RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 H2BFSP57053 126 aa4.52□□□□□ -1.69
XRN1-212ENST00000486211 SPAG11AQ6PDA7 123 aa4.52□□□□□ -1.69
XRN1-212ENST00000486211 ORAOV1Q8WV07 137 aa4.52□□□□□ -1.69
XRN1-212ENST00000486211 TRAV13-1A0A0B4J241 112 aa4.51□□□□□ -1.69
XRN1-212ENST00000486211 CCDC160A6NGH7 325 aa4.51□□□□□ -1.69
XRN1-212ENST00000486211 NDUFC2-KCTD14E9PQ53 114 aa4.51□□□□□ -1.69
XRN1-212ENST00000486211 MPC2O95563 127 aa4.51□□□□□ -1.69
XRN1-212ENST00000486211 KRTAP10-7P60409 375 aaPredicted RBP4.51□□□□□ -1.69
XRN1-212ENST00000486211 SERF2P84101 59 aa4.51□□□□□ -1.69
XRN1-212ENST00000486211 RNASE13Q5GAN3 156 aaKnown RBP4.51□□□□□ -1.69
XRN1-212ENST00000486211 MRAP2Q96G30 205 aa4.51□□□□□ -1.69
XRN1-212ENST00000486211 TCEAL7Q9BRU2 100 aa4.51□□□□□ -1.69
XRN1-212ENST00000486211 TNFSF18Q9UNG2 199 aa4.51□□□□□ -1.69
XRN1-212ENST00000486211 IGLV8-61A0A075B6I0 122 aa4.5□□□□□ -1.69
XRN1-212ENST00000486211 I3L3M4 83 aa4.5□□□□□ -1.69
XRN1-212ENST00000486211 FHITP49789 147 aa4.5□□□□□ -1.69
XRN1-212ENST00000486211 DEFA1P59665 94 aa4.5□□□□□ -1.69
XRN1-212ENST00000486211 KRTAP6-3Q3LI67 103 aa4.5□□□□□ -1.69
XRN1-212ENST00000486211 LBHQ53QV2 105 aaPredicted RBP4.5□□□□□ -1.69
XRN1-212ENST00000486211 PCOTHQ58A44 107 aa4.5□□□□□ -1.69
XRN1-212ENST00000486211 BAGE2Q86Y30 109 aa4.5□□□□□ -1.69
XRN1-212ENST00000486211 IGHV3OR16-9A0A0B4J2B5 98 aa4.49□□□□□ -1.69
XRN1-212ENST00000486211 CTXND1A0A1B0GTU2 59 aa4.49□□□□□ -1.69
XRN1-212ENST00000486211 KIAA0087Q14695 138 aa4.49□□□□□ -1.69
XRN1-212ENST00000486211 DAND5Q8N907 189 aa4.49□□□□□ -1.69
XRN1-212ENST00000486211 RNASE7Q9H1E1 156 aaKnown RBP4.49□□□□□ -1.69
XRN1-212ENST00000486211 CYTL1Q9NRR1 136 aa4.49□□□□□ -1.69
XRN1-212ENST00000486211 TMEM242Q9NWH2 141 aa4.49□□□□□ -1.69
XRN1-212ENST00000486211 UBE2D4Q9Y2X8 147 aa4.49□□□□□ -1.69
XRN1-212ENST00000486211 TRBV30A0A0K0K1B3 111 aa4.48□□□□□ -1.69
XRN1-212ENST00000486211 F2Z2F3 143 aa4.48□□□□□ -1.69
XRN1-212ENST00000486211 PMCHP20382 165 aa4.48□□□□□ -1.69
XRN1-212ENST00000486211 LYZL1Q6UWQ5 148 aa4.48□□□□□ -1.69
XRN1-212ENST00000486211 MRPL55Q7Z7F7 128 aaKnown RBP4.48□□□□□ -1.69
XRN1-212ENST00000486211 STOML3Q8TAV4 291 aa4.48□□□□□ -1.69
XRN1-212ENST00000486211 PACRGQ96M98 296 aaPredicted RBP4.48□□□□□ -1.69
XRN1-212ENST00000486211 TP73-AS1Q9UF72 201 aa4.48□□□□□ -1.69
XRN1-212ENST00000486211 CSDC2Q9Y534 153 aaKnown RBP4.48□□□□□ -1.69
XRN1-212ENST00000486211 TRBV6-5A0A0K0K1A5 114 aa4.47□□□□□ -1.69
XRN1-212ENST00000486211 C7orf77A4D0Y5 90 aa4.47□□□□□ -1.69
XRN1-212ENST00000486211 PAGE4O60829 102 aa4.47□□□□□ -1.69
XRN1-212ENST00000486211 S100A9P06702 114 aaKnown RBP4.47□□□□□ -1.69
XRN1-212ENST00000486211 CFC1P0CG37 223 aa4.47□□□□□ -1.69
XRN1-212ENST00000486211 PET100P0DJ07 73 aa4.47□□□□□ -1.69
XRN1-212ENST00000486211 FOXA3P55318 350 aaPredicted RBP4.47□□□□□ -1.69
XRN1-212ENST00000486211 CST9LP1Q5W188 147 aa4.47□□□□□ -1.69
XRN1-212ENST00000486211 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.47□□□□□ -1.69
XRN1-212ENST00000486211 C2orf82Q6UX34 121 aa4.47□□□□□ -1.69
XRN1-212ENST00000486211 Q6ZUT4 128 aa4.47□□□□□ -1.69
XRN1-212ENST00000486211 KIR2DL4Q99706 377 aa4.47□□□□□ -1.69
XRN1-212ENST00000486211 RPL37AP8A6NKH3 93 aa4.46□□□□□ -1.7
XRN1-212ENST00000486211 NOL3O60936 208 aaKnown RBP4.46□□□□□ -1.7
XRN1-212ENST00000486211 UPK1BO75841 260 aa4.46□□□□□ -1.7
XRN1-212ENST00000486211 RPS20P60866 119 aaKnown RBP4.46□□□□□ -1.7
XRN1-212ENST00000486211 CNFNQ9BYD5 112 aa4.46□□□□□ -1.7
XRN1-212ENST00000486211 UBE2AP49459 152 aa4.45□□□□□ -1.7
XRN1-212ENST00000486211 C9orf62Q8N4C0 152 aa4.45□□□□□ -1.7
XRN1-212ENST00000486211 LINC00469Q8N7U9 141 aa4.45□□□□□ -1.7
XRN1-212ENST00000486211 FAM104AQ969W3 186 aa4.45□□□□□ -1.7
XRN1-212ENST00000486211 LINC00167Q96N53 147 aa4.45□□□□□ -1.7
XRN1-212ENST00000486211 FAM210AQ96ND0 272 aa4.45□□□□□ -1.7
XRN1-212ENST00000486211 XAGE1AQ9HD64 81 aa4.45□□□□□ -1.7
XRN1-212ENST00000486211 MAP1LC3B2A6NCE7 125 aa4.44□□□□□ -1.7
XRN1-212ENST00000486211 ZNF727A8MUV8 499 aa4.44□□□□□ -1.7
XRN1-212ENST00000486211 POLR2KP53803 58 aaKnown RBP4.44□□□□□ -1.7
XRN1-212ENST00000486211 SUMO2P61956 95 aaKnown RBP4.44□□□□□ -1.7
XRN1-212ENST00000486211 TWIST1Q15672 202 aa4.44□□□□□ -1.7
XRN1-212ENST00000486211 TEX261Q6UWH6 196 aa4.44□□□□□ -1.7
XRN1-212ENST00000486211 COX6B2Q6YFQ2 88 aa4.44□□□□□ -1.7
XRN1-212ENST00000486211 MARVELD1Q9BSK0 173 aa4.44□□□□□ -1.7
XRN1-212ENST00000486211 CCDC32Q9BV29 185 aa4.44□□□□□ -1.7
XRN1-212ENST00000486211 MAP1LC3BQ9GZQ8 125 aa4.44□□□□□ -1.7
XRN1-212ENST00000486211 TRBV27A0A0K0K1C4 114 aa4.43□□□□□ -1.7
XRN1-212ENST00000486211 FAM240BA0A1B0GVZ2 78 aa4.43□□□□□ -1.7
XRN1-212ENST00000486211 PRYO14603 147 aa4.43□□□□□ -1.7
XRN1-212ENST00000486211 IFNA1P01562 189 aa4.43□□□□□ -1.7
XRN1-212ENST00000486211 Q8N377 158 aa4.43□□□□□ -1.7
XRN1-212ENST00000486211 Q8NBF4 154 aa4.43□□□□□ -1.7
XRN1-212ENST00000486211 PLEKHB2Q96CS7 222 aa4.43□□□□□ -1.7
XRN1-212ENST00000486211 SPINK1P00995 79 aa4.42□□□□□ -1.7
XRN1-212ENST00000486211 RPL35P42766 123 aaKnown RBP4.42□□□□□ -1.7
XRN1-212ENST00000486211 PRLHP81277 87 aa4.42□□□□□ -1.7
XRN1-212ENST00000486211 PNRC1Q12796 327 aaPredicted RBP4.42□□□□□ -1.7
XRN1-212ENST00000486211 KRTAP5-11Q6L8G4 156 aa4.42□□□□□ -1.7
XRN1-212ENST00000486211 TMUB2Q71RG4 321 aa4.42□□□□□ -1.7
XRN1-212ENST00000486211 ST20Q9HBF5 79 aa4.42□□□□□ -1.7
XRN1-212ENST00000486211 NDUFA12Q9UI09 145 aa4.42□□□□□ -1.7
XRN1-212ENST00000486211 XKRY2A2RUG3 117 aa4.41□□□□□ -1.7
XRN1-212ENST00000486211 TIMM21Q9BVV7 248 aa4.41□□□□□ -1.7
XRN1-212ENST00000486211 RAB19A4D1S5 217 aa4.4□□□□□ -1.71
XRN1-212ENST00000486211 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.71
XRN1-212ENST00000486211 CENPWQ5EE01 88 aa4.4□□□□□ -1.71
XRN1-212ENST00000486211 RPL7L1Q6DKI1 246 aaKnown RBP4.4□□□□□ -1.71
XRN1-212ENST00000486211 FAM19A2Q8N3H0 131 aa4.4□□□□□ -1.71
XRN1-212ENST00000486211 NEBP20929 6669 aa4.4□□□□□ -1.71
XRN1-212ENST00000486211 RPL32P62910 135 aaKnown RBP4.39□□□□□ -1.71
XRN1-212ENST00000486211 SMAGPQ0VAQ4 97 aa4.39□□□□□ -1.71
XRN1-212ENST00000486211 AKR1C8PQ5T2L2 129 aa4.39□□□□□ -1.71
XRN1-212ENST00000486211 IGLV5-37A0A075B6J1 123 aa4.38□□□□□ -1.71
XRN1-212ENST00000486211 RPS29P62273 56 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms