RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 A4D1N5 150 aa10.41□□□□□ -0.74
ARHGEF39-205ENST00000490638 MUSTN1Q8IVN3 82 aa10.41□□□□□ -0.74
ARHGEF39-205ENST00000490638 TRAV8-4A0A0B4J246 113 aa10.41□□□□□ -0.74
ARHGEF39-205ENST00000490638 NUPR2A6NF83 97 aa10.41□□□□□ -0.74
ARHGEF39-205ENST00000490638 FLNCQ14315 2725 aa10.41□□□□□ -0.74
ARHGEF39-205ENST00000490638 K7ERJ3 54 aa10.41□□□□□ -0.74
ARHGEF39-205ENST00000490638 CFC1BP0CG36 223 aa10.41□□□□□ -0.74
ARHGEF39-205ENST00000490638 CFC1P0CG37 223 aa10.41□□□□□ -0.74
ARHGEF39-205ENST00000490638 UBE2AP49459 152 aa10.41□□□□□ -0.74
ARHGEF39-205ENST00000490638 MTURNQ8N3F0 131 aa10.4□□□□□ -0.74
ARHGEF39-205ENST00000490638 CRYBA4P53673 196 aa10.4□□□□□ -0.74
ARHGEF39-205ENST00000490638 NFE4Q86UQ8 179 aa10.4□□□□□ -0.75
ARHGEF39-205ENST00000490638 TINCRA0A1B0GVN0 87 aa10.39□□□□□ -0.75
ARHGEF39-205ENST00000490638 FHL3Q13643 280 aa10.39□□□□□ -0.75
ARHGEF39-205ENST00000490638 POLR2KP53803 58 aaKnown RBP10.39□□□□□ -0.75
ARHGEF39-205ENST00000490638 C12orf74Q32Q52 190 aa10.39□□□□□ -0.75
ARHGEF39-205ENST00000490638 BEAN1Q3B7T3 259 aa10.39□□□□□ -0.75
ARHGEF39-205ENST00000490638 UFSP1Q6NVU6 142 aa10.39□□□□□ -0.75
ARHGEF39-205ENST00000490638 COL27A1Q8IZC6 1860 aaPredicted RBP10.38□□□□□ -0.75
ARHGEF39-205ENST00000490638 K7EP13 123 aa10.38□□□□□ -0.75
ARHGEF39-205ENST00000490638 ADGRG4Q8IZF6 3080 aa10.38□□□□□ -0.75
ARHGEF39-205ENST00000490638 A0A096LNT2 108 aa10.38□□□□□ -0.75
ARHGEF39-205ENST00000490638 NRACQ8N912 160 aa10.38□□□□□ -0.75
ARHGEF39-205ENST00000490638 CITED1Q99966 193 aa10.38□□□□□ -0.75
ARHGEF39-205ENST00000490638 UBE2D3P61077 147 aa10.37□□□□□ -0.75
ARHGEF39-205ENST00000490638 UBE2D2P62837 147 aa10.37□□□□□ -0.75
ARHGEF39-205ENST00000490638 SYCNQ0VAF6 134 aa10.37□□□□□ -0.75
ARHGEF39-205ENST00000490638 GAGE2AQ6NT46 116 aa10.37□□□□□ -0.75
ARHGEF39-205ENST00000490638 CNFNQ9BYD5 112 aa10.37□□□□□ -0.75
ARHGEF39-205ENST00000490638 GAS8-AS1O95177 125 aa10.37□□□□□ -0.75
ARHGEF39-205ENST00000490638 TSHBP01222 138 aa10.37□□□□□ -0.75
ARHGEF39-205ENST00000490638 NCR3O14931 201 aa10.37□□□□□ -0.75
ARHGEF39-205ENST00000490638 NOTCH1P46531 2555 aa10.36□□□□□ -0.75
ARHGEF39-205ENST00000490638 NHLRC4P0CG21 123 aaPredicted RBP10.36□□□□□ -0.75
ARHGEF39-205ENST00000490638 LINC00526Q96FQ7 95 aa10.36□□□□□ -0.75
ARHGEF39-205ENST00000490638 INAFM2P0DMQ5 153 aa10.35□□□□□ -0.75
ARHGEF39-205ENST00000490638 XAGE1AQ9HD64 81 aa10.35□□□□□ -0.75
ARHGEF39-205ENST00000490638 C9orf118A6NHY6 69 aa10.35□□□□□ -0.75
ARHGEF39-205ENST00000490638 SPATA12Q7Z6I5 190 aa10.35□□□□□ -0.75
ARHGEF39-205ENST00000490638 ZNF22P17026 224 aaPredicted RBP10.35□□□□□ -0.75
ARHGEF39-205ENST00000490638 CD164L2Q6UWJ8 174 aa10.35□□□□□ -0.75
ARHGEF39-205ENST00000490638 CARD19Q96LW7 228 aa10.34□□□□□ -0.75
ARHGEF39-205ENST00000490638 PYGO1Q9Y3Y4 419 aa10.34□□□□□ -0.75
ARHGEF39-205ENST00000490638 RPL32P62910 135 aaKnown RBP10.34□□□□□ -0.75
ARHGEF39-205ENST00000490638 HIST1H4AP62805 103 aaKnown RBP10.33□□□□□ -0.76
ARHGEF39-205ENST00000490638 DSCR8Q96T75 97 aa10.33□□□□□ -0.76
ARHGEF39-205ENST00000490638 FHL2Q14192 279 aa10.33□□□□□ -0.76
ARHGEF39-205ENST00000490638 LINC00959A0A1B0GUT2 108 aa10.32□□□□□ -0.76
ARHGEF39-205ENST00000490638 H0YGX0 51 aa10.32□□□□□ -0.76
ARHGEF39-205ENST00000490638 A0A087WZ39 114 aa10.32□□□□□ -0.76
ARHGEF39-205ENST00000490638 ETDBQ3ZM63 59 aa10.32□□□□□ -0.76
ARHGEF39-205ENST00000490638 HIGD2AQ9BW72 106 aa10.32□□□□□ -0.76
ARHGEF39-205ENST00000490638 K7EP34 96 aa10.31□□□□□ -0.76
ARHGEF39-205ENST00000490638 H3BMG7 143 aa10.31□□□□□ -0.76
ARHGEF39-205ENST00000490638 DIRC1Q969H9 104 aa10.31□□□□□ -0.76
ARHGEF39-205ENST00000490638 UBR5O95071 2799 aaPredicted RBP10.3□□□□□ -0.76
ARHGEF39-205ENST00000490638 TAX1BP3O14907 124 aa10.3□□□□□ -0.76
ARHGEF39-205ENST00000490638 COX8CQ7Z4L0 72 aa10.3□□□□□ -0.76
ARHGEF39-205ENST00000490638 UBE2D4Q9Y2X8 147 aa10.29□□□□□ -0.76
ARHGEF39-205ENST00000490638 FXYD2P54710 66 aa10.29□□□□□ -0.76
ARHGEF39-205ENST00000490638 HAMPP81172 84 aa10.29□□□□□ -0.76
ARHGEF39-205ENST00000490638 ORMDL1Q9P0S3 153 aa10.29□□□□□ -0.76
ARHGEF39-205ENST00000490638 LRCOL1A6NCL2 159 aa10.29□□□□□ -0.76
ARHGEF39-205ENST00000490638 NBEAL1Q6ZS30 2694 aa10.29□□□□□ -0.76
ARHGEF39-205ENST00000490638 A0A0J9YXY3 114 aa10.29□□□□□ -0.76
ARHGEF39-205ENST00000490638 C4orf48Q5BLP8 95 aa10.29□□□□□ -0.76
ARHGEF39-205ENST00000490638 WFDC9Q8NEX5 89 aa10.28□□□□□ -0.76
ARHGEF39-205ENST00000490638 A0A1W2PPM0 123 aa10.28□□□□□ -0.76
ARHGEF39-205ENST00000490638 HIGD1BQ9P298 99 aa10.28□□□□□ -0.76
ARHGEF39-205ENST00000490638 BAALC-AS2P0C853 105 aa10.28□□□□□ -0.76
ARHGEF39-205ENST00000490638 CDC42SE2Q9NRR3 84 aa10.28□□□□□ -0.76
ARHGEF39-205ENST00000490638 CHCHD7Q9BUK0 85 aa10.27□□□□□ -0.76
ARHGEF39-205ENST00000490638 KRTAP1-3Q8IUG1 177 aa10.27□□□□□ -0.77
ARHGEF39-205ENST00000490638 SPANXCQ9NY87 97 aa10.27□□□□□ -0.77
ARHGEF39-205ENST00000490638 COL12A1Q99715 3063 aa10.27□□□□□ -0.77
ARHGEF39-205ENST00000490638 UBL5Q9BZL1 73 aa10.27□□□□□ -0.77
ARHGEF39-205ENST00000490638 IBA57-AS1B1ANH7 110 aa10.27□□□□□ -0.77
ARHGEF39-205ENST00000490638 KALRNO60229 2985 aa10.26□□□□□ -0.77
ARHGEF39-205ENST00000490638 A8MZ25 164 aa10.26□□□□□ -0.77
ARHGEF39-205ENST00000490638 MRPS36P82909 103 aaKnown RBP10.26□□□□□ -0.77
ARHGEF39-205ENST00000490638 FAM19A5Q7Z5A7 132 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF39-205ENST00000490638 ANAPC13Q9BS18 74 aa10.26□□□□□ -0.77
ARHGEF39-205ENST00000490638 SBSPONQ8IVN8 264 aa10.26□□□□□ -0.77
ARHGEF39-205ENST00000490638 TMEM223A0PJW6 202 aa10.25□□□□□ -0.77
ARHGEF39-205ENST00000490638 IGLV4-69A0A075B6H9 119 aa10.24□□□□□ -0.77
ARHGEF39-205ENST00000490638 ZZEF1O43149 2961 aa10.24□□□□□ -0.77
ARHGEF39-205ENST00000490638 TACC2O95359 2948 aa10.24□□□□□ -0.77
ARHGEF39-205ENST00000490638 CELA1Q9UNI1 258 aa10.23□□□□□ -0.77
ARHGEF39-205ENST00000490638 FUSP35637 526 aaKnown RBP eCLIP10.23□□□□□ -0.77
ARHGEF39-205ENST00000490638 RBMY1FQ15415 496 aaKnown RBP10.23□□□□□ -0.77
ARHGEF39-205ENST00000490638 Q6ZSN1 163 aa10.23□□□□□ -0.77
ARHGEF39-205ENST00000490638 C7orf33Q8WU49 177 aa10.23□□□□□ -0.77
ARHGEF39-205ENST00000490638 TP73-AS1Q9UF72 201 aa10.23□□□□□ -0.77
ARHGEF39-205ENST00000490638 NTN5Q8WTR8 489 aaPredicted RBP10.23□□□□□ -0.77
ARHGEF39-205ENST00000490638 IGLV4-60A0A075B6I1 120 aa10.23□□□□□ -0.77
ARHGEF39-205ENST00000490638 B9D2Q9BPU9 175 aa10.23□□□□□ -0.77
ARHGEF39-205ENST00000490638 COX7BP24311 80 aa10.22□□□□□ -0.77
ARHGEF39-205ENST00000490638 WFDC10BQ8IUB3 73 aa10.22□□□□□ -0.77
ARHGEF39-205ENST00000490638 LYPD5Q6UWN5 251 aa10.21□□□□□ -0.77
ARHGEF39-205ENST00000490638 FAM19A1Q7Z5A9 133 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms