000491106 LOC107984640A0A0U1RRK4 108 aa1.4□□□□□ -2.19
SNRNP40-207ENST00000491106 LINC00959A0A1B0GUT2 108 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms