RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 TRAV12-1A0A0B4J245 112 aa5.16□□□□□ -1.58
CLDN1-202ENST00000490800 NBDYA0A0U1RRE5 68 aa5.16□□□□□ -1.58
CLDN1-202ENST00000490800 C20orf202A1L168 122 aa5.16□□□□□ -1.58
CLDN1-202ENST00000490800 PCP4P48539 62 aa5.16□□□□□ -1.58
CLDN1-202ENST00000490800 CCL18P55774 89 aa5.16□□□□□ -1.58
CLDN1-202ENST00000490800 ZC2HC1BQ5TFG8 222 aa5.16□□□□□ -1.58
CLDN1-202ENST00000490800 TEX43Q6ZNM6 134 aa5.16□□□□□ -1.58
CLDN1-202ENST00000490800 SH2D6Q7Z4S9 175 aa5.16□□□□□ -1.58
CLDN1-202ENST00000490800 PMCHL2Q9BQD1 86 aa5.16□□□□□ -1.58
CLDN1-202ENST00000490800 TIMM21Q9BVV7 248 aa5.16□□□□□ -1.58
CLDN1-202ENST00000490800 LINC00588Q9Y4M8 146 aa5.16□□□□□ -1.58
CLDN1-202ENST00000490800 PCLOQ9Y6V0 5065 aa5.16□□□□□ -1.58
CLDN1-202ENST00000490800 A0A087WX48 190 aa5.15□□□□□ -1.59
CLDN1-202ENST00000490800 H7C423 109 aa5.15□□□□□ -1.59
CLDN1-202ENST00000490800 FGF6P10767 208 aa5.15□□□□□ -1.59
CLDN1-202ENST00000490800 GAGE6Q13070 117 aa5.15□□□□□ -1.59
CLDN1-202ENST00000490800 Q6ZUT4 128 aa5.15□□□□□ -1.59
CLDN1-202ENST00000490800 MRPL52Q86TS9 123 aaKnown RBP5.15□□□□□ -1.59
CLDN1-202ENST00000490800 ATOH7Q8N100 152 aa5.15□□□□□ -1.59
CLDN1-202ENST00000490800 CST9LQ9H4G1 147 aa5.15□□□□□ -1.59
CLDN1-202ENST00000490800 DNAH5Q8TE73 4624 aa5.14□□□□□ -1.59
CLDN1-202ENST00000490800 PRYO14603 147 aa5.14□□□□□ -1.59
CLDN1-202ENST00000490800 UBE2L6O14933 153 aa5.14□□□□□ -1.59
CLDN1-202ENST00000490800 MRPS36P82909 103 aaKnown RBP5.14□□□□□ -1.59
CLDN1-202ENST00000490800 PMVKQ15126 192 aa5.14□□□□□ -1.59
CLDN1-202ENST00000490800 C6orf223Q8N319 242 aa5.14□□□□□ -1.59
CLDN1-202ENST00000490800 AMELXQ99217 191 aa5.14□□□□□ -1.59
CLDN1-202ENST00000490800 CHCHD5Q9BSY4 110 aa5.14□□□□□ -1.59
CLDN1-202ENST00000490800 Q9H8V8 135 aa5.14□□□□□ -1.59
CLDN1-202ENST00000490800 MRPL35Q9NZE8 188 aaKnown RBP5.14□□□□□ -1.59
CLDN1-202ENST00000490800 CHTOPQ9Y3Y2 248 aaKnown RBP5.14□□□□□ -1.59
CLDN1-202ENST00000490800 CSDC2Q9Y534 153 aaKnown RBP5.14□□□□□ -1.59
CLDN1-202ENST00000490800 LRP1BQ9NZR2 4599 aa5.14□□□□□ -1.59
CLDN1-202ENST00000490800 ABCA13Q86UQ4 5058 aa5.14□□□□□ -1.59
CLDN1-202ENST00000490800 TRAV9-2A0A087WT02 112 aa5.13□□□□□ -1.59
CLDN1-202ENST00000490800 F8VRH5 84 aa5.13□□□□□ -1.59
CLDN1-202ENST00000490800 DPM2O94777 84 aa5.13□□□□□ -1.59
CLDN1-202ENST00000490800 SMAGPQ0VAQ4 97 aa5.13□□□□□ -1.59
CLDN1-202ENST00000490800 ESRGQ1W209 222 aa5.13□□□□□ -1.59
CLDN1-202ENST00000490800 MAJINQ3KP22 176 aa5.13□□□□□ -1.59
CLDN1-202ENST00000490800 RNASE13Q5GAN3 156 aaKnown RBP5.13□□□□□ -1.59
CLDN1-202ENST00000490800 PAPPA-AS1Q5QFB9 102 aa5.13□□□□□ -1.59
CLDN1-202ENST00000490800 LELP1Q5T871 98 aa5.13□□□□□ -1.59
CLDN1-202ENST00000490800 AMMECR1LQ6DCA0 310 aa5.13□□□□□ -1.59
CLDN1-202ENST00000490800 LYPD5Q6UWN5 251 aa5.13□□□□□ -1.59
CLDN1-202ENST00000490800 OR5A1Q8NGJ0 315 aa5.13□□□□□ -1.59
CLDN1-202ENST00000490800 KRTAP4-5Q9BYR2 181 aa5.13□□□□□ -1.59
CLDN1-202ENST00000490800 VCX2Q9H322 139 aa5.13□□□□□ -1.59
CLDN1-202ENST00000490800 CDC42SE2Q9NRR3 84 aa5.13□□□□□ -1.59
CLDN1-202ENST00000490800 IGLV4-69A0A075B6H9 119 aa5.12□□□□□ -1.59
CLDN1-202ENST00000490800 IGLV4-60A0A075B6I1 120 aa5.12□□□□□ -1.59
CLDN1-202ENST00000490800 hDV102S1A0JD36 115 aa5.12□□□□□ -1.59
CLDN1-202ENST00000490800 IGKCP01834 107 aa5.12□□□□□ -1.59
CLDN1-202ENST00000490800 ZNF25P17030 456 aaPredicted RBP5.12□□□□□ -1.59
CLDN1-202ENST00000490800 S100A12P80511 92 aa5.12□□□□□ -1.59
CLDN1-202ENST00000490800 ZNF664Q8N3J9 261 aa5.12□□□□□ -1.59
CLDN1-202ENST00000490800 TMEM101Q96IK0 257 aa5.12□□□□□ -1.59
CLDN1-202ENST00000490800 VAMP8Q9BV40 100 aa5.12□□□□□ -1.59
CLDN1-202ENST00000490800 A0A1B0GUV1 79 aa5.11□□□□□ -1.59
CLDN1-202ENST00000490800 C11orf86A6NJI1 115 aa5.11□□□□□ -1.59
CLDN1-202ENST00000490800 TMEM262E9PQX1 116 aa5.11□□□□□ -1.59
CLDN1-202ENST00000490800 IGLC3P0DOY3 106 aa5.11□□□□□ -1.59
CLDN1-202ENST00000490800 PLNP26678 52 aa5.11□□□□□ -1.59
CLDN1-202ENST00000490800 UBE2D1P51668 147 aa5.11□□□□□ -1.59
CLDN1-202ENST00000490800 RBX1P62877 108 aa5.11□□□□□ -1.59
CLDN1-202ENST00000490800 MPV17L2Q567V2 206 aa5.11□□□□□ -1.59
CLDN1-202ENST00000490800 PAM16Q9Y3D7 125 aa5.11□□□□□ -1.59
CLDN1-202ENST00000490800 TRAV8-6A0A0B4J262 113 aa5.1□□□□□ -1.59
CLDN1-202ENST00000490800 A0A0J9YXV3 536 aa5.1□□□□□ -1.59
CLDN1-202ENST00000490800 C16orf90A8MZG2 172 aa5.1□□□□□ -1.59
CLDN1-202ENST00000490800 SPATA45Q537H7 98 aa5.1□□□□□ -1.59
CLDN1-202ENST00000490800 NFE4Q86UQ8 179 aa5.1□□□□□ -1.59
CLDN1-202ENST00000490800 STPG4Q8N801 248 aa5.1□□□□□ -1.59
CLDN1-202ENST00000490800 C2orf88Q9BSF0 95 aa5.1□□□□□ -1.59
CLDN1-202ENST00000490800 KRTAP1-5Q9BYS1 174 aa5.1□□□□□ -1.59
CLDN1-202ENST00000490800 TINCRA0A1B0GVN0 87 aa5.09□□□□□ -1.59
CLDN1-202ENST00000490800 HSBP1L1C9JCN9 74 aa5.09□□□□□ -1.59
CLDN1-202ENST00000490800 SLPIP03973 132 aa5.09□□□□□ -1.59
CLDN1-202ENST00000490800 PKIAP61925 76 aa5.09□□□□□ -1.59
CLDN1-202ENST00000490800 FAM19A3Q7Z5A8 133 aa5.09□□□□□ -1.59
CLDN1-202ENST00000490800 UPK3BQ9BT76 320 aa5.09□□□□□ -1.59
CLDN1-202ENST00000490800 CHAC1Q9BUX1 264 aa5.09□□□□□ -1.59
CLDN1-202ENST00000490800 PRO1933Q9H354 126 aa5.09□□□□□ -1.59
CLDN1-202ENST00000490800 MRPS16Q9Y3D3 137 aaKnown RBP5.09□□□□□ -1.59
CLDN1-202ENST00000490800 HSPG2P98160 4391 aa5.09□□□□□ -1.59
CLDN1-202ENST00000490800 APOBP04114 4563 aaKnown RBP5.09□□□□□ -1.6
CLDN1-202ENST00000490800 TRAV13-1A0A0B4J241 112 aa5.08□□□□□ -1.6
CLDN1-202ENST00000490800 ZNF22P17026 224 aaPredicted RBP5.08□□□□□ -1.6
CLDN1-202ENST00000490800 TTC32Q5I0X7 151 aa5.08□□□□□ -1.6
CLDN1-202ENST00000490800 LINC00242Q5T6M2 205 aa5.08□□□□□ -1.6
CLDN1-202ENST00000490800 WFDC10BQ8IUB3 73 aa5.08□□□□□ -1.6
CLDN1-202ENST00000490800 IGLV5-45A0A087WSX0 123 aa5.07□□□□□ -1.6
CLDN1-202ENST00000490800 IGKV2D-26A0A0A0MRZ7 120 aa5.07□□□□□ -1.6
CLDN1-202ENST00000490800 IGKV3OR2-268A0A0C4DH90 116 aa5.07□□□□□ -1.6
CLDN1-202ENST00000490800 SIVA1O15304 175 aa5.07□□□□□ -1.6
CLDN1-202ENST00000490800 CDK2AP2O75956 126 aa5.07□□□□□ -1.6
CLDN1-202ENST00000490800 COX6A2Q02221 97 aa5.07□□□□□ -1.6
CLDN1-202ENST00000490800 TMEM170BQ5T4T1 132 aa5.07□□□□□ -1.6
CLDN1-202ENST00000490800 TM2D2Q9BX73 214 aa5.07□□□□□ -1.6
CLDN1-202ENST00000490800 LINC00959A0A1B0GUT2 108 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms