RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 WFDC2Q14508 124 aa7.04□□□□□ -1.28
TOP3B-216ENST00000487485 HIST2H2BEQ16778 126 aa7.04□□□□□ -1.28
TOP3B-216ENST00000487485 PAPPA-AS1Q5QFB9 102 aa7.04□□□□□ -1.28
TOP3B-216ENST00000487485 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.04□□□□□ -1.28
TOP3B-216ENST00000487485 ZC2HC1BQ5TFG8 222 aa7.04□□□□□ -1.28
TOP3B-216ENST00000487485 HIST1H2BHQ93079 126 aa7.04□□□□□ -1.28
TOP3B-216ENST00000487485 AMELXQ99217 191 aa7.04□□□□□ -1.28
TOP3B-216ENST00000487485 HIST1H2BNQ99877 126 aa7.04□□□□□ -1.28
TOP3B-216ENST00000487485 HIST1H2BMQ99879 126 aa7.04□□□□□ -1.28
TOP3B-216ENST00000487485 UBR4Q5T4S7 5183 aa7.04□□□□□ -1.28
TOP3B-216ENST00000487485 SERF1AO75920 110 aa7.03□□□□□ -1.28
TOP3B-216ENST00000487485 FOXI1Q12951 378 aa7.03□□□□□ -1.28
TOP3B-216ENST00000487485 CD164L2Q6UWJ8 174 aa7.03□□□□□ -1.28
TOP3B-216ENST00000487485 LINC00173Q6ZV60 143 aa7.03□□□□□ -1.28
TOP3B-216ENST00000487485 C2orf88Q9BSF0 95 aa7.03□□□□□ -1.28
TOP3B-216ENST00000487485 USP17L23D6RBM5 183 aa7.02□□□□□ -1.29
TOP3B-216ENST00000487485 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.02□□□□□ -1.29
TOP3B-216ENST00000487485 NUPR1O60356 82 aa7.02□□□□□ -1.29
TOP3B-216ENST00000487485 LINC00310P59036 64 aa7.02□□□□□ -1.29
TOP3B-216ENST00000487485 PDZD11Q5EBL8 140 aa7.02□□□□□ -1.29
TOP3B-216ENST00000487485 FAM19A2Q8N3H0 131 aa7.02□□□□□ -1.29
TOP3B-216ENST00000487485 Q8N814 137 aa7.02□□□□□ -1.29
TOP3B-216ENST00000487485 UBE2D1P51668 147 aa7.01□□□□□ -1.29
TOP3B-216ENST00000487485 ATP5LO75964 103 aa7□□□□□ -1.29
TOP3B-216ENST00000487485 FUSP35637 526 aaKnown RBP eCLIP7□□□□□ -1.29
TOP3B-216ENST00000487485 XGP55808 180 aa7□□□□□ -1.29
TOP3B-216ENST00000487485 PMVKQ15126 192 aa7□□□□□ -1.29
TOP3B-216ENST00000487485 C14orf177Q52M58 125 aa7□□□□□ -1.29
TOP3B-216ENST00000487485 LINC00242Q5T6M2 205 aa7□□□□□ -1.29
TOP3B-216ENST00000487485 CFAP161Q6P656 301 aa7□□□□□ -1.29
TOP3B-216ENST00000487485 CST9LQ9H4G1 147 aa7□□□□□ -1.29
TOP3B-216ENST00000487485 PGPEP1Q9NXJ5 209 aa7□□□□□ -1.29
TOP3B-216ENST00000487485 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.99□□□□□ -1.29
TOP3B-216ENST00000487485 COX7A2LO14548 114 aa6.99□□□□□ -1.29
TOP3B-216ENST00000487485 PRSS1P07477 247 aa6.99□□□□□ -1.29
TOP3B-216ENST00000487485 MALP21145 153 aa6.99□□□□□ -1.29
TOP3B-216ENST00000487485 NDUFA6P56556 154 aa6.99□□□□□ -1.29
TOP3B-216ENST00000487485 COX6A2Q02221 97 aa6.99□□□□□ -1.29
TOP3B-216ENST00000487485 FAM19A3Q7Z5A8 133 aa6.99□□□□□ -1.29
TOP3B-216ENST00000487485 C5orf38Q86SI9 138 aa6.99□□□□□ -1.29
TOP3B-216ENST00000487485 C15orf56Q8N910 161 aa6.99□□□□□ -1.29
TOP3B-216ENST00000487485 IGHV3OR16-9A0A0B4J2B5 98 aa6.98□□□□□ -1.29
TOP3B-216ENST00000487485 IGHV1-58A0A0C4DH39 117 aa6.98□□□□□ -1.29
TOP3B-216ENST00000487485 A0A0J9YXV3 536 aa6.98□□□□□ -1.29
TOP3B-216ENST00000487485 SEC11AP67812 179 aa6.98□□□□□ -1.29
TOP3B-216ENST00000487485 Q5VSD8 79 aa6.98□□□□□ -1.29
TOP3B-216ENST00000487485 IGLV5-52A0A0A0MRZ9 124 aa6.97□□□□□ -1.29
TOP3B-216ENST00000487485 hDV102S1A0JD36 115 aa6.97□□□□□ -1.29
TOP3B-216ENST00000487485 LEPROTL1O95214 131 aa6.97□□□□□ -1.29
TOP3B-216ENST00000487485 NTN5Q8WTR8 489 aaPredicted RBP6.97□□□□□ -1.29
TOP3B-216ENST00000487485 IFI27L1Q96BM0 104 aa6.97□□□□□ -1.29
TOP3B-216ENST00000487485 GEMIN7Q9H840 131 aaKnown RBP6.97□□□□□ -1.29
TOP3B-216ENST00000487485 A0A087WZ39 114 aa6.96□□□□□ -1.3
TOP3B-216ENST00000487485 TINCRA0A1B0GVN0 87 aa6.96□□□□□ -1.3
TOP3B-216ENST00000487485 APOMO95445 188 aa6.96□□□□□ -1.3
TOP3B-216ENST00000487485 FABP4P15090 132 aa6.96□□□□□ -1.3
TOP3B-216ENST00000487485 HERVK_113P63121 156 aa6.96□□□□□ -1.3
TOP3B-216ENST00000487485 HIGD2BQ4VC39 106 aa6.96□□□□□ -1.3
TOP3B-216ENST00000487485 COA6Q5JTJ3 125 aaKnown RBP6.96□□□□□ -1.3
TOP3B-216ENST00000487485 CDPF1Q6NVV7 123 aa6.96□□□□□ -1.3
TOP3B-216ENST00000487485 GVQW2A0A096LPI5 108 aaPredicted RBP6.95□□□□□ -1.3
TOP3B-216ENST00000487485 ZNF561-AS1K7EIQ3 104 aa6.95□□□□□ -1.3
TOP3B-216ENST00000487485 HSPB8Q9UJY1 196 aa6.95□□□□□ -1.3
TOP3B-216ENST00000487485 IGHV3-64A0A075B6Q5 118 aa6.94□□□□□ -1.3
TOP3B-216ENST00000487485 TRAV12-1A0A0B4J245 112 aa6.94□□□□□ -1.3
TOP3B-216ENST00000487485 SMR3BP02814 79 aaPredicted RBP6.94□□□□□ -1.3
TOP3B-216ENST00000487485 SLPIP03973 132 aa6.94□□□□□ -1.3
TOP3B-216ENST00000487485 GCSHP23434 173 aa6.94□□□□□ -1.3
TOP3B-216ENST00000487485 LINC00526Q96FQ7 95 aa6.94□□□□□ -1.3
TOP3B-216ENST00000487485 CDKN2A-AS1Q9UH64 79 aa6.94□□□□□ -1.3
TOP3B-216ENST00000487485 CHTOPQ9Y3Y2 248 aaKnown RBP6.94□□□□□ -1.3
TOP3B-216ENST00000487485 HMCN2Q8NDA2 5059 aa6.93□□□□□ -1.3
TOP3B-216ENST00000487485 IGLV4-69A0A075B6H9 119 aa6.93□□□□□ -1.3
TOP3B-216ENST00000487485 H0Y8G0 127 aa6.93□□□□□ -1.3
TOP3B-216ENST00000487485 IGLC3P0DOY3 106 aa6.93□□□□□ -1.3
TOP3B-216ENST00000487485 KRTAP10-1P60331 282 aa6.93□□□□□ -1.3
TOP3B-216ENST00000487485 LINC01561Q8N1V8 128 aa6.93□□□□□ -1.3
TOP3B-216ENST00000487485 LINC00469Q8N7U9 141 aa6.93□□□□□ -1.3
TOP3B-216ENST00000487485 OR10D4PQ8NGN7 298 aa6.93□□□□□ -1.3
TOP3B-216ENST00000487485 ORAOV1Q8WV07 137 aa6.93□□□□□ -1.3
TOP3B-216ENST00000487485 IGLV5-45A0A087WSX0 123 aa6.92□□□□□ -1.3
TOP3B-216ENST00000487485 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.92□□□□□ -1.3
TOP3B-216ENST00000487485 CNBPP62633 177 aaKnown RBP6.92□□□□□ -1.3
TOP3B-216ENST00000487485 LINC01620Q4KN68 170 aa6.92□□□□□ -1.3
TOP3B-216ENST00000487485 CHAC1Q9BUX1 264 aa6.92□□□□□ -1.3
TOP3B-216ENST00000487485 MAP1LC3CQ9BXW4 147 aa6.92□□□□□ -1.3
TOP3B-216ENST00000487485 C11orf86A6NJI1 115 aa6.91□□□□□ -1.3
TOP3B-216ENST00000487485 F8VRH5 84 aa6.91□□□□□ -1.3
TOP3B-216ENST00000487485 S100A6P06703 90 aa6.91□□□□□ -1.3
TOP3B-216ENST00000487485 SPAG11BQ08648 103 aa6.91□□□□□ -1.3
TOP3B-216ENST00000487485 C9orf163Q8N9P6 203 aa6.91□□□□□ -1.3
TOP3B-216ENST00000487485 PACRGQ96M98 296 aaPredicted RBP6.91□□□□□ -1.3
TOP3B-216ENST00000487485 MRPL35Q9NZE8 188 aaKnown RBP6.91□□□□□ -1.3
TOP3B-216ENST00000487485 H3BRM9 83 aa6.9□□□□□ -1.3
TOP3B-216ENST00000487485 J3QL48 77 aa6.9□□□□□ -1.3
TOP3B-216ENST00000487485 ZNF22P17026 224 aaPredicted RBP6.9□□□□□ -1.3
TOP3B-216ENST00000487485 KIAA0087Q14695 138 aa6.9□□□□□ -1.3
TOP3B-216ENST00000487485 ODF1Q14990 250 aa6.9□□□□□ -1.3
TOP3B-216ENST00000487485 C2orf48Q96LS8 159 aa6.9□□□□□ -1.3
TOP3B-216ENST00000487485 CAMK2N2Q96S95 79 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms