RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 TNXBP22105 4242 aa-0.37□□□□□ -2.47
GCFC2-209ENST00000486016 LPAP08519 4548 aa-0.37□□□□□ -2.47
GCFC2-209ENST00000486016 NALCNQ8IZF0 1738 aa-0.37□□□□□ -2.47
GCFC2-209ENST00000486016 A0A1B0GV90 55 aa-0.37□□□□□ -2.47
GCFC2-209ENST00000486016 FAM24AA6NFZ4 105 aa-0.37□□□□□ -2.47
GCFC2-209ENST00000486016 DLEU1O43261 78 aa-0.37□□□□□ -2.47
GCFC2-209ENST00000486016 ATP5EP56381 51 aaPredicted RBP-0.37□□□□□ -2.47
GCFC2-209ENST00000486016 GNG11P61952 73 aa-0.37□□□□□ -2.47
GCFC2-209ENST00000486016 C10orf113Q5VZT2 155 aa-0.37□□□□□ -2.47
GCFC2-209ENST00000486016 FAM167A-AS1Q96KT0 104 aa-0.37□□□□□ -2.47
GCFC2-209ENST00000486016 ARL2-SNX15V9GYD0 113 aa-0.37□□□□□ -2.47
GCFC2-209ENST00000486016 BTAF1O14981 1849 aa-0.37□□□□□ -2.47
GCFC2-209ENST00000486016 MYOM2P54296 1465 aa-0.37□□□□□ -2.47
GCFC2-209ENST00000486016 HMGXB3Q12766 1538 aa-0.38□□□□□ -2.47
GCFC2-209ENST00000486016 TSC2P49815 1807 aa-0.38□□□□□ -2.47
GCFC2-209ENST00000486016 EFCAB10A6NFE3 127 aa-0.38□□□□□ -2.47
GCFC2-209ENST00000486016 UBA52P62987 128 aaKnown RBP-0.38□□□□□ -2.47
GCFC2-209ENST00000486016 WHAMMP3Q1A5X7 153 aa-0.38□□□□□ -2.47
GCFC2-209ENST00000486016 TULP4Q9NRJ4 1543 aa-0.38□□□□□ -2.47
GCFC2-209ENST00000486016 TET3O43151 1660 aa-0.39□□□□□ -2.47
GCFC2-209ENST00000486016 FLNAP21333 2647 aaKnown RBP-0.39□□□□□ -2.47
GCFC2-209ENST00000486016 GAPVD1Q14C86 1478 aa-0.39□□□□□ -2.47
GCFC2-209ENST00000486016 Q0VG73 95 aa-0.39□□□□□ -2.47
GCFC2-209ENST00000486016 IER3IP1Q9Y5U9 82 aa-0.39□□□□□ -2.47
GCFC2-209ENST00000486016 EHBP1L1Q8N3D4 1523 aa-0.39□□□□□ -2.47
GCFC2-209ENST00000486016 SCAPERQ9BY12 1400 aa-0.39□□□□□ -2.47
GCFC2-209ENST00000486016 KMT2AQ03164 3969 aa-0.39□□□□□ -2.47
GCFC2-209ENST00000486016 MAGI1Q96QZ7 1491 aaPredicted RBP-0.4□□□□□ -2.47
GCFC2-209ENST00000486016 TRBV7-4A0A0J9YYF1 115 aa-0.4□□□□□ -2.47
GCFC2-209ENST00000486016 LINC00959A0A1B0GUT2 108 aa-0.4□□□□□ -2.47
GCFC2-209ENST00000486016 SFTA2Q6UW10 78 aa-0.4□□□□□ -2.47
GCFC2-209ENST00000486016 MANBALQ9NQG1 85 aa-0.4□□□□□ -2.47
GCFC2-209ENST00000486016 PIEZO2Q9H5I5 2752 aa-0.4□□□□□ -2.47
GCFC2-209ENST00000486016 MAP1BP46821 2468 aaKnown RBP-0.41□□□□□ -2.47
GCFC2-209ENST00000486016 F6UZH7 168 aa-0.41□□□□□ -2.48
GCFC2-209ENST00000486016 CORTO00230 105 aa-0.41□□□□□ -2.48
GCFC2-209ENST00000486016 GNG4P50150 75 aa-0.41□□□□□ -2.48
GCFC2-209ENST00000486016 UBE2D3P61077 147 aa-0.41□□□□□ -2.48
GCFC2-209ENST00000486016 UBE2D2P62837 147 aa-0.41□□□□□ -2.48
GCFC2-209ENST00000486016 SVBPQ8N300 66 aa-0.41□□□□□ -2.48
GCFC2-209ENST00000486016 FDCSPQ8NFU4 85 aa-0.41□□□□□ -2.48
GCFC2-209ENST00000486016 LINC01600Q96MT4 127 aa-0.41□□□□□ -2.48
GCFC2-209ENST00000486016 TCHHQ07283 1943 aa-0.41□□□□□ -2.48
GCFC2-209ENST00000486016 DCHS2Q6V1P9 2916 aa-0.41□□□□□ -2.48
GCFC2-209ENST00000486016 LOC730098B7Z3J9 87 aa-0.42□□□□□ -2.48
GCFC2-209ENST00000486016 SPRR2BP35325 72 aa-0.42□□□□□ -2.48
GCFC2-209ENST00000486016 PPP3R1P63098 170 aa-0.42□□□□□ -2.48
GCFC2-209ENST00000486016 FXYD6Q9H0Q3 95 aa-0.42□□□□□ -2.48
GCFC2-209ENST00000486016 WNK1Q9H4A3 2382 aa-0.42□□□□□ -2.48
GCFC2-209ENST00000486016 ZANQ9Y493 2812 aa-0.42□□□□□ -2.48
GCFC2-209ENST00000486016 APC2O95996 2303 aa-0.43□□□□□ -2.48
GCFC2-209ENST00000486016 NAP1L6A6NFF2 107 aa-0.43□□□□□ -2.48
GCFC2-209ENST00000486016 FAM223BA6NKX1 122 aa-0.43□□□□□ -2.48
GCFC2-209ENST00000486016 COX6CP09669 75 aa-0.43□□□□□ -2.48
GCFC2-209ENST00000486016 TRAPPC2P0DI81 140 aa-0.43□□□□□ -2.48
GCFC2-209ENST00000486016 TRAPPC2BP0DI82 140 aa-0.43□□□□□ -2.48
GCFC2-209ENST00000486016 LCN9Q8WX39 176 aa-0.43□□□□□ -2.48
GCFC2-209ENST00000486016 PRO1854Q9UHT4 67 aa-0.43□□□□□ -2.48
GCFC2-209ENST00000486016 SPTA1P02549 2419 aa-0.43□□□□□ -2.48
GCFC2-209ENST00000486016 EP300Q09472 2414 aaPredicted RBP-0.43□□□□□ -2.48
GCFC2-209ENST00000486016 ADGRL2O95490 1459 aa-0.43□□□□□ -2.48
GCFC2-209ENST00000486016 SCN7AQ01118 1682 aa-0.43□□□□□ -2.48
GCFC2-209ENST00000486016 ALMS1Q8TCU4 4167 aa-0.44□□□□□ -2.48
GCFC2-209ENST00000486016 DIP2CQ9Y2E4 1556 aa-0.44□□□□□ -2.48
GCFC2-209ENST00000486016 A0A1B0GWA3 101 aa-0.44□□□□□ -2.48
GCFC2-209ENST00000486016 SPINK4O60575 86 aa-0.44□□□□□ -2.48
GCFC2-209ENST00000486016 S100A1P23297 94 aa-0.44□□□□□ -2.48
GCFC2-209ENST00000486016 PRO1933Q9H354 126 aa-0.44□□□□□ -2.48
GCFC2-209ENST00000486016 C1orf167Q5SNV9 1468 aa-0.44□□□□□ -2.48
GCFC2-209ENST00000486016 KIAA0556O60303 1618 aa-0.45□□□□□ -2.48
GCFC2-209ENST00000486016 KLK9Q2XQG4 91 aa-0.45□□□□□ -2.48
GCFC2-209ENST00000486016 DEFB105AQ8NG35 78 aa-0.45□□□□□ -2.48
GCFC2-209ENST00000486016 C12orf57Q99622 126 aa-0.45□□□□□ -2.48
GCFC2-209ENST00000486016 C2orf88Q9BSF0 95 aa-0.45□□□□□ -2.48
GCFC2-209ENST00000486016 GNG8Q9UK08 70 aa-0.45□□□□□ -2.48
GCFC2-209ENST00000486016 ATRQ13535 2644 aa-0.45□□□□□ -2.48
GCFC2-209ENST00000486016 NRKQ7Z2Y5 1582 aa-0.45□□□□□ -2.48
GCFC2-209ENST00000486016 SETBP1Q9Y6X0 1596 aa-0.45□□□□□ -2.48
GCFC2-209ENST00000486016 PZPP20742 1482 aa-0.46□□□□□ -2.48
GCFC2-209ENST00000486016 ARHGAP5Q13017 1502 aa-0.46□□□□□ -2.48
GCFC2-209ENST00000486016 CRYM-AS1A6NIL9 109 aa-0.46□□□□□ -2.48
GCFC2-209ENST00000486016 EIF4G3O43432 1585 aaKnown RBP-0.46□□□□□ -2.48
GCFC2-209ENST00000486016 TOP2BQ02880 1626 aa-0.46□□□□□ -2.48
GCFC2-209ENST00000486016 URB1O60287 2271 aaKnown RBP-0.47□□□□□ -2.48
GCFC2-209ENST00000486016 MRC2Q9UBG0 1479 aa-0.47□□□□□ -2.48
GCFC2-209ENST00000486016 FAT2Q9NYQ8 4349 aa-0.47□□□□□ -2.48
GCFC2-209ENST00000486016 LINC00587B1AMM8 73 aa-0.47□□□□□ -2.48
GCFC2-209ENST00000486016 H3BQ15 152 aa-0.47□□□□□ -2.48
GCFC2-209ENST00000486016 SYS1-DBNDD2H3BUS1 97 aa-0.47□□□□□ -2.48
GCFC2-209ENST00000486016 SAA2P0DJI9 122 aaPredicted RBP-0.47□□□□□ -2.48
GCFC2-209ENST00000486016 SNCAP37840 140 aa-0.47□□□□□ -2.48
GCFC2-209ENST00000486016 SARNPP82979 210 aaKnown RBP-0.47□□□□□ -2.48
GCFC2-209ENST00000486016 TMEM203Q969S6 136 aa-0.47□□□□□ -2.48
GCFC2-209ENST00000486016 CHD8Q9HCK8 2581 aa-0.47□□□□□ -2.48
GCFC2-209ENST00000486016 MUC2Q02817 5179 aa-0.47□□□□□ -2.48
GCFC2-209ENST00000486016 MAPKBP1O60336 1514 aa-0.48□□□□□ -2.49
GCFC2-209ENST00000486016 COL6A3P12111 3177 aa-0.48□□□□□ -2.49
GCFC2-209ENST00000486016 COX8AP10176 69 aa-0.48□□□□□ -2.49
GCFC2-209ENST00000486016 USMG5Q96IX5 58 aa-0.48□□□□□ -2.49
GCFC2-209ENST00000486016 LINC00846Q9NV44 126 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 223.2 ms