RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 TMEM263Q8WUH6 116 aaKnown RBP7.25□□□□□ -1.25
HDAC9-225ENST00000490851 IFI27L1Q96BM0 104 aa7.25□□□□□ -1.25
HDAC9-225ENST00000490851 LAMTOR3Q9UHA4 124 aa7.25□□□□□ -1.25
HDAC9-225ENST00000490851 FAM240AA0A1B0GVK7 77 aa7.25□□□□□ -1.25
HDAC9-225ENST00000490851 LINC01546A6NGU7 62 aa7.25□□□□□ -1.25
HDAC9-225ENST00000490851 PPP1R17O96001 155 aa7.25□□□□□ -1.25
HDAC9-225ENST00000490851 IGKCP01834 107 aa7.25□□□□□ -1.25
HDAC9-225ENST00000490851 C11orf45Q8TAV5 145 aa7.25□□□□□ -1.25
HDAC9-225ENST00000490851 LINC01600Q96MT4 127 aa7.25□□□□□ -1.25
HDAC9-225ENST00000490851 DSCR8Q96T75 97 aa7.25□□□□□ -1.25
HDAC9-225ENST00000490851 HHLA3Q9XRX5 114 aa7.25□□□□□ -1.25
HDAC9-225ENST00000490851 WFDC9Q8NEX5 89 aa7.23□□□□□ -1.25
HDAC9-225ENST00000490851 K7ERJ3 54 aa7.23□□□□□ -1.25
HDAC9-225ENST00000490851 PCP2Q8IVA1 136 aa7.23□□□□□ -1.25
HDAC9-225ENST00000490851 NHP2Q9NX24 153 aaKnown RBP7.23□□□□□ -1.25
HDAC9-225ENST00000490851 TCL1BO95988 128 aa7.22□□□□□ -1.25
HDAC9-225ENST00000490851 PRSS1P07477 247 aa7.22□□□□□ -1.25
HDAC9-225ENST00000490851 ORMDL2Q53FV1 153 aa7.22□□□□□ -1.25
HDAC9-225ENST00000490851 NEXN-AS1Q8NBZ9 246 aa7.22□□□□□ -1.25
HDAC9-225ENST00000490851 BRK1Q8WUW1 75 aa7.22□□□□□ -1.25
HDAC9-225ENST00000490851 C16orf74Q96GX8 76 aa7.22□□□□□ -1.25
HDAC9-225ENST00000490851 VCYO14598 125 aa7.22□□□□□ -1.25
HDAC9-225ENST00000490851 POLR2KP53803 58 aaKnown RBP7.22□□□□□ -1.25
HDAC9-225ENST00000490851 DEFB135Q30KP9 77 aa7.22□□□□□ -1.25
HDAC9-225ENST00000490851 SERP1Q9Y6X1 66 aa7.22□□□□□ -1.25
HDAC9-225ENST00000490851 TRGV2A0A075B6R0 118 aa7.21□□□□□ -1.25
HDAC9-225ENST00000490851 SMIM26A0A096LP01 95 aa7.21□□□□□ -1.25
HDAC9-225ENST00000490851 TRAV8-4A0A0B4J246 113 aa7.21□□□□□ -1.25
HDAC9-225ENST00000490851 PLAC8L1A1L4L8 177 aa7.21□□□□□ -1.25
HDAC9-225ENST00000490851 C2orf66Q6UXQ4 117 aa7.21□□□□□ -1.25
HDAC9-225ENST00000490851 DKK2Q9UBU2 259 aa7.21□□□□□ -1.25
HDAC9-225ENST00000490851 NBEAL1Q6ZS30 2694 aa7.21□□□□□ -1.25
HDAC9-225ENST00000490851 RPL39P62891 51 aaKnown RBP7.21□□□□□ -1.26
HDAC9-225ENST00000490851 ZFP2Q6ZN57 461 aa7.21□□□□□ -1.26
HDAC9-225ENST00000490851 PRR15Q8IV56 129 aa7.21□□□□□ -1.26
HDAC9-225ENST00000490851 SCGB3A1Q96QR1 104 aa7.21□□□□□ -1.26
HDAC9-225ENST00000490851 IGHV3-38A0A0C4DH36 116 aa7.2□□□□□ -1.26
HDAC9-225ENST00000490851 TRBV6-5A0A0K0K1A5 114 aa7.2□□□□□ -1.26
HDAC9-225ENST00000490851 TRBV27A0A0K0K1C4 114 aa7.2□□□□□ -1.26
HDAC9-225ENST00000490851 hADV29S1A0JD25 119 aa7.2□□□□□ -1.26
HDAC9-225ENST00000490851 ATOX1O00244 68 aa7.2□□□□□ -1.26
HDAC9-225ENST00000490851 DEFB4AO15263 64 aa7.2□□□□□ -1.26
HDAC9-225ENST00000490851 PIK3CD-AS1Q5SR53 167 aa7.2□□□□□ -1.26
HDAC9-225ENST00000490851 IGHV4-30-4P0DP06 118 aa7.19□□□□□ -1.26
HDAC9-225ENST00000490851 DEFB130BP0DP73 79 aa7.19□□□□□ -1.26
HDAC9-225ENST00000490851 DEFB130AP0DP74 79 aa7.19□□□□□ -1.26
HDAC9-225ENST00000490851 KRTAP10-11P60412 298 aa7.19□□□□□ -1.26
HDAC9-225ENST00000490851 DAZ2Q13117 558 aaKnown RBP7.19□□□□□ -1.26
HDAC9-225ENST00000490851 TOMM6Q96B49 74 aa7.19□□□□□ -1.26
HDAC9-225ENST00000490851 CMYA5Q8N3K9 4069 aa7.19□□□□□ -1.26
HDAC9-225ENST00000490851 H3BT86 120 aa7.19□□□□□ -1.26
HDAC9-225ENST00000490851 I3L3M4 83 aa7.19□□□□□ -1.26
HDAC9-225ENST00000490851 TSHBP01222 138 aa7.19□□□□□ -1.26
HDAC9-225ENST00000490851 CHAC1Q9BUX1 264 aa7.19□□□□□ -1.26
HDAC9-225ENST00000490851 MGAM2Q2M2H8 2515 aa7.18□□□□□ -1.26
HDAC9-225ENST00000490851 NPC2P61916 151 aa7.18□□□□□ -1.26
HDAC9-225ENST00000490851 LGALS9BQ3B8N2 356 aa7.18□□□□□ -1.26
HDAC9-225ENST00000490851 LGALS9CQ6DKI2 356 aa7.18□□□□□ -1.26
HDAC9-225ENST00000490851 DAZ4Q86SG3 579 aaKnown RBP7.18□□□□□ -1.26
HDAC9-225ENST00000490851 DAZ3Q9NR90 486 aaKnown RBP7.18□□□□□ -1.26
HDAC9-225ENST00000490851 K7EMI3 77 aa7.18□□□□□ -1.26
HDAC9-225ENST00000490851 CXCL5P42830 114 aa7.18□□□□□ -1.26
HDAC9-225ENST00000490851 APOC4P55056 127 aa7.18□□□□□ -1.26
HDAC9-225ENST00000490851 X6R8D5 127 aa7.18□□□□□ -1.26
HDAC9-225ENST00000490851 UBE2D3P61077 147 aa7.17□□□□□ -1.26
HDAC9-225ENST00000490851 UBE2D2P62837 147 aa7.17□□□□□ -1.26
HDAC9-225ENST00000490851 SLC25A29Q8N8R3 303 aa7.17□□□□□ -1.26
HDAC9-225ENST00000490851 MRPL35Q9NZE8 188 aaKnown RBP7.17□□□□□ -1.26
HDAC9-225ENST00000490851 COPS9Q8WXC6 57 aa7.16□□□□□ -1.26
HDAC9-225ENST00000490851 OPRPNQ99935 248 aaPredicted RBP7.16□□□□□ -1.26
HDAC9-225ENST00000490851 UPK3BQ9BT76 320 aa7.16□□□□□ -1.26
HDAC9-225ENST00000490851 TRGV4A0A0C4DH28 118 aa7.16□□□□□ -1.26
HDAC9-225ENST00000490851 K7EQD1 137 aa7.16□□□□□ -1.26
HDAC9-225ENST00000490851 HIST1H4AP62805 103 aaKnown RBP7.16□□□□□ -1.26
HDAC9-225ENST00000490851 PRR26Q8N8Z3 221 aa7.16□□□□□ -1.26
HDAC9-225ENST00000490851 OVOL2Q9BRP0 275 aa7.16□□□□□ -1.26
HDAC9-225ENST00000490851 LOC100131303A0A0U1RQF7 123 aa7.15□□□□□ -1.26
HDAC9-225ENST00000490851 ANK2Q01484 3957 aa7.15□□□□□ -1.26
HDAC9-225ENST00000490851 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.14□□□□□ -1.27
HDAC9-225ENST00000490851 IGHV4-28A0A0C4DH34 117 aa7.14□□□□□ -1.27
HDAC9-225ENST00000490851 TRBV7-6A0A0J9YX20 115 aa7.14□□□□□ -1.27
HDAC9-225ENST00000490851 IGKV2-29A2NJV5 120 aaPredicted RBP7.14□□□□□ -1.27
HDAC9-225ENST00000490851 RHOHQ15669 191 aa7.14□□□□□ -1.27
HDAC9-225ENST00000490851 FAM222AQ5U5X8 452 aa7.14□□□□□ -1.27
HDAC9-225ENST00000490851 CEMP1Q6PRD7 247 aaPredicted RBP7.14□□□□□ -1.27
HDAC9-225ENST00000490851 C20orf203Q8NBC4 194 aa7.14□□□□□ -1.27
HDAC9-225ENST00000490851 IGIPA6NJ69 53 aa7.13□□□□□ -1.27
HDAC9-225ENST00000490851 PAX4O43316 350 aa7.13□□□□□ -1.27
HDAC9-225ENST00000490851 PRB2P02812 416 aaPredicted RBP7.13□□□□□ -1.27
HDAC9-225ENST00000490851 PSMB2P49721 201 aa7.13□□□□□ -1.27
HDAC9-225ENST00000490851 RPL36AP83881 106 aaKnown RBP7.13□□□□□ -1.27
HDAC9-225ENST00000490851 RPL36ALQ969Q0 106 aaKnown RBP7.13□□□□□ -1.27
HDAC9-225ENST00000490851 TENM3Q9P273 2699 aa7.13□□□□□ -1.27
HDAC9-225ENST00000490851 TRBV7-3A0A075B6L6 115 aa7.13□□□□□ -1.27
HDAC9-225ENST00000490851 MYMXA0A1B0GTQ4 84 aa7.13□□□□□ -1.27
HDAC9-225ENST00000490851 RNASE13Q5GAN3 156 aaKnown RBP7.13□□□□□ -1.27
HDAC9-225ENST00000490851 ACYP1P07311 99 aa7.12□□□□□ -1.27
HDAC9-225ENST00000490851 MRPS36P82909 103 aaKnown RBP7.12□□□□□ -1.27
HDAC9-225ENST00000490851 RPL18AQ02543 176 aaKnown RBP7.12□□□□□ -1.27
HDAC9-225ENST00000490851 TRAV12-1A0A0B4J245 112 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms