RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 CCL25O15444 150 aa5.87□□□□□ -1.47
NUDCD3-209ENST00000487118 C2orf91Q6ZV80 131 aa5.87□□□□□ -1.47
NUDCD3-209ENST00000487118 LINC00469Q8N7U9 141 aa5.87□□□□□ -1.47
NUDCD3-209ENST00000487118 MAPKAPK5-AS1Q8N8E1 139 aa5.87□□□□□ -1.47
NUDCD3-209ENST00000487118 CDKN2A-AS1Q9UH64 79 aa5.87□□□□□ -1.47
NUDCD3-209ENST00000487118 IGHV1-58A0A0C4DH39 117 aa5.86□□□□□ -1.47
NUDCD3-209ENST00000487118 LINC00959A0A1B0GUT2 108 aa5.86□□□□□ -1.47
NUDCD3-209ENST00000487118 H3BRM9 83 aa5.86□□□□□ -1.47
NUDCD3-209ENST00000487118 TSPEAR-AS2P59090 65 aa5.86□□□□□ -1.47
NUDCD3-209ENST00000487118 Q8N3U1 123 aa5.86□□□□□ -1.47
NUDCD3-209ENST00000487118 PLEKHB2Q96CS7 222 aa5.86□□□□□ -1.47
NUDCD3-209ENST00000487118 TTTY13Q9BZ97 58 aa5.86□□□□□ -1.47
NUDCD3-209ENST00000487118 HIGD1BQ9P298 99 aa5.86□□□□□ -1.47
NUDCD3-209ENST00000487118 STARD9Q9P2P6 4700 aa5.86□□□□□ -1.47
NUDCD3-209ENST00000487118 IGLV5-39A0A0G2JS06 123 aa5.85□□□□□ -1.47
NUDCD3-209ENST00000487118 MYMXA0A1B0GTQ4 84 aa5.85□□□□□ -1.47
NUDCD3-209ENST00000487118 C3orf84H3BNL1 204 aa5.85□□□□□ -1.47
NUDCD3-209ENST00000487118 J3QQQ9 107 aa5.85□□□□□ -1.47
NUDCD3-209ENST00000487118 ANGP03950 147 aaKnown RBP5.85□□□□□ -1.47
NUDCD3-209ENST00000487118 CTAG1AP78358 180 aa5.85□□□□□ -1.47
NUDCD3-209ENST00000487118 WFDC10BQ8IUB3 73 aa5.85□□□□□ -1.47
NUDCD3-209ENST00000487118 PRR34Q9NV39 138 aa5.85□□□□□ -1.47
NUDCD3-209ENST00000487118 TRAV8-3A0A0A6YYJ7 113 aa5.84□□□□□ -1.47
NUDCD3-209ENST00000487118 IGHV3OR16-9A0A0B4J2B5 98 aa5.84□□□□□ -1.47
NUDCD3-209ENST00000487118 IGKV3OR2-268A0A0C4DH90 116 aa5.84□□□□□ -1.47
NUDCD3-209ENST00000487118 SMIM1B2RUZ4 78 aa5.84□□□□□ -1.47
NUDCD3-209ENST00000487118 SPINK8P0C7L1 97 aa5.84□□□□□ -1.47
NUDCD3-209ENST00000487118 IGHV3-30-3P0DP02 117 aa5.84□□□□□ -1.47
NUDCD3-209ENST00000487118 REG3AQ06141 175 aa5.84□□□□□ -1.47
NUDCD3-209ENST00000487118 SS18Q15532 418 aa5.84□□□□□ -1.47
NUDCD3-209ENST00000487118 LINC01561Q8N1V8 128 aa5.84□□□□□ -1.47
NUDCD3-209ENST00000487118 LINC00269Q8N2A0 174 aa5.84□□□□□ -1.47
NUDCD3-209ENST00000487118 IGHV3-64A0A075B6Q5 118 aa5.83□□□□□ -1.48
NUDCD3-209ENST00000487118 A0A087WZ39 114 aa5.83□□□□□ -1.48
NUDCD3-209ENST00000487118 ZNF815PA8K554 130 aa5.83□□□□□ -1.48
NUDCD3-209ENST00000487118 IGLL5B9A064 214 aa5.83□□□□□ -1.48
NUDCD3-209ENST00000487118 LGALS3P17931 250 aaKnown RBP5.83□□□□□ -1.48
NUDCD3-209ENST00000487118 LINC01556Q5JQF7 62 aa5.83□□□□□ -1.48
NUDCD3-209ENST00000487118 CLPSL2Q6UWE3 100 aa5.83□□□□□ -1.48
NUDCD3-209ENST00000487118 M0R143 59 aa5.82□□□□□ -1.48
NUDCD3-209ENST00000487118 IGHV3-30P01768 117 aa5.82□□□□□ -1.48
NUDCD3-209ENST00000487118 IGHV3-33P01772 117 aa5.82□□□□□ -1.48
NUDCD3-209ENST00000487118 DNAH10OSP0CZ25 163 aa5.82□□□□□ -1.48
NUDCD3-209ENST00000487118 IGHV3-30-5P0DP03 117 aa5.82□□□□□ -1.48
NUDCD3-209ENST00000487118 CCL18P55774 89 aa5.82□□□□□ -1.48
NUDCD3-209ENST00000487118 CASC10Q5T4H9 136 aa5.82□□□□□ -1.48
NUDCD3-209ENST00000487118 ZFAND6Q6FIF0 208 aa5.82□□□□□ -1.48
NUDCD3-209ENST00000487118 ENHOQ6UWT2 76 aa5.82□□□□□ -1.48
NUDCD3-209ENST00000487118 UPK3BQ9BT76 320 aa5.82□□□□□ -1.48
NUDCD3-209ENST00000487118 SNHG12Q9BXW3 62 aa5.82□□□□□ -1.48
NUDCD3-209ENST00000487118 KLK12Q9UKR0 248 aa5.82□□□□□ -1.48
NUDCD3-209ENST00000487118 APLNQ9ULZ1 77 aa5.82□□□□□ -1.48
NUDCD3-209ENST00000487118 LINC00588Q9Y4M8 146 aa5.82□□□□□ -1.48
NUDCD3-209ENST00000487118 UBR4Q5T4S7 5183 aa5.81□□□□□ -1.48
NUDCD3-209ENST00000487118 NUPR2A6NF83 97 aa5.81□□□□□ -1.48
NUDCD3-209ENST00000487118 EREGO14944 169 aa5.81□□□□□ -1.48
NUDCD3-209ENST00000487118 HSD52Q0P140 79 aa5.81□□□□□ -1.48
NUDCD3-209ENST00000487118 CD164L2Q6UWJ8 174 aa5.81□□□□□ -1.48
NUDCD3-209ENST00000487118 CHCHD10Q8WYQ3 142 aaPredicted RBP5.81□□□□□ -1.48
NUDCD3-209ENST00000487118 TRAV8-4A0A0B4J246 113 aa5.8□□□□□ -1.48
NUDCD3-209ENST00000487118 NDUFA1O15239 70 aa5.8□□□□□ -1.48
NUDCD3-209ENST00000487118 XCL1P47992 114 aa5.8□□□□□ -1.48
NUDCD3-209ENST00000487118 FOXI1Q12951 378 aa5.8□□□□□ -1.48
NUDCD3-209ENST00000487118 TAL2Q16559 108 aa5.8□□□□□ -1.48
NUDCD3-209ENST00000487118 C5orf38Q86SI9 138 aa5.8□□□□□ -1.48
NUDCD3-209ENST00000487118 C10orf126Q8N4M7 172 aa5.8□□□□□ -1.48
NUDCD3-209ENST00000487118 SPANXB1Q9NS25 103 aaPredicted RBP5.8□□□□□ -1.48
NUDCD3-209ENST00000487118 NDUFA12Q9UI09 145 aa5.8□□□□□ -1.48
NUDCD3-209ENST00000487118 PLECQ15149 4684 aaKnown RBP5.8□□□□□ -1.48
NUDCD3-209ENST00000487118 FRAS1Q86XX4 4008 aa5.8□□□□□ -1.48
NUDCD3-209ENST00000487118 COX7A2LO14548 114 aa5.79□□□□□ -1.48
NUDCD3-209ENST00000487118 CRPP02741 224 aa5.79□□□□□ -1.48
NUDCD3-209ENST00000487118 HINT1P49773 126 aaPredicted RBP5.79□□□□□ -1.48
NUDCD3-209ENST00000487118 MIAQ16674 131 aa5.79□□□□□ -1.48
NUDCD3-209ENST00000487118 BVES-AS1Q5T3Y7 98 aa5.79□□□□□ -1.48
NUDCD3-209ENST00000487118 KRTAP26-1Q6PEX3 210 aa5.79□□□□□ -1.48
NUDCD3-209ENST00000487118 UBE2WQ96B02 151 aa5.79□□□□□ -1.48
NUDCD3-209ENST00000487118 KLK5Q9Y337 293 aaPredicted RBP5.79□□□□□ -1.48
NUDCD3-209ENST00000487118 IGLV10-54A0A075B6I4 117 aa5.78□□□□□ -1.48
NUDCD3-209ENST00000487118 A0A0J9YXY3 114 aa5.78□□□□□ -1.48
NUDCD3-209ENST00000487118 GAGE12HA6NDE8 117 aa5.78□□□□□ -1.48
NUDCD3-209ENST00000487118 LBHQ53QV2 105 aaPredicted RBP5.78□□□□□ -1.48
NUDCD3-209ENST00000487118 SCGB1D4Q6XE38 83 aa5.78□□□□□ -1.48
NUDCD3-209ENST00000487118 COX7B2Q8TF08 81 aa5.78□□□□□ -1.48
NUDCD3-209ENST00000487118 ZNF625Q96I27 306 aaPredicted RBP5.78□□□□□ -1.48
NUDCD3-209ENST00000487118 IBA57-AS1B1ANH7 110 aa5.77□□□□□ -1.49
NUDCD3-209ENST00000487118 TIMM17BO60830 172 aa5.77□□□□□ -1.49
NUDCD3-209ENST00000487118 HERV-K104P63124 156 aa5.77□□□□□ -1.49
NUDCD3-209ENST00000487118 CEND1Q8N111 149 aa5.77□□□□□ -1.49
NUDCD3-209ENST00000487118 LITAFQ99732 161 aa5.77□□□□□ -1.49
NUDCD3-209ENST00000487118 TM2D2Q9BX73 214 aa5.77□□□□□ -1.49
NUDCD3-209ENST00000487118 VPS13DQ5THJ4 4388 aa5.76□□□□□ -1.49
NUDCD3-209ENST00000487118 K7EP13 123 aa5.76□□□□□ -1.49
NUDCD3-209ENST00000487118 BATFQ16520 125 aa5.76□□□□□ -1.49
NUDCD3-209ENST00000487118 SFTA2Q6UW10 78 aa5.76□□□□□ -1.49
NUDCD3-209ENST00000487118 Q8IZM0 81 aa5.76□□□□□ -1.49
NUDCD3-209ENST00000487118 MUC7Q8TAX7 377 aa5.76□□□□□ -1.49
NUDCD3-209ENST00000487118 ORAOV1Q8WV07 137 aa5.76□□□□□ -1.49
NUDCD3-209ENST00000487118 HIST1H4GQ99525 98 aa5.76□□□□□ -1.49
NUDCD3-209ENST00000487118 Q9H8V8 135 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms