RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 DUX3Q96PT4 197 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 ZNF256Q9Y2P7 627 aaPredicted RBP2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 PYGO1Q9Y3Y4 419 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 AGRNO00468 2067 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 CELSR2Q9HCU4 2923 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 IGLV4-3A0A075B6K6 122 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 IGLV5-45A0A087WSX0 123 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 A0A1B0GUV1 79 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 FAM223BA6NKX1 122 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 J3KT08 172 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 M0QY20 66 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 CCL24O00175 119 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 IGHV4-59P01825 116 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 MGPP08493 103 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 COX6CP09669 75 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 CRYGAP11844 174 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 MRPS36P82909 103 aaKnown RBP2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 ECSCRQ19T08 205 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 DEFB112Q30KQ8 113 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 FAM223AQ8IWN6 122 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 C20orf203Q8NBC4 194 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 FAM104AQ969W3 186 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 EEF1AKMT3Q96AZ1 226 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 C2orf48Q96LS8 159 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 ESM1Q9NQ30 184 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 PHLDA3Q9Y5J5 127 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 SVEP1Q4LDE5 3571 aa2.49□□□□□ -2.01
CRNKL1-203ENST00000490258 USP9YO00507 2555 aaPredicted RBP2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 IGHV3-49A0A0A0MS15 119 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 IGHV3-35A0A0C4DH35 117 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 IGHV1-58A0A0C4DH39 117 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 FAM236AA0A1B0GUQ0 79 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 FAM236BA0A1B0GV22 79 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 TINCRA0A1B0GVN0 87 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 H3BUX3 64 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 NDUFA4O00483 81 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 COX7A2LO14548 114 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 NPFFO15130 113 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 LY6G6DO95868 133 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 TRACP01848 142 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 IGF1P05019 195 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 MSMBP08118 114 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 IGHV3-30-3P0DP02 117 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 UBE2E1P51965 193 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 RPL39P62891 51 aaKnown RBP2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 ZNF56Q15929 161 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 Q1RN00 199 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 C5orf47Q569G3 176 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 C9orf153Q5TBE3 101 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 SMCR5Q8TEV8 140 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 VSIG2Q96IQ7 327 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 SPG11Q96JI7 2443 aa2.48□□□□□ -2.01
CRNKL1-203ENST00000490258 APCP25054 2843 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 IGHV3-16A0A0C4DH30 117 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 A0A0J9YXV3 536 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 SMIM9A6NGZ8 99 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 G3V318 75 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 H3BUA1 57 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 I3L3M4 83 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 ATOX1O00244 68 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 NDUFA1O15239 70 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 ATP6V0E1O15342 81 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 TRBV12-3P01733 135 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 IGHV3-11P01762 117 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 COX7CP15954 63 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 S100A4P26447 101 aaKnown RBP2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 EMP1P54849 157 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 DSCR9P59020 149 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 TMEM258P61165 79 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 HERVK_113P63121 156 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 DEFB136Q30KP8 78 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 KRTAP24-1Q3LI83 254 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 ADAMTSL4-AS1Q5T5F5 129 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 CHCHD5Q9BSY4 110 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 TIMM21Q9BVV7 248 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 C22orf24Q9Y442 160 aa2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 FLNAP21333 2647 aaKnown RBP2.47□□□□□ -2.01
CRNKL1-203ENST00000490258 ZANQ9Y493 2812 aa2.46□□□□□ -2.01
CRNKL1-203ENST00000490258 IGHV3OR16-13A0A075B7E8 117 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 IGHV3-74A0A0B4J1X5 117 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 IGHV3-66A0A0C4DH42 116 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 H7C2G1 150 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 GNRH2O43555 120 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 INAFM2P0DMQ5 153 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 LINC00694P0DN24 101 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 ID1P41134 155 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 DEFB1P60022 68 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 KRTAP10-3P60369 221 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 Q6JHZ5 121 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 CEMP1Q6PRD7 247 aaPredicted RBP2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 CLEC19AQ6UXS0 136 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 FAM19A3Q7Z5A8 133 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 C5orf56Q8N8D9 126 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 CLEC2BQ92478 149 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 OBSCN-AS1Q96MR7 158 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 OPRPNQ99935 248 aaPredicted RBP2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 UPK3BQ9BT76 320 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 NDUFA12Q9UI09 145 aa2.46□□□□□ -2.02
CRNKL1-203ENST00000490258 LRRK2Q5S007 2527 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms