RNA–Protein interactions for RNA: ENST00000483060.1

SGIP1-210, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-210ENST00000483060 MRPL55Q7Z7F7 128 aaKnown RBP3.97□□□□□ -1.77
SGIP1-210ENST00000483060 STHQ8IWL8 128 aa3.97□□□□□ -1.77
SGIP1-210ENST00000483060 C6orf223Q8N319 242 aa3.97□□□□□ -1.77
SGIP1-210ENST00000483060 WFDC11Q8NEX6 87 aa3.97□□□□□ -1.77
SGIP1-210ENST00000483060 FDCSPQ8NFU4 85 aa3.97□□□□□ -1.77
SGIP1-210ENST00000483060 COX7B2Q8TF08 81 aa3.97□□□□□ -1.77
SGIP1-210ENST00000483060 SIRPDQ9H106 197 aa3.97□□□□□ -1.77
SGIP1-210ENST00000483060 MALRD1Q5VYJ5 2156 aa3.97□□□□□ -1.77
SGIP1-210ENST00000483060 ARFGEF3Q5TH69 2177 aa3.96□□□□□ -1.78
SGIP1-210ENST00000483060 E7EQL1 145 aa3.96□□□□□ -1.78
SGIP1-210ENST00000483060 NDUFS5O43920 106 aa3.96□□□□□ -1.78
SGIP1-210ENST00000483060 NDUFB1O75438 58 aa3.96□□□□□ -1.78
SGIP1-210ENST00000483060 FUSP35637 526 aaKnown RBP eCLIP3.96□□□□□ -1.78
SGIP1-210ENST00000483060 LINC01547P58512 204 aaPredicted RBP3.96□□□□□ -1.78
SGIP1-210ENST00000483060 Q6ZQT0 140 aa3.96□□□□□ -1.78
SGIP1-210ENST00000483060 FAM19A1Q7Z5A9 133 aa3.96□□□□□ -1.78
SGIP1-210ENST00000483060 SMIM29Q86T20 159 aa3.96□□□□□ -1.78
SGIP1-210ENST00000483060 LINC00337Q8N6G1 96 aa3.96□□□□□ -1.78
SGIP1-210ENST00000483060 C5orf56Q8N8D9 126 aa3.96□□□□□ -1.78
SGIP1-210ENST00000483060 TMEM254Q8TBM7 123 aa3.96□□□□□ -1.78
SGIP1-210ENST00000483060 NACAE9PAV3 2078 aa3.95□□□□□ -1.78
SGIP1-210ENST00000483060 IGKV2-28A0A075B6P5 120 aa3.95□□□□□ -1.78
SGIP1-210ENST00000483060 IGHV3OR16-12A0A075B7B8 117 aa3.95□□□□□ -1.78
SGIP1-210ENST00000483060 IGKV2-29A2NJV5 120 aaPredicted RBP3.95□□□□□ -1.78
SGIP1-210ENST00000483060 NCR3O14931 201 aa3.95□□□□□ -1.78
SGIP1-210ENST00000483060 IGKV2D-28P01615 120 aa3.95□□□□□ -1.78
SGIP1-210ENST00000483060 NBL1P41271 181 aa3.95□□□□□ -1.78
SGIP1-210ENST00000483060 LINC00158P58513 81 aa3.95□□□□□ -1.78
SGIP1-210ENST00000483060 CDC42SE2Q9NRR3 84 aa3.95□□□□□ -1.78
SGIP1-210ENST00000483060 IGHV3OR16-13A0A075B7E8 117 aa3.94□□□□□ -1.78
SGIP1-210ENST00000483060 IGHV3OR16-8A0A075B7F1 116 aa3.94□□□□□ -1.78
SGIP1-210ENST00000483060 IGHV3-74A0A0B4J1X5 117 aa3.94□□□□□ -1.78
SGIP1-210ENST00000483060 K7EQG2 157 aa3.94□□□□□ -1.78
SGIP1-210ENST00000483060 UBE2L6O14933 153 aa3.94□□□□□ -1.78
SGIP1-210ENST00000483060 PRB4P10163 310 aaPredicted RBP3.94□□□□□ -1.78
SGIP1-210ENST00000483060 CCL18P55774 89 aa3.94□□□□□ -1.78
SGIP1-210ENST00000483060 NREPQ16612 68 aa3.94□□□□□ -1.78
SGIP1-210ENST00000483060 NTM-AS1Q6ZSK4 140 aa3.94□□□□□ -1.78
SGIP1-210ENST00000483060 BPESC1Q9GZL8 116 aa3.94□□□□□ -1.78
SGIP1-210ENST00000483060 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.93□□□□□ -1.78
SGIP1-210ENST00000483060 IGHV3-49A0A0A0MS15 119 aa3.93□□□□□ -1.78
SGIP1-210ENST00000483060 CCL24O00175 119 aa3.93□□□□□ -1.78
SGIP1-210ENST00000483060 SAA4P35542 130 aa3.93□□□□□ -1.78
SGIP1-210ENST00000483060 DAD1P61803 113 aa3.93□□□□□ -1.78
SGIP1-210ENST00000483060 UBE2BP63146 152 aa3.93□□□□□ -1.78
SGIP1-210ENST00000483060 HAMPP81172 84 aa3.93□□□□□ -1.78
SGIP1-210ENST00000483060 COX6A2Q02221 97 aa3.93□□□□□ -1.78
SGIP1-210ENST00000483060 SS18Q15532 418 aa3.93□□□□□ -1.78
SGIP1-210ENST00000483060 FBXL19-AS1Q494R0 122 aa3.93□□□□□ -1.78
SGIP1-210ENST00000483060 Q6ZVQ6 151 aa3.93□□□□□ -1.78
SGIP1-210ENST00000483060 MED13Q9UHV7 2174 aa3.93□□□□□ -1.78
SGIP1-210ENST00000483060 ZGRF1Q86YA3 2104 aa3.92□□□□□ -1.78
SGIP1-210ENST00000483060 A0A0U1RRA0 63 aa3.92□□□□□ -1.78
SGIP1-210ENST00000483060 BPY2O14599 106 aa3.92□□□□□ -1.78
SGIP1-210ENST00000483060 LY6HO94772 140 aa3.92□□□□□ -1.78
SGIP1-210ENST00000483060 IGHV4-31P0DP07 118 aa3.92□□□□□ -1.78
SGIP1-210ENST00000483060 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.92□□□□□ -1.78
SGIP1-210ENST00000483060 Q8IZM0 81 aa3.92□□□□□ -1.78
SGIP1-210ENST00000483060 TMEM105Q8N8V8 129 aa3.92□□□□□ -1.78
SGIP1-210ENST00000483060 RMI2Q96E14 147 aa3.92□□□□□ -1.78
SGIP1-210ENST00000483060 CYP4F30PQ9H0H9 118 aa3.92□□□□□ -1.78
SGIP1-210ENST00000483060 ESM1Q9NQ30 184 aa3.92□□□□□ -1.78
SGIP1-210ENST00000483060 PLXNB1O43157 2135 aa3.92□□□□□ -1.78
SGIP1-210ENST00000483060 CEP350Q5VT06 3117 aa3.92□□□□□ -1.78
SGIP1-210ENST00000483060 MUC4Q99102 2169 aa3.92□□□□□ -1.78
SGIP1-210ENST00000483060 G3V318 75 aa3.91□□□□□ -1.78
SGIP1-210ENST00000483060 IGHV4-59P01825 116 aa3.91□□□□□ -1.78
SGIP1-210ENST00000483060 VPREB1P12018 145 aa3.91□□□□□ -1.78
SGIP1-210ENST00000483060 CENPFP49454 3210 aa3.91□□□□□ -1.78
SGIP1-210ENST00000483060 CMC4P56277 68 aaPredicted RBP3.91□□□□□ -1.78
SGIP1-210ENST00000483060 ELOF1P60002 83 aaKnown RBP3.91□□□□□ -1.78
SGIP1-210ENST00000483060 UNQ9165/PRO28630Q6UXU0 137 aa3.91□□□□□ -1.78
SGIP1-210ENST00000483060 LINC00575Q6W349 94 aa3.91□□□□□ -1.78
SGIP1-210ENST00000483060 GOLGB1Q14789 3259 aaKnown RBP3.9□□□□□ -1.78
SGIP1-210ENST00000483060 IGHV3-38A0A0C4DH36 116 aa3.9□□□□□ -1.79
SGIP1-210ENST00000483060 A0A1W2PNU3 283 aaPredicted RBP3.9□□□□□ -1.79
SGIP1-210ENST00000483060 hDV103S1A0JD37 113 aa3.9□□□□□ -1.79
SGIP1-210ENST00000483060 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.9□□□□□ -1.79
SGIP1-210ENST00000483060 LIMD2Q9BT23 127 aa3.9□□□□□ -1.79
SGIP1-210ENST00000483060 LINC00474Q9P2X8 69 aa3.9□□□□□ -1.79
SGIP1-210ENST00000483060 SNURFQ9Y675 71 aa3.9□□□□□ -1.79
SGIP1-210ENST00000483060 IGHV4-30-2A0A087WSY4 118 aa3.89□□□□□ -1.79
SGIP1-210ENST00000483060 IGHV3OR16-9A0A0B4J2B5 98 aa3.89□□□□□ -1.79
SGIP1-210ENST00000483060 LCE6AA0A183 80 aa3.89□□□□□ -1.79
SGIP1-210ENST00000483060 INSP01308 110 aa3.89□□□□□ -1.79
SGIP1-210ENST00000483060 COX7BP24311 80 aa3.89□□□□□ -1.79
SGIP1-210ENST00000483060 UBE2AP49459 152 aa3.89□□□□□ -1.79
SGIP1-210ENST00000483060 LPAL2Q16609 132 aa3.89□□□□□ -1.79
SGIP1-210ENST00000483060 SPINK13Q1W4C9 94 aa3.89□□□□□ -1.79
SGIP1-210ENST00000483060 C9orf129Q5T035 196 aaKnown RBP3.89□□□□□ -1.79
SGIP1-210ENST00000483060 ATP11AUNQ6ZP68 121 aa3.89□□□□□ -1.79
SGIP1-210ENST00000483060 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
SGIP1-210ENST00000483060 TM2D3Q9BRN9 247 aa3.89□□□□□ -1.79
SGIP1-210ENST00000483060 TRAV10A0A0B4J240 114 aa3.88□□□□□ -1.79
SGIP1-210ENST00000483060 H3BPC8 53 aa3.88□□□□□ -1.79
SGIP1-210ENST00000483060 LMO4P61968 165 aa3.88□□□□□ -1.79
SGIP1-210ENST00000483060 RNASE13Q5GAN3 156 aaKnown RBP3.88□□□□□ -1.79
SGIP1-210ENST00000483060 LCE3AQ5TA76 89 aa3.88□□□□□ -1.79
SGIP1-210ENST00000483060 PHF5AQ7RTV0 110 aaKnown RBP3.88□□□□□ -1.79
SGIP1-210ENST00000483060 OCR1Q9BZK8 76 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms