RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 PLXNB3Q9ULL4 1909 aa11.22□□□□□ -0.61
PKD1-220ENST00000487932 RNF185Q96GF1 192 aa11.22□□□□□ -0.61
PKD1-220ENST00000487932 PCOTHQ58A44 107 aa11.21□□□□□ -0.62
PKD1-220ENST00000487932 DSCAMO60469 2012 aa11.21□□□□□ -0.62
PKD1-220ENST00000487932 TRBV7-6A0A0J9YX20 115 aa11.2□□□□□ -0.62
PKD1-220ENST00000487932 TIMM17BO60830 172 aa11.2□□□□□ -0.62
PKD1-220ENST00000487932 C1orf134Q5TEV5 83 aa11.2□□□□□ -0.62
PKD1-220ENST00000487932 TRBV30A0A0K0K1B3 111 aa11.2□□□□□ -0.62
PKD1-220ENST00000487932 Q6Q795 121 aa11.2□□□□□ -0.62
PKD1-220ENST00000487932 EDN2P20800 178 aa11.2□□□□□ -0.62
PKD1-220ENST00000487932 PRR9Q5T870 116 aa11.2□□□□□ -0.62
PKD1-220ENST00000487932 UNQ6190/PRO20217Q6UXQ8 127 aa11.2□□□□□ -0.62
PKD1-220ENST00000487932 DEFB116Q30KQ4 102 aa11.2□□□□□ -0.62
PKD1-220ENST00000487932 U3KQK5 164 aa11.19□□□□□ -0.62
PKD1-220ENST00000487932 NDUFA7O95182 113 aa11.19□□□□□ -0.62
PKD1-220ENST00000487932 KIAA1549Q9HCM3 1950 aa11.19□□□□□ -0.62
PKD1-220ENST00000487932 RNASE3P12724 160 aaKnown RBP11.18□□□□□ -0.62
PKD1-220ENST00000487932 BRWD1-AS2P59051 145 aa11.18□□□□□ -0.62
PKD1-220ENST00000487932 LINC00208Q96KT6 92 aa11.18□□□□□ -0.62
PKD1-220ENST00000487932 PLA2G1BP04054 148 aaKnown RBP11.17□□□□□ -0.62
PKD1-220ENST00000487932 Q6ZTC4 211 aa11.17□□□□□ -0.62
PKD1-220ENST00000487932 LINC00337Q8N6G1 96 aa11.17□□□□□ -0.62
PKD1-220ENST00000487932 PRR3P79522 188 aaKnown RBP11.17□□□□□ -0.62
PKD1-220ENST00000487932 CSPG4Q6UVK1 2322 aa11.17□□□□□ -0.62
PKD1-220ENST00000487932 COX17Q14061 63 aa11.16□□□□□ -0.62
PKD1-220ENST00000487932 KRTAP10-9P60411 292 aa11.15□□□□□ -0.62
PKD1-220ENST00000487932 SBSPONQ8IVN8 264 aa11.15□□□□□ -0.62
PKD1-220ENST00000487932 SPG11Q96JI7 2443 aa11.15□□□□□ -0.63
PKD1-220ENST00000487932 EBI3Q14213 229 aa11.14□□□□□ -0.63
PKD1-220ENST00000487932 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.14□□□□□ -0.63
PKD1-220ENST00000487932 Q9BRP9 147 aa11.14□□□□□ -0.63
PKD1-220ENST00000487932 CRIP2P52943 208 aaPredicted RBP11.14□□□□□ -0.63
PKD1-220ENST00000487932 LINC00574Q9H8X3 128 aa11.14□□□□□ -0.63
PKD1-220ENST00000487932 PYGO1Q9Y3Y4 419 aa11.14□□□□□ -0.63
PKD1-220ENST00000487932 COL4A3Q01955 1670 aa11.14□□□□□ -0.63
PKD1-220ENST00000487932 NDUFC1O43677 76 aa11.14□□□□□ -0.63
PKD1-220ENST00000487932 LINC01547P58512 204 aaPredicted RBP11.14□□□□□ -0.63
PKD1-220ENST00000487932 PRR14LQ5THK1 2151 aa11.13□□□□□ -0.63
PKD1-220ENST00000487932 ACACBO00763 2458 aa11.13□□□□□ -0.63
PKD1-220ENST00000487932 C2orf16Q68DN1 1984 aa11.13□□□□□ -0.63
PKD1-220ENST00000487932 P0C879 139 aa11.13□□□□□ -0.63
PKD1-220ENST00000487932 TRBV10-3A0A0K0K1G6 114 aa11.13□□□□□ -0.63
PKD1-220ENST00000487932 ATP5EP56381 51 aaPredicted RBP11.13□□□□□ -0.63
PKD1-220ENST00000487932 Q8IZM0 81 aa11.13□□□□□ -0.63
PKD1-220ENST00000487932 COX6A2Q02221 97 aa11.12□□□□□ -0.63
PKD1-220ENST00000487932 C11orf1Q9H5F2 150 aa11.12□□□□□ -0.63
PKD1-220ENST00000487932 CUL9Q8IWT3 2517 aa11.12□□□□□ -0.63
PKD1-220ENST00000487932 CDC42SE2Q9NRR3 84 aa11.12□□□□□ -0.63
PKD1-220ENST00000487932 C2orf48Q96LS8 159 aa11.11□□□□□ -0.63
PKD1-220ENST00000487932 SOSTDC1Q6X4U4 206 aa11.11□□□□□ -0.63
PKD1-220ENST00000487932 C11orf21Q9P2W6 132 aa11.11□□□□□ -0.63
PKD1-220ENST00000487932 AVPP01185 164 aa11.11□□□□□ -0.63
PKD1-220ENST00000487932 BEAN1Q3B7T3 259 aa11.11□□□□□ -0.63
PKD1-220ENST00000487932 TECTAO75443 2155 aa11.11□□□□□ -0.63
PKD1-220ENST00000487932 NRACQ8N912 160 aa11.1□□□□□ -0.63
PKD1-220ENST00000487932 CDSNQ15517 529 aa11.1□□□□□ -0.63
PKD1-220ENST00000487932 GAS8-AS1O95177 125 aa11.09□□□□□ -0.63
PKD1-220ENST00000487932 Q6ZPA2 131 aa11.09□□□□□ -0.63
PKD1-220ENST00000487932 FREM1Q5H8C1 2179 aa11.08□□□□□ -0.64
PKD1-220ENST00000487932 IGLV1-40P01703 118 aa11.08□□□□□ -0.64
PKD1-220ENST00000487932 XGP55808 180 aa11.08□□□□□ -0.64
PKD1-220ENST00000487932 MRPS36P82909 103 aaKnown RBP11.08□□□□□ -0.64
PKD1-220ENST00000487932 HIVEP3Q5T1R4 2406 aa11.07□□□□□ -0.64
PKD1-220ENST00000487932 NTM-AS1Q6ZSK4 140 aa11.07□□□□□ -0.64
PKD1-220ENST00000487932 IGLV4-60A0A075B6I1 120 aa11.06□□□□□ -0.64
PKD1-220ENST00000487932 KLLNB2CW77 178 aa11.06□□□□□ -0.64
PKD1-220ENST00000487932 IGKV2D-30A0A075B6S6 120 aa11.06□□□□□ -0.64
PKD1-220ENST00000487932 IGKV2-30P06310 120 aa11.06□□□□□ -0.64
PKD1-220ENST00000487932 EGFEM1PQ0D2K5 195 aa11.06□□□□□ -0.64
PKD1-220ENST00000487932 PRRC2AP48634 2157 aaKnown RBP11.05□□□□□ -0.64
PKD1-220ENST00000487932 A0A087WSZ3 146 aa11.04□□□□□ -0.64
PKD1-220ENST00000487932 CCDC179H3BU77 68 aa11.04□□□□□ -0.64
PKD1-220ENST00000487932 DOPEY1Q5JWR5 2465 aa11.04□□□□□ -0.64
PKD1-220ENST00000487932 PRLHP81277 87 aa11.04□□□□□ -0.64
PKD1-220ENST00000487932 EIF4EBP1Q13541 118 aaPredicted RBP11.04□□□□□ -0.64
PKD1-220ENST00000487932 ODF3L2Q3SX64 289 aa11.04□□□□□ -0.64
PKD1-220ENST00000487932 Q8N814 137 aa11.03□□□□□ -0.64
PKD1-220ENST00000487932 A0A087WYN8 130 aa11.03□□□□□ -0.64
PKD1-220ENST00000487932 ZNF295-AS1Q8N0V1 137 aa11.03□□□□□ -0.64
PKD1-220ENST00000487932 Q8N6K4 173 aa11.03□□□□□ -0.64
PKD1-220ENST00000487932 FSTL3O95633 263 aa11.03□□□□□ -0.64
PKD1-220ENST00000487932 H0Y9P7 68 aa11.02□□□□□ -0.64
PKD1-220ENST00000487932 SPACA4Q8TDM5 124 aa11.02□□□□□ -0.65
PKD1-220ENST00000487932 CRYGAP11844 174 aa11.02□□□□□ -0.65
PKD1-220ENST00000487932 C1orf195Q5TG92 126 aa11.02□□□□□ -0.65
PKD1-220ENST00000487932 PSPHP1O15172 72 aa11.02□□□□□ -0.65
PKD1-220ENST00000487932 HCG22E2RYF7 251 aa11.01□□□□□ -0.65
PKD1-220ENST00000487932 PMAIP1Q13794 54 aa11.01□□□□□ -0.65
PKD1-220ENST00000487932 C7orf65Q6ZTY9 151 aa11.01□□□□□ -0.65
PKD1-220ENST00000487932 LINC00575Q6W349 94 aa11.01□□□□□ -0.65
PKD1-220ENST00000487932 ALPK3Q96L96 1907 aa11.01□□□□□ -0.65
PKD1-220ENST00000487932 LINC00694P0DN24 101 aa11.01□□□□□ -0.65
PKD1-220ENST00000487932 LINC00242Q5T6M2 205 aa11.01□□□□□ -0.65
PKD1-220ENST00000487932 CACNA1AO00555 2505 aa11□□□□□ -0.65
PKD1-220ENST00000487932 LIMD2Q9BT23 127 aa11□□□□□ -0.65
PKD1-220ENST00000487932 NUP210LQ5VU65 1888 aa11□□□□□ -0.65
PKD1-220ENST00000487932 COX7CP15954 63 aa11□□□□□ -0.65
PKD1-220ENST00000487932 POLR2KP53803 58 aaKnown RBP11□□□□□ -0.65
PKD1-220ENST00000487932 FHL2Q14192 279 aa11□□□□□ -0.65
PKD1-220ENST00000487932 EXPH5Q8NEV8 1989 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms