RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 SNHG12Q9BXW3 62 aa7.11□□□□□ -1.27
SCAMP4-208ENST00000489554 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.1□□□□□ -1.27
SCAMP4-208ENST00000489554 IGKV2-29A2NJV5 120 aaPredicted RBP7.1□□□□□ -1.27
SCAMP4-208ENST00000489554 H7C423 109 aa7.1□□□□□ -1.27
SCAMP4-208ENST00000489554 KRTAP10-2P60368 255 aa7.1□□□□□ -1.27
SCAMP4-208ENST00000489554 STPG4Q8N801 248 aa7.1□□□□□ -1.27
SCAMP4-208ENST00000489554 TIMM21Q9BVV7 248 aa7.1□□□□□ -1.27
SCAMP4-208ENST00000489554 CST9LQ9H4G1 147 aa7.1□□□□□ -1.27
SCAMP4-208ENST00000489554 PGPEP1Q9NXJ5 209 aa7.1□□□□□ -1.27
SCAMP4-208ENST00000489554 LRP1BQ9NZR2 4599 aa7.09□□□□□ -1.27
SCAMP4-208ENST00000489554 TRBV25-1A0A075B6N4 114 aa7.09□□□□□ -1.27
SCAMP4-208ENST00000489554 NMUP48645 174 aa7.09□□□□□ -1.27
SCAMP4-208ENST00000489554 ANKRD39Q53RE8 183 aa7.09□□□□□ -1.27
SCAMP4-208ENST00000489554 TMEM243Q9BU79 118 aa7.09□□□□□ -1.27
SCAMP4-208ENST00000489554 HIGD1BQ9P298 99 aa7.09□□□□□ -1.27
SCAMP4-208ENST00000489554 A0A087WTM6 91 aa7.08□□□□□ -1.28
SCAMP4-208ENST00000489554 IBA57-AS1B1ANH7 110 aa7.08□□□□□ -1.28
SCAMP4-208ENST00000489554 SEC11AP67812 179 aa7.08□□□□□ -1.28
SCAMP4-208ENST00000489554 GAGE6Q13070 117 aa7.08□□□□□ -1.28
SCAMP4-208ENST00000489554 DGAT2L7PQ6IED9 249 aa7.08□□□□□ -1.28
SCAMP4-208ENST00000489554 UBE2D4Q9Y2X8 147 aa7.08□□□□□ -1.28
SCAMP4-208ENST00000489554 RYR1P21817 5038 aa7.08□□□□□ -1.28
SCAMP4-208ENST00000489554 C11orf86A6NJI1 115 aa7.07□□□□□ -1.28
SCAMP4-208ENST00000489554 E9PLD3 99 aa7.07□□□□□ -1.28
SCAMP4-208ENST00000489554 MRPS36P82909 103 aaKnown RBP7.07□□□□□ -1.28
SCAMP4-208ENST00000489554 HSD52Q0P140 79 aa7.07□□□□□ -1.28
SCAMP4-208ENST00000489554 TAL2Q16559 108 aa7.07□□□□□ -1.28
SCAMP4-208ENST00000489554 MPV17L2Q567V2 206 aa7.07□□□□□ -1.28
SCAMP4-208ENST00000489554 KRTAP17-1Q9BYP8 105 aa7.07□□□□□ -1.28
SCAMP4-208ENST00000489554 CSDC2Q9Y534 153 aaKnown RBP7.07□□□□□ -1.28
SCAMP4-208ENST00000489554 IGLV4-60A0A075B6I1 120 aa7.06□□□□□ -1.28
SCAMP4-208ENST00000489554 A6NDN8 102 aa7.06□□□□□ -1.28
SCAMP4-208ENST00000489554 PSCAO43653 123 aa7.06□□□□□ -1.28
SCAMP4-208ENST00000489554 IGHV3-30P01768 117 aa7.06□□□□□ -1.28
SCAMP4-208ENST00000489554 IGHV3-33P01772 117 aa7.06□□□□□ -1.28
SCAMP4-208ENST00000489554 IGHV3-30-3P0DP02 117 aa7.06□□□□□ -1.28
SCAMP4-208ENST00000489554 IGHV3-30-5P0DP03 117 aa7.06□□□□□ -1.28
SCAMP4-208ENST00000489554 FGF6P10767 208 aa7.06□□□□□ -1.28
SCAMP4-208ENST00000489554 RBX1P62877 108 aa7.06□□□□□ -1.28
SCAMP4-208ENST00000489554 BATFQ16520 125 aa7.06□□□□□ -1.28
SCAMP4-208ENST00000489554 OPRPNQ99935 248 aaPredicted RBP7.06□□□□□ -1.28
SCAMP4-208ENST00000489554 CHCHD5Q9BSY4 110 aa7.06□□□□□ -1.28
SCAMP4-208ENST00000489554 HSPG2P98160 4391 aa7.06□□□□□ -1.28
SCAMP4-208ENST00000489554 IGLV4-3A0A075B6K6 122 aa7.05□□□□□ -1.28
SCAMP4-208ENST00000489554 A0A1B0GUV1 79 aa7.05□□□□□ -1.28
SCAMP4-208ENST00000489554 UBE2L6O14933 153 aa7.05□□□□□ -1.28
SCAMP4-208ENST00000489554 HINT1P49773 126 aaPredicted RBP7.05□□□□□ -1.28
SCAMP4-208ENST00000489554 TMEM101Q96IK0 257 aa7.05□□□□□ -1.28
SCAMP4-208ENST00000489554 AMELXQ99217 191 aa7.05□□□□□ -1.28
SCAMP4-208ENST00000489554 MYMXA0A1B0GTQ4 84 aa7.04□□□□□ -1.28
SCAMP4-208ENST00000489554 ZNF25P17030 456 aaPredicted RBP7.04□□□□□ -1.28
SCAMP4-208ENST00000489554 TMEM170BQ5T4T1 132 aa7.04□□□□□ -1.28
SCAMP4-208ENST00000489554 Q6ZUT4 128 aa7.04□□□□□ -1.28
SCAMP4-208ENST00000489554 MAPKAPK5-AS1Q8N8E1 139 aa7.04□□□□□ -1.28
SCAMP4-208ENST00000489554 PLEKHB2Q96CS7 222 aa7.04□□□□□ -1.28
SCAMP4-208ENST00000489554 TM2D2Q9BX73 214 aa7.04□□□□□ -1.28
SCAMP4-208ENST00000489554 Q9HAA7 133 aa7.04□□□□□ -1.28
SCAMP4-208ENST00000489554 CDC42SE2Q9NRR3 84 aa7.04□□□□□ -1.28
SCAMP4-208ENST00000489554 DNAH5Q8TE73 4624 aa7.04□□□□□ -1.28
SCAMP4-208ENST00000489554 IGLV4-69A0A075B6H9 119 aa7.03□□□□□ -1.28
SCAMP4-208ENST00000489554 TRAV8-3A0A0A6YYJ7 113 aa7.03□□□□□ -1.28
SCAMP4-208ENST00000489554 TINCRA0A1B0GVN0 87 aa7.03□□□□□ -1.28
SCAMP4-208ENST00000489554 H3BRM9 83 aa7.03□□□□□ -1.28
SCAMP4-208ENST00000489554 BVES-AS1Q5T3Y7 98 aa7.03□□□□□ -1.28
SCAMP4-208ENST00000489554 AMMECR1LQ6DCA0 310 aa7.03□□□□□ -1.28
SCAMP4-208ENST00000489554 ORAOV1Q8WV07 137 aa7.03□□□□□ -1.28
SCAMP4-208ENST00000489554 PCLOQ9Y6V0 5065 aa7.03□□□□□ -1.28
SCAMP4-208ENST00000489554 APOBP04114 4563 aaKnown RBP7.02□□□□□ -1.29
SCAMP4-208ENST00000489554 LRCOL1A6NCL2 159 aa7.02□□□□□ -1.29
SCAMP4-208ENST00000489554 LGALS3P17931 250 aaKnown RBP7.02□□□□□ -1.29
SCAMP4-208ENST00000489554 RNASE13Q5GAN3 156 aaKnown RBP7.02□□□□□ -1.29
SCAMP4-208ENST00000489554 C2orf91Q6ZV80 131 aa7.02□□□□□ -1.29
SCAMP4-208ENST00000489554 PCP2Q8IVA1 136 aa7.02□□□□□ -1.29
SCAMP4-208ENST00000489554 Q8N1X5 172 aa7.02□□□□□ -1.29
SCAMP4-208ENST00000489554 OR5A1Q8NGJ0 315 aa7.02□□□□□ -1.29
SCAMP4-208ENST00000489554 NTN5Q8WTR8 489 aaPredicted RBP7.02□□□□□ -1.29
SCAMP4-208ENST00000489554 CHAC1Q9BUX1 264 aa7.02□□□□□ -1.29
SCAMP4-208ENST00000489554 GEMIN7Q9H840 131 aaKnown RBP7.02□□□□□ -1.29
SCAMP4-208ENST00000489554 PRR34Q9NV39 138 aa7.02□□□□□ -1.29
SCAMP4-208ENST00000489554 TMEM262E9PQX1 116 aa7.01□□□□□ -1.29
SCAMP4-208ENST00000489554 LEPROTO15243 131 aa7.01□□□□□ -1.29
SCAMP4-208ENST00000489554 FUSP35637 526 aaKnown RBP eCLIP7.01□□□□□ -1.29
SCAMP4-208ENST00000489554 HERVK_113P63121 156 aa7.01□□□□□ -1.29
SCAMP4-208ENST00000489554 ENHOQ6UWT2 76 aa7.01□□□□□ -1.29
SCAMP4-208ENST00000489554 COX11Q9Y6N1 276 aa7.01□□□□□ -1.29
SCAMP4-208ENST00000489554 IGKV2D-26A0A0A0MRZ7 120 aa7□□□□□ -1.29
SCAMP4-208ENST00000489554 A0A1B0GV90 55 aa7□□□□□ -1.29
SCAMP4-208ENST00000489554 TMEM238LA0A1B0GVL6 79 aa7□□□□□ -1.29
SCAMP4-208ENST00000489554 TMEM223A0PJW6 202 aa7□□□□□ -1.29
SCAMP4-208ENST00000489554 A6NJY4 79 aa7□□□□□ -1.29
SCAMP4-208ENST00000489554 ZNF815PA8K554 130 aa7□□□□□ -1.29
SCAMP4-208ENST00000489554 GCSHP23434 173 aa7□□□□□ -1.29
SCAMP4-208ENST00000489554 SCGB1D4Q6XE38 83 aa7□□□□□ -1.29
SCAMP4-208ENST00000489554 FAM19A3Q7Z5A8 133 aa7□□□□□ -1.29
SCAMP4-208ENST00000489554 Q8N814 137 aa7□□□□□ -1.29
SCAMP4-208ENST00000489554 RMI2Q96E14 147 aa7□□□□□ -1.29
SCAMP4-208ENST00000489554 KRTAP4-5Q9BYR2 181 aa7□□□□□ -1.29
SCAMP4-208ENST00000489554 IGLV5-52A0A0A0MRZ9 124 aa6.99□□□□□ -1.29
SCAMP4-208ENST00000489554 J3QQQ9 107 aa6.99□□□□□ -1.29
SCAMP4-208ENST00000489554 PTTG1IPP53801 180 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms