RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 OR10D4PQ8NGN7 298 aa9.52□□□□□ -0.89
LIMS3-205ENST00000487150 CHCHD1Q96BP2 118 aaKnown RBP9.52□□□□□ -0.89
LIMS3-205ENST00000487150 IGHV3OR16-9A0A0B4J2B5 98 aa9.51□□□□□ -0.89
LIMS3-205ENST00000487150 F8WDY8 70 aa9.51□□□□□ -0.89
LIMS3-205ENST00000487150 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.51□□□□□ -0.89
LIMS3-205ENST00000487150 HERVK_113P63121 156 aa9.51□□□□□ -0.89
LIMS3-205ENST00000487150 Q6ZSA8 131 aa9.51□□□□□ -0.89
LIMS3-205ENST00000487150 LINC01561Q8N1V8 128 aa9.51□□□□□ -0.89
LIMS3-205ENST00000487150 C5orf38Q86SI9 138 aa9.5□□□□□ -0.89
LIMS3-205ENST00000487150 A0A087WZ39 114 aa9.49□□□□□ -0.89
LIMS3-205ENST00000487150 ATP5LO75964 103 aa9.49□□□□□ -0.89
LIMS3-205ENST00000487150 LINC00242Q5T6M2 205 aa9.49□□□□□ -0.89
LIMS3-205ENST00000487150 LINC00173Q6ZV60 143 aa9.49□□□□□ -0.89
LIMS3-205ENST00000487150 FAM19A3Q7Z5A8 133 aa9.49□□□□□ -0.89
LIMS3-205ENST00000487150 C2orf48Q96LS8 159 aa9.49□□□□□ -0.89
LIMS3-205ENST00000487150 CARD19Q96LW7 228 aa9.49□□□□□ -0.89
LIMS3-205ENST00000487150 GEMIN7Q9H840 131 aaKnown RBP9.49□□□□□ -0.89
LIMS3-205ENST00000487150 DNAH5Q8TE73 4624 aa9.49□□□□□ -0.89
LIMS3-205ENST00000487150 TRGC2P03986 189 aa9.48□□□□□ -0.89
LIMS3-205ENST00000487150 SPAG11BQ08648 103 aa9.48□□□□□ -0.89
LIMS3-205ENST00000487150 BAGE3Q86Y29 109 aa9.48□□□□□ -0.89
LIMS3-205ENST00000487150 COLCA2A8K830 154 aa9.47□□□□□ -0.89
LIMS3-205ENST00000487150 SYCNQ0VAF6 134 aa9.47□□□□□ -0.89
LIMS3-205ENST00000487150 PMVKQ15126 192 aa9.47□□□□□ -0.89
LIMS3-205ENST00000487150 ORAOV1Q8WV07 137 aa9.47□□□□□ -0.89
LIMS3-205ENST00000487150 HSBP1O75506 76 aa9.46□□□□□ -0.9
LIMS3-205ENST00000487150 LINC01620Q4KN68 170 aa9.46□□□□□ -0.9
LIMS3-205ENST00000487150 PACRGQ96M98 296 aaPredicted RBP9.46□□□□□ -0.9
LIMS3-205ENST00000487150 CAMK2N2Q96S95 79 aa9.46□□□□□ -0.9
LIMS3-205ENST00000487150 LINC00474Q9P2X8 69 aa9.46□□□□□ -0.9
LIMS3-205ENST00000487150 KIAA1109Q2LD37 5005 aa9.46□□□□□ -0.9
LIMS3-205ENST00000487150 IGLV4-69A0A075B6H9 119 aa9.45□□□□□ -0.9
LIMS3-205ENST00000487150 TINCRA0A1B0GVN0 87 aa9.45□□□□□ -0.9
LIMS3-205ENST00000487150 S100A1P23297 94 aa9.45□□□□□ -0.9
LIMS3-205ENST00000487150 SDIM1Q6ZPB5 146 aa9.45□□□□□ -0.9
LIMS3-205ENST00000487150 URB1-AS1Q96HZ7 61 aa9.45□□□□□ -0.9
LIMS3-205ENST00000487150 CHAC1Q9BUX1 264 aa9.45□□□□□ -0.9
LIMS3-205ENST00000487150 CST9LQ9H4G1 147 aa9.45□□□□□ -0.9
LIMS3-205ENST00000487150 A0A096LNJ9 63 aa9.44□□□□□ -0.9
LIMS3-205ENST00000487150 XGP55808 180 aa9.44□□□□□ -0.9
LIMS3-205ENST00000487150 PDZD11Q5EBL8 140 aa9.44□□□□□ -0.9
LIMS3-205ENST00000487150 Q8N1X5 172 aa9.44□□□□□ -0.9
LIMS3-205ENST00000487150 H3BRM9 83 aa9.43□□□□□ -0.9
LIMS3-205ENST00000487150 NDUFA1O15239 70 aa9.43□□□□□ -0.9
LIMS3-205ENST00000487150 SLPIP03973 132 aa9.43□□□□□ -0.9
LIMS3-205ENST00000487150 PRSS2P07478 247 aa9.43□□□□□ -0.9
LIMS3-205ENST00000487150 LINC00469Q8N7U9 141 aa9.43□□□□□ -0.9
LIMS3-205ENST00000487150 FAM30AQ9NZY2 134 aa9.43□□□□□ -0.9
LIMS3-205ENST00000487150 COX6A2Q02221 97 aa9.42□□□□□ -0.9
LIMS3-205ENST00000487150 PMCHL1Q16048 86 aa9.42□□□□□ -0.9
LIMS3-205ENST00000487150 RNF151Q2KHN1 245 aa9.42□□□□□ -0.9
LIMS3-205ENST00000487150 ZC2HC1BQ5TFG8 222 aa9.42□□□□□ -0.9
LIMS3-205ENST00000487150 HERC2O95714 4834 aa9.42□□□□□ -0.9
LIMS3-205ENST00000487150 RYR1P21817 5038 aa9.41□□□□□ -0.9
LIMS3-205ENST00000487150 APOBP04114 4563 aaKnown RBP9.41□□□□□ -0.9
LIMS3-205ENST00000487150 IGLV5-45A0A087WSX0 123 aa9.41□□□□□ -0.9
LIMS3-205ENST00000487150 FAM229AH3BQW9 127 aa9.41□□□□□ -0.9
LIMS3-205ENST00000487150 NDUFA6P56556 154 aa9.41□□□□□ -0.9
LIMS3-205ENST00000487150 CIRBPQ14011 172 aaKnown RBP9.41□□□□□ -0.9
LIMS3-205ENST00000487150 SCXQ7RTU7 201 aa9.41□□□□□ -0.9
LIMS3-205ENST00000487150 MRPL35Q9NZE8 188 aaKnown RBP9.41□□□□□ -0.9
LIMS3-205ENST00000487150 HSPG2P98160 4391 aa9.4□□□□□ -0.9
LIMS3-205ENST00000487150 A0A0J9YXV3 536 aa9.4□□□□□ -0.9
LIMS3-205ENST00000487150 LOC107984640A0A0U1RRK4 108 aa9.4□□□□□ -0.9
LIMS3-205ENST00000487150 SCO1O75880 301 aa9.4□□□□□ -0.9
LIMS3-205ENST00000487150 CXCL5P42830 114 aa9.4□□□□□ -0.9
LIMS3-205ENST00000487150 Q8IZM0 81 aa9.4□□□□□ -0.9
LIMS3-205ENST00000487150 LINC00526Q96FQ7 95 aa9.4□□□□□ -0.9
LIMS3-205ENST00000487150 CDKN2A-AS1Q9UH64 79 aa9.4□□□□□ -0.9
LIMS3-205ENST00000487150 EPM2AB3EWF7 344 aa9.39□□□□□ -0.91
LIMS3-205ENST00000487150 SERF1AO75920 110 aa9.39□□□□□ -0.91
LIMS3-205ENST00000487150 IGLC3P0DOY3 106 aa9.39□□□□□ -0.91
LIMS3-205ENST00000487150 CKS1BP61024 79 aa9.39□□□□□ -0.91
LIMS3-205ENST00000487150 Q6ZRU5 148 aa9.39□□□□□ -0.91
LIMS3-205ENST00000487150 IFI27L1Q96BM0 104 aa9.39□□□□□ -0.91
LIMS3-205ENST00000487150 DPH3Q96FX2 82 aa9.39□□□□□ -0.91
LIMS3-205ENST00000487150 HSPB8Q9UJY1 196 aa9.39□□□□□ -0.91
LIMS3-205ENST00000487150 TRAV12-1A0A0B4J245 112 aa9.38□□□□□ -0.91
LIMS3-205ENST00000487150 TRBV30A0A0K0K1B3 111 aa9.38□□□□□ -0.91
LIMS3-205ENST00000487150 C6orf226Q5I0X4 101 aa9.38□□□□□ -0.91
LIMS3-205ENST00000487150 CIRBP-AS1Q8TBR5 109 aa9.38□□□□□ -0.91
LIMS3-205ENST00000487150 SPACA4Q8TDM5 124 aa9.38□□□□□ -0.91
LIMS3-205ENST00000487150 LEPROTL1O95214 131 aa9.37□□□□□ -0.91
LIMS3-205ENST00000487150 TOMM7Q9P0U1 55 aa9.37□□□□□ -0.91
LIMS3-205ENST00000487150 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.37□□□□□ -0.91
LIMS3-205ENST00000487150 SMIM1B2RUZ4 78 aa9.36□□□□□ -0.91
LIMS3-205ENST00000487150 ATP6V1G1O75348 118 aa9.36□□□□□ -0.91
LIMS3-205ENST00000487150 PLA2G1BP04054 148 aaKnown RBP9.36□□□□□ -0.91
LIMS3-205ENST00000487150 HAMPP81172 84 aa9.36□□□□□ -0.91
LIMS3-205ENST00000487150 KIAA0087Q14695 138 aa9.36□□□□□ -0.91
LIMS3-205ENST00000487150 IGKV2-24A0A0C4DH68 120 aa9.35□□□□□ -0.91
LIMS3-205ENST00000487150 MAJINQ3KP22 176 aa9.35□□□□□ -0.91
LIMS3-205ENST00000487150 Q5VSD8 79 aa9.35□□□□□ -0.91
LIMS3-205ENST00000487150 SFTA2Q6UW10 78 aa9.35□□□□□ -0.91
LIMS3-205ENST00000487150 CHTOPQ9Y3Y2 248 aaKnown RBP9.35□□□□□ -0.91
LIMS3-205ENST00000487150 A0A096LNI7 61 aa9.34□□□□□ -0.91
LIMS3-205ENST00000487150 HIST1H2BKO60814 126 aa9.34□□□□□ -0.91
LIMS3-205ENST00000487150 HIST1H2BJP06899 126 aa9.34□□□□□ -0.91
LIMS3-205ENST00000487150 TLX1NBP0CAT3 122 aa9.34□□□□□ -0.91
LIMS3-205ENST00000487150 HIST1H2BOP23527 126 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms