RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 H3BUT2 72 aa3.19□□□□□ -1.9
SPTA1-207ENST00000485680 K7EP13 123 aa3.19□□□□□ -1.9
SPTA1-207ENST00000485680 K7EP34 96 aa3.19□□□□□ -1.9
SPTA1-207ENST00000485680 IGLV1-51P01701 117 aa3.19□□□□□ -1.9
SPTA1-207ENST00000485680 RBMY1A1P0DJD3 496 aaKnown RBP3.19□□□□□ -1.9
SPTA1-207ENST00000485680 RBMY1CP0DJD4 496 aa3.19□□□□□ -1.9
SPTA1-207ENST00000485680 TCTAP57738 103 aa3.19□□□□□ -1.9
SPTA1-207ENST00000485680 RPL39P62891 51 aaKnown RBP3.19□□□□□ -1.9
SPTA1-207ENST00000485680 MRPS36P82909 103 aaKnown RBP3.19□□□□□ -1.9
SPTA1-207ENST00000485680 RBMY1FQ15415 496 aaKnown RBP3.19□□□□□ -1.9
SPTA1-207ENST00000485680 RRN3P1Q2M238 152 aa3.19□□□□□ -1.9
SPTA1-207ENST00000485680 AMELXQ99217 191 aa3.19□□□□□ -1.9
SPTA1-207ENST00000485680 TIMM21Q9BVV7 248 aa3.19□□□□□ -1.9
SPTA1-207ENST00000485680 SPANXB1Q9NS25 103 aaPredicted RBP3.19□□□□□ -1.9
SPTA1-207ENST00000485680 TP73-AS1Q9UF72 201 aa3.19□□□□□ -1.9
SPTA1-207ENST00000485680 CBY1Q9Y3M2 126 aa3.19□□□□□ -1.9
SPTA1-207ENST00000485680 USP9YO00507 2555 aaPredicted RBP3.19□□□□□ -1.9
SPTA1-207ENST00000485680 LRRK2Q5S007 2527 aa3.19□□□□□ -1.9
SPTA1-207ENST00000485680 TRBV7-3A0A075B6L6 115 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 IGHV3-73A0A0B4J1V6 119 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 TINCRA0A1B0GVN0 87 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 TMEM223A0PJW6 202 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 TMEM238C9JI98 176 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 J3QQQ9 107 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 K7ERU9 68 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 P0DMU3 169 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 FAM231AP0DMU4 169 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 FAM231CP0DMU5 169 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 FXYD2P54710 66 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 C12orf74Q32Q52 190 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 KRTAP13-3Q3SY46 172 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 Q6ZVH6 145 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 C1orf158Q8N1D5 194 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 COPS9Q8WXC6 57 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 RAB37Q96AX2 223 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 TMEM101Q96IK0 257 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 GEMIN7Q9H840 131 aaKnown RBP3.18□□□□□ -1.9
SPTA1-207ENST00000485680 MRPL16Q9NX20 251 aaKnown RBP3.18□□□□□ -1.9
SPTA1-207ENST00000485680 NHP2Q9NX24 153 aaKnown RBP3.18□□□□□ -1.9
SPTA1-207ENST00000485680 CSDC2Q9Y534 153 aaKnown RBP3.18□□□□□ -1.9
SPTA1-207ENST00000485680 SPCS1Q9Y6A9 102 aa3.18□□□□□ -1.9
SPTA1-207ENST00000485680 PTPN13Q12923 2485 aa3.17□□□□□ -1.9
SPTA1-207ENST00000485680 UTP20O75691 2785 aaKnown RBP3.17□□□□□ -1.9
SPTA1-207ENST00000485680 TRGV2A0A075B6R0 118 aa3.17□□□□□ -1.9
SPTA1-207ENST00000485680 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.17□□□□□ -1.9
SPTA1-207ENST00000485680 A0A0J9YY99 117 aa3.17□□□□□ -1.9
SPTA1-207ENST00000485680 TRBV6-4A0A1B0GX49 114 aa3.17□□□□□ -1.9
SPTA1-207ENST00000485680 SMIM9A6NGZ8 99 aa3.17□□□□□ -1.9
SPTA1-207ENST00000485680 IGLL5B9A064 214 aa3.17□□□□□ -1.9
SPTA1-207ENST00000485680 J3QR89 54 aa3.17□□□□□ -1.9
SPTA1-207ENST00000485680 UBE2L6O14933 153 aa3.17□□□□□ -1.9
SPTA1-207ENST00000485680 ZNF22P17026 224 aaPredicted RBP3.17□□□□□ -1.9
SPTA1-207ENST00000485680 HERVK_113P63121 156 aa3.17□□□□□ -1.9
SPTA1-207ENST00000485680 CIRBPQ14011 172 aaKnown RBP3.17□□□□□ -1.9
SPTA1-207ENST00000485680 SLC25A29Q8N8R3 303 aa3.17□□□□□ -1.9
SPTA1-207ENST00000485680 ZNRF2Q8NHG8 242 aa3.17□□□□□ -1.9
SPTA1-207ENST00000485680 CHCHD7Q9BUK0 85 aa3.17□□□□□ -1.9
SPTA1-207ENST00000485680 GTSF1LQ9H1H1 148 aa3.17□□□□□ -1.9
SPTA1-207ENST00000485680 UBE2D4Q9Y2X8 147 aa3.17□□□□□ -1.9
SPTA1-207ENST00000485680 MUC4Q99102 2169 aa3.17□□□□□ -1.9
SPTA1-207ENST00000485680 FBN2P35556 2912 aa3.16□□□□□ -1.9
SPTA1-207ENST00000485680 TRGV4A0A0C4DH28 118 aa3.16□□□□□ -1.9
SPTA1-207ENST00000485680 IGHV1-58A0A0C4DH39 117 aa3.16□□□□□ -1.9
SPTA1-207ENST00000485680 A0A0J9YXV3 536 aa3.16□□□□□ -1.9
SPTA1-207ENST00000485680 F8W1H4 67 aa3.16□□□□□ -1.9
SPTA1-207ENST00000485680 TIMM17BO60830 172 aa3.16□□□□□ -1.9
SPTA1-207ENST00000485680 EMP1P54849 157 aa3.16□□□□□ -1.9
SPTA1-207ENST00000485680 TTTY13Q9BZ97 58 aa3.16□□□□□ -1.9
SPTA1-207ENST00000485680 NOP10Q9NPE3 64 aaKnown RBP3.16□□□□□ -1.9
SPTA1-207ENST00000485680 ZFYVE26Q68DK2 2539 aa3.16□□□□□ -1.9
SPTA1-207ENST00000485680 CSMD1Q96PZ7 3565 aa3.15□□□□□ -1.9
SPTA1-207ENST00000485680 TRBV20-1A0A075B6N2 111 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.15□□□□□ -1.91
SPTA1-207ENST00000485680 A0A0J9YXY3 114 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 IGKV2-29A2NJV5 120 aaPredicted RBP3.15□□□□□ -1.91
SPTA1-207ENST00000485680 IGHV3-30P01768 117 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 IGHV3-30-3P0DP02 117 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 IGHV3-30-5P0DP03 117 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 IFITM1P13164 125 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 UBE2D1P51668 147 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 APOC4P55056 127 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 UBE2D3P61077 147 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 UBE2D2P62837 147 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 OCIAD2Q56VL3 154 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 CRYBG3Q68DQ2 2970 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 Q6ZTI0 123 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 FAM19A3Q7Z5A8 133 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 KIR2DL5BQ8NHK3 375 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 CHCHD10Q8WYQ3 142 aaPredicted RBP3.15□□□□□ -1.91
SPTA1-207ENST00000485680 TMEM243Q9BU79 118 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 VPS13CQ709C8 3753 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 CELSR2Q9HCU4 2923 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 SVEP1Q4LDE5 3571 aa3.15□□□□□ -1.91
SPTA1-207ENST00000485680 DOPEY2Q9Y3R5 2298 aa3.14□□□□□ -1.91
SPTA1-207ENST00000485680 CELSR1Q9NYQ6 3014 aa3.14□□□□□ -1.91
SPTA1-207ENST00000485680 A0A0B4J2C4 111 aa3.14□□□□□ -1.91
SPTA1-207ENST00000485680 LYRM9A8MSI8 78 aa3.14□□□□□ -1.91
SPTA1-207ENST00000485680 PRM2P04554 102 aa3.14□□□□□ -1.91
SPTA1-207ENST00000485680 DNAH10OSP0CZ25 163 aa3.14□□□□□ -1.91
SPTA1-207ENST00000485680 ZFAND6Q6FIF0 208 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms